RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 KLF15Q9UIH9 416 aa9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 PDGFRBP09619 1106 aa9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 ODR4Q5SWX8 454 aa9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 PDILTQ8N807 584 aa9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
PDGFRA-206ENST00000508170 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 DNAJC6O75061 913 aa9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 FCHSD2O94868 740 aa9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 TNNI2P48788 182 aa9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 ALG2Q9H553 416 aa9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
PDGFRA-206ENST00000508170 DCAF1Q9Y4B6 1507 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 GOLIM4O00461 696 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 MMP14P50281 582 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 TTC39BQ5VTQ0 682 aaPredicted RBP9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 C8orf48Q96LL4 319 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 MPHOSPH6Q99547 160 aaKnown RBP9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 CCSER2Q9H7U1 834 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 AMPD3Q01432 767 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 ATL2Q8NHH9 583 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 GMLQ99445 158 aa9.54□□□□□ -0.88
PDGFRA-206ENST00000508170 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
PDGFRA-206ENST00000508170 SCNN1AP37088 669 aa9.53□□□□□ -0.88
PDGFRA-206ENST00000508170 ENOX1Q8TC92 643 aaKnown RBP9.53□□□□□ -0.88
PDGFRA-206ENST00000508170 ACBD3Q9H3P7 528 aa9.53□□□□□ -0.88
PDGFRA-206ENST00000508170 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
PDGFRA-206ENST00000508170 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 USP5P45974 858 aa9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 EFCAB2Q5VUJ9 269 aa9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 DDX46Q7L014 1031 aaKnown RBP9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 GEMIN8Q9NWZ8 242 aaKnown RBP9.52□□□□□ -0.88
PDGFRA-206ENST00000508170 WASHC4Q2M389 1173 aa9.52□□□□□ -0.89
PDGFRA-206ENST00000508170 SLC39A13Q96H72 371 aa9.52□□□□□ -0.89
PDGFRA-206ENST00000508170 CTDP1Q9Y5B0 961 aaPredicted RBP9.52□□□□□ -0.89
PDGFRA-206ENST00000508170 POU5F1BQ06416 359 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 FGAP02671 866 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 SCP2P22307 547 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 MAN1A1P33908 653 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 AXDND1Q5T1B0 1012 aaPredicted RBP9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 IER2Q9BTL4 223 aa9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
PDGFRA-206ENST00000508170 NLRP6P59044 892 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 RASSF7Q02833 373 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 CCSAPQ6IQ19 270 aaPredicted RBP9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 PHOX2BQ99453 314 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 THRAP3Q9Y2W1 955 aaKnown RBP9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 GPR37L1O60883 481 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 TSR2Q969E8 191 aaKnown RBP9.5□□□□□ -0.89
PDGFRA-206ENST00000508170 VDRP11473 427 aa9.49□□□□□ -0.89
PDGFRA-206ENST00000508170 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
PDGFRA-206ENST00000508170 TTC30BQ8N4P2 665 aa9.49□□□□□ -0.89
PDGFRA-206ENST00000508170 MSL3Q8N5Y2 521 aaKnown RBP9.49□□□□□ -0.89
PDGFRA-206ENST00000508170 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
PDGFRA-206ENST00000508170 FAM163BP0C2L3 166 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 GNALP38405 381 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 ENPP3O14638 875 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 PRPF38AQ8NAV1 312 aaKnown RBP9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 ASB16Q96NS5 453 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
PDGFRA-206ENST00000508170 IFRD1O00458 451 aaPredicted RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 TIMM44O43615 452 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 RGS20O76081 388 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 MAPK1P28482 360 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 FANCCQ00597 558 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 EAPPQ56P03 285 aaPredicted RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 RAVER1Q8IY67 606 aaKnown RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
PDGFRA-206ENST00000508170 LDHCP07864 332 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 DRC7Q8IY82 874 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 MKL1Q969V6 931 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 CDC5LQ99459 802 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms