RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
DHFR-204ENST00000508282 POM121Q96HA1 1249 aa10.98□□□□□ -0.65
DHFR-204ENST00000508282 COG6Q9Y2V7 657 aa10.98□□□□□ -0.65
DHFR-204ENST00000508282 CAPN5O15484 640 aaPredicted RBP10.97□□□□□ -0.65
DHFR-204ENST00000508282 TIMP2P16035 220 aa10.97□□□□□ -0.65
DHFR-204ENST00000508282 ABL2P42684 1182 aa10.97□□□□□ -0.65
DHFR-204ENST00000508282 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
DHFR-204ENST00000508282 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
DHFR-204ENST00000508282 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
DHFR-204ENST00000508282 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
DHFR-204ENST00000508282 CCDC116Q8IYX3 515 aa10.95□□□□□ -0.66
DHFR-204ENST00000508282 ITPKCQ96DU7 683 aa10.95□□□□□ -0.66
DHFR-204ENST00000508282 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
DHFR-204ENST00000508282 ZIC2O95409 532 aaPredicted RBP10.94□□□□□ -0.66
DHFR-204ENST00000508282 ESPNB1AK53 854 aa10.93□□□□□ -0.66
DHFR-204ENST00000508282 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
DHFR-204ENST00000508282 ATP13A2Q9NQ11 1180 aa10.93□□□□□ -0.66
DHFR-204ENST00000508282 POTECB2RU33 542 aa10.92□□□□□ -0.66
DHFR-204ENST00000508282 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
DHFR-204ENST00000508282 VAC14Q08AM6 782 aa10.92□□□□□ -0.66
DHFR-204ENST00000508282 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
DHFR-204ENST00000508282 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
DHFR-204ENST00000508282 BMP1P13497 986 aa10.91□□□□□ -0.66
DHFR-204ENST00000508282 RAB15P59190 212 aa10.91□□□□□ -0.66
DHFR-204ENST00000508282 EMILIN1Q9Y6C2 1016 aa10.91□□□□□ -0.66
DHFR-204ENST00000508282 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
DHFR-204ENST00000508282 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
DHFR-204ENST00000508282 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
DHFR-204ENST00000508282 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
DHFR-204ENST00000508282 ERVH48-1M5A8F1 160 aa10.88□□□□□ -0.67
DHFR-204ENST00000508282 RAD21O60216 631 aa10.88□□□□□ -0.67
DHFR-204ENST00000508282 WASHC4Q2M389 1173 aa10.88□□□□□ -0.67
DHFR-204ENST00000508282 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
DHFR-204ENST00000508282 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
DHFR-204ENST00000508282 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
DHFR-204ENST00000508282 ZNF592Q92610 1267 aa10.87□□□□□ -0.67
DHFR-204ENST00000508282 TMPRSS4Q9NRS4 437 aa10.87□□□□□ -0.67
DHFR-204ENST00000508282 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
DHFR-204ENST00000508282 CBLBQ13191 982 aa10.85□□□□□ -0.67
DHFR-204ENST00000508282 MRPL14Q6P1L8 145 aaKnown RBP10.85□□□□□ -0.67
DHFR-204ENST00000508282 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
DHFR-204ENST00000508282 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
DHFR-204ENST00000508282 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
DHFR-204ENST00000508282 MEIOBQ8N635 442 aa10.84□□□□□ -0.67
DHFR-204ENST00000508282 LILRA1O75019 489 aa10.83□□□□□ -0.68
DHFR-204ENST00000508282 Q6ZVU0 165 aa10.83□□□□□ -0.68
DHFR-204ENST00000508282 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
DHFR-204ENST00000508282 TRIM47Q96LD4 638 aa10.82□□□□□ -0.68
DHFR-204ENST00000508282 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
DHFR-204ENST00000508282 WWC1Q8IX03 1113 aa10.81□□□□□ -0.68
DHFR-204ENST00000508282 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
DHFR-204ENST00000508282 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
DHFR-204ENST00000508282 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
DHFR-204ENST00000508282 SNRPBP14678 240 aaKnown RBP10.8□□□□□ -0.68
DHFR-204ENST00000508282 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
DHFR-204ENST00000508282 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
DHFR-204ENST00000508282 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
DHFR-204ENST00000508282 PHTF2Q8N3S3 785 aa10.8□□□□□ -0.68
DHFR-204ENST00000508282 CYLDQ9NQC7 956 aa10.8□□□□□ -0.68
DHFR-204ENST00000508282 POM121CA8CG34 1229 aa10.79□□□□□ -0.68
DHFR-204ENST00000508282 SOX11P35716 441 aa10.79□□□□□ -0.68
DHFR-204ENST00000508282 SEMA3FQ13275 785 aa10.79□□□□□ -0.68
DHFR-204ENST00000508282 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
DHFR-204ENST00000508282 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
DHFR-204ENST00000508282 SCARF1Q14162 830 aa10.78□□□□□ -0.68
DHFR-204ENST00000508282 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
DHFR-204ENST00000508282 KIFC2Q96AC6 838 aa10.78□□□□□ -0.68
DHFR-204ENST00000508282 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
DHFR-204ENST00000508282 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
DHFR-204ENST00000508282 PCDHB11Q9Y5F2 797 aa10.78□□□□□ -0.68
DHFR-204ENST00000508282 BMP2P12643 396 aa10.77□□□□□ -0.69
DHFR-204ENST00000508282 ERVK-9P63128 1117 aa10.77□□□□□ -0.69
DHFR-204ENST00000508282 TSGA10IPQ3SY00 556 aa10.77□□□□□ -0.69
DHFR-204ENST00000508282 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
DHFR-204ENST00000508282 ALG2Q9H553 416 aa10.77□□□□□ -0.69
DHFR-204ENST00000508282 A6NJR5 290 aa10.76□□□□□ -0.69
DHFR-204ENST00000508282 UPP2O95045 317 aa10.76□□□□□ -0.69
DHFR-204ENST00000508282 SCTRP47872 440 aa10.76□□□□□ -0.69
DHFR-204ENST00000508282 SLFNL1Q499Z3 407 aa10.76□□□□□ -0.69
DHFR-204ENST00000508282 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
DHFR-204ENST00000508282 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
DHFR-204ENST00000508282 ADH1AP07327 375 aa10.75□□□□□ -0.69
DHFR-204ENST00000508282 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
DHFR-204ENST00000508282 CDCA7Q9BWT1 371 aaPredicted RBP10.75□□□□□ -0.69
DHFR-204ENST00000508282 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
DHFR-204ENST00000508282 RELBQ01201 579 aa10.74□□□□□ -0.69
DHFR-204ENST00000508282 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
DHFR-204ENST00000508282 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
DHFR-204ENST00000508282 PIK3CDO00329 1044 aa10.73□□□□□ -0.69
DHFR-204ENST00000508282 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
DHFR-204ENST00000508282 SPINT1O43278 529 aa10.72□□□□□ -0.69
DHFR-204ENST00000508282 ZNF395Q9H8N7 513 aaPredicted RBP10.72□□□□□ -0.69
DHFR-204ENST00000508282 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
DHFR-204ENST00000508282 DOLKQ9UPQ8 538 aa10.71□□□□□ -0.69
DHFR-204ENST00000508282 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
DHFR-204ENST00000508282 SOBPA7XYQ1 873 aa10.7□□□□□ -0.7
DHFR-204ENST00000508282 PTGIRP43119 386 aa10.7□□□□□ -0.7
DHFR-204ENST00000508282 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
DHFR-204ENST00000508282 ATP5J2-PTCD1G3V325 749 aa10.69□□□□□ -0.7
DHFR-204ENST00000508282 TRAK2O60296 914 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms