RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	AATK	Q6ZMQ8	1374 aa		13.52	□□□□□ -0.25
UBE2D3-223	ENST00000508249	RAB3GAP2	Q9H2M9	1393 aa		13.52	□□□□□ -0.25
UBE2D3-223	ENST00000508249	MAP3K5	Q99683	1374 aa		13.51	□□□□□ -0.25
UBE2D3-223	ENST00000508249	ACE	P12821	1306 aa		13.51	□□□□□ -0.25
UBE2D3-223	ENST00000508249	TRPM1	Q7Z4N2	1603 aa		13.5	□□□□□ -0.25
UBE2D3-223	ENST00000508249	BTAF1	O14981	1849 aa		13.5	□□□□□ -0.25
UBE2D3-223	ENST00000508249	DCAF8L1	A6NGE4	600 aa		13.49	□□□□□ -0.25
UBE2D3-223	ENST00000508249	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-223	ENST00000508249	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-223	ENST00000508249	KIAA1210	Q9ULL0	1709 aa		13.49	□□□□□ -0.25
UBE2D3-223	ENST00000508249	QRICH2	Q9H0J4	1663 aa		13.48	□□□□□ -0.25
UBE2D3-223	ENST00000508249	EVA1C	P58658	441 aa		13.48	□□□□□ -0.25
UBE2D3-223	ENST00000508249	MARCH10	Q8NA82	808 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2D3-223	ENST00000508249	PLEKHG3	A1L390	1219 aa		13.47	□□□□□ -0.25
UBE2D3-223	ENST00000508249	ABCC6	O95255	1503 aa		13.46	□□□□□ -0.25
UBE2D3-223	ENST00000508249	C11orf95	C9JLR9	678 aa	Predicted RBP	13.46	□□□□□ -0.25
UBE2D3-223	ENST00000508249	GC	P02774	474 aa		13.46	□□□□□ -0.25
UBE2D3-223	ENST00000508249	SLC15A2	Q16348	729 aa		13.45	□□□□□ -0.26
UBE2D3-223	ENST00000508249	TXNRD1	Q16881	649 aa		13.45	□□□□□ -0.26
UBE2D3-223	ENST00000508249	CPSF1	Q10570	1443 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-223	ENST00000508249	TNS2	Q63HR2	1409 aa		13.45	□□□□□ -0.26
UBE2D3-223	ENST00000508249	NFAT5	O94916	1531 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	DDB1	Q16531	1140 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	ABTB2	Q8N961	1025 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	CDK19	Q9BWU1	502 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	MTFR1L	Q9H019	292 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	PPIP5K1	Q6PFW1	1433 aa		13.44	□□□□□ -0.26
UBE2D3-223	ENST00000508249	USP6	P35125	1406 aa		13.43	□□□□□ -0.26
UBE2D3-223	ENST00000508249	AXIN2	Q9Y2T1	843 aa		13.43	□□□□□ -0.26
UBE2D3-223	ENST00000508249	CCDC61	Q9Y6R9	512 aa		13.43	□□□□□ -0.26
UBE2D3-223	ENST00000508249	WDR17	Q8IZU2	1322 aa		13.42	□□□□□ -0.26
UBE2D3-223	ENST00000508249	USP54	Q70EL1	1684 aa		13.41	□□□□□ -0.26
UBE2D3-223	ENST00000508249	ZNF827	Q17R98	1081 aa		13.4	□□□□□ -0.26
UBE2D3-223	ENST00000508249	STK32B	Q9NY57	414 aa		13.4	□□□□□ -0.26
UBE2D3-223	ENST00000508249	LY75	O60449	1722 aa		13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	GIGYF1	O75420	1035 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	TRIM26	Q12899	539 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	NLRP13	Q86W25	1043 aa		13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	ARX	Q96QS3	562 aa		13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	BRD4	O60885	1362 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE2D3-223	ENST00000508249	DCAF11	Q8TEB1	546 aa		13.38	□□□□□ -0.27
UBE2D3-223	ENST00000508249	LTN1	O94822	1766 aa		13.37	□□□□□ -0.27
UBE2D3-223	ENST00000508249	MON2	Q7Z3U7	1717 aa		13.37	□□□□□ -0.27
UBE2D3-223	ENST00000508249	TOM1L2	Q6ZVM7	507 aa		13.37	□□□□□ -0.27
UBE2D3-223	ENST00000508249	KDM2A	Q9Y2K7	1162 aa		13.37	□□□□□ -0.27
UBE2D3-223	ENST00000508249	STAC3	Q96MF2	364 aa		13.36	□□□□□ -0.27
UBE2D3-223	ENST00000508249	LRRC4B	Q9NT99	713 aa		13.36	□□□□□ -0.27
UBE2D3-223	ENST00000508249	ARHGEF25	Q86VW2	580 aa		13.35	□□□□□ -0.27
UBE2D3-223	ENST00000508249	CARD10	Q9BWT7	1032 aa		13.35	□□□□□ -0.27
UBE2D3-223	ENST00000508249	DOT1L	Q8TEK3	1739 aa		13.35	□□□□□ -0.27
UBE2D3-223	ENST00000508249	NLGN2	Q8NFZ4	835 aa		13.34	□□□□□ -0.27
UBE2D3-223	ENST00000508249	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE2D3-223	ENST00000508249	ADCY9	O60503	1353 aa		13.33	□□□□□ -0.27
UBE2D3-223	ENST00000508249	ZBTB7C	A1YPR0	619 aa		13.33	□□□□□ -0.28
UBE2D3-223	ENST00000508249	AKT1S1	Q96B36	256 aa		13.33	□□□□□ -0.28
UBE2D3-223	ENST00000508249	YBX3	P16989	372 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
UBE2D3-223	ENST00000508249	NLRP6	P59044	892 aa		13.32	□□□□□ -0.28
UBE2D3-223	ENST00000508249	CABP2	Q9NPB3	220 aa		13.32	□□□□□ -0.28
UBE2D3-223	ENST00000508249	PNPLA7	Q6ZV29	1317 aa		13.32	□□□□□ -0.28
UBE2D3-223	ENST00000508249	CCDC7	Q96M83	1385 aa		13.32	□□□□□ -0.28
UBE2D3-223	ENST00000508249	ATP10D	Q9P241	1426 aa		13.31	□□□□□ -0.28
UBE2D3-223	ENST00000508249	GPR162	Q16538	588 aa		13.31	□□□□□ -0.28
UBE2D3-223	ENST00000508249	NBPF1	Q3BBV0	1214 aa		13.3	□□□□□ -0.28
UBE2D3-223	ENST00000508249	ACSBG1	Q96GR2	724 aa		13.3	□□□□□ -0.28
UBE2D3-223	ENST00000508249	FAM208A	Q9UK61	1670 aa	Known RBP	13.3	□□□□□ -0.28
UBE2D3-223	ENST00000508249	CABP1	Q9NZU7	370 aa		13.29	□□□□□ -0.28
UBE2D3-223	ENST00000508249	TOGARAM1	Q9Y4F4	1720 aa		13.29	□□□□□ -0.28
UBE2D3-223	ENST00000508249	NSD2	O96028	1365 aa		13.29	□□□□□ -0.28
UBE2D3-223	ENST00000508249	KAT6B	Q8WYB5	2073 aa		13.28	□□□□□ -0.28
UBE2D3-223	ENST00000508249	TAF1L	Q8IZX4	1826 aa		13.28	□□□□□ -0.28
UBE2D3-223	ENST00000508249	SRPK2	P78362	688 aa	Known RBP	13.28	□□□□□ -0.28
UBE2D3-223	ENST00000508249	C5	P01031	1676 aa		13.28	□□□□□ -0.28
UBE2D3-223	ENST00000508249	EXOC5	O00471	708 aa		13.27	□□□□□ -0.29
UBE2D3-223	ENST00000508249	ERBB3	P21860	1342 aa		13.27	□□□□□ -0.29
UBE2D3-223	ENST00000508249	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.27	□□□□□ -0.29
UBE2D3-223	ENST00000508249	RGPD2	P0DJD1	1756 aa		13.27	□□□□□ -0.29
UBE2D3-223	ENST00000508249	PCNT	O95613	3336 aa		13.26	□□□□□ -0.29
UBE2D3-223	ENST00000508249	TTC21B	Q7Z4L5	1316 aa		13.26	□□□□□ -0.29
UBE2D3-223	ENST00000508249	SLC16A10	Q8TF71	515 aa		13.26	□□□□□ -0.29
UBE2D3-223	ENST00000508249	CIC	Q96RK0	1608 aa	Predicted RBP	13.25	□□□□□ -0.29
UBE2D3-223	ENST00000508249	CD163L1	Q9NR16	1453 aa		13.24	□□□□□ -0.29
UBE2D3-223	ENST00000508249	KLHL34	Q8N239	644 aa		13.24	□□□□□ -0.29
UBE2D3-223	ENST00000508249	KIAA1551	Q9HCM1	1747 aa		13.24	□□□□□ -0.29
UBE2D3-223	ENST00000508249	SOX12	O15370	315 aa		13.23	□□□□□ -0.29
UBE2D3-223	ENST00000508249	CSB-PGBD3	P0DP91	1061 aa		13.23	□□□□□ -0.29
UBE2D3-223	ENST00000508249	HSPA6	P17066	643 aa		13.23	□□□□□ -0.29
UBE2D3-223	ENST00000508249	KCNQ4	P56696	695 aa		13.23	□□□□□ -0.29
UBE2D3-223	ENST00000508249	PELP1	Q8IZL8	1130 aa	Known RBP	13.23	□□□□□ -0.29
UBE2D3-223	ENST00000508249	KCNH5	Q8NCM2	988 aa		13.22	□□□□□ -0.29
UBE2D3-223	ENST00000508249	USP31	Q70CQ4	1352 aa		13.21	□□□□□ -0.29
UBE2D3-223	ENST00000508249	TTC21A	Q8NDW8	1320 aa		13.21	□□□□□ -0.29
UBE2D3-223	ENST00000508249	UBR3	Q6ZT12	1888 aa		13.21	□□□□□ -0.3
UBE2D3-223	ENST00000508249	WDR90	Q96KV7	1748 aa		13.2	□□□□□ -0.3
UBE2D3-223	ENST00000508249	IL2RB	P14784	551 aa		13.2	□□□□□ -0.3
UBE2D3-223	ENST00000508249	POLD1	P28340	1107 aa		13.2	□□□□□ -0.3
UBE2D3-223	ENST00000508249	SLC27A3	Q5K4L6	730 aa		13.2	□□□□□ -0.3
UBE2D3-223	ENST00000508249	ANKRD36B	Q8N2N9	1353 aa		13.19	□□□□□ -0.3
UBE2D3-223	ENST00000508249	SBNO2	Q9Y2G9	1366 aa		13.19	□□□□□ -0.3
UBE2D3-223	ENST00000508249	KIF13B	Q9NQT8	1826 aa		13.18	□□□□□ -0.3
UBE2D3-223	ENST00000508249	GRIN3B	O60391	1043 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms