RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NOM1Q5C9Z4 860 aaKnown RBP9.88□□□□□ -0.83
CLCN3-206ENST00000507875 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
CLCN3-206ENST00000507875 DIEXFQ68CQ4 756 aaKnown RBP9.88□□□□□ -0.83
CLCN3-206ENST00000507875 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
CLCN3-206ENST00000507875 TRPM2O94759 1503 aa9.88□□□□□ -0.83
CLCN3-206ENST00000507875 RIMS1Q86UR5 1692 aaKnown RBP9.88□□□□□ -0.83
CLCN3-206ENST00000507875 ARHGAP31Q2M1Z3 1444 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
CLCN3-206ENST00000507875 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
CLCN3-206ENST00000507875 EN1Q05925 392 aaPredicted RBP9.87□□□□□ -0.83
CLCN3-206ENST00000507875 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 GJD4Q96KN9 370 aaPredicted RBP9.87□□□□□ -0.83
CLCN3-206ENST00000507875 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 KIF1BO60333 1816 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 PTPRTO14522 1441 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 ABCC3O15438 1527 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
CLCN3-206ENST00000507875 KIF3BO15066 747 aa9.86□□□□□ -0.83
CLCN3-206ENST00000507875 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
CLCN3-206ENST00000507875 TONSLQ96HA7 1378 aa9.86□□□□□ -0.83
CLCN3-206ENST00000507875 NDUFV2P19404 249 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 PXYLP1Q8TE99 480 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 POLR3GLQ9BT43 218 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 TRIM35Q9UPQ4 493 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 FER1L4A9Z1Z3 1794 aa9.85□□□□□ -0.83
CLCN3-206ENST00000507875 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 MOXD2PA6NHM9 499 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 USP17L8P0C7I0 530 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 SIGLEC1Q9BZZ2 1709 aa9.84□□□□□ -0.83
CLCN3-206ENST00000507875 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
CLCN3-206ENST00000507875 CNTLNQ9NXG0 1405 aa9.83□□□□□ -0.84
CLCN3-206ENST00000507875 CCDC144AA2RUR9 1427 aa9.83□□□□□ -0.84
CLCN3-206ENST00000507875 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
CLCN3-206ENST00000507875 PREX1Q8TCU6 1659 aa9.82□□□□□ -0.84
CLCN3-206ENST00000507875 FGD1P98174 961 aa9.82□□□□□ -0.84
CLCN3-206ENST00000507875 MRRFQ96E11 262 aaKnown RBP9.82□□□□□ -0.84
CLCN3-206ENST00000507875 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
CLCN3-206ENST00000507875 PIK3C2BO00750 1634 aa9.82□□□□□ -0.84
CLCN3-206ENST00000507875 LMTK3Q96Q04 1460 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 CLTCQ00610 1675 aaKnown RBP9.81□□□□□ -0.84
CLCN3-206ENST00000507875 CLTCL1P53675 1640 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
CLCN3-206ENST00000507875 SCNN1AP37088 669 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 EPS8L1Q8TE68 723 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 SIN3AQ96ST3 1273 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 PCDHGA10Q9Y5H3 936 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
CLCN3-206ENST00000507875 IFT172Q9UG01 1749 aa9.8□□□□□ -0.84
CLCN3-206ENST00000507875 TMEM121BQ9BXQ6 578 aaPredicted RBP9.8□□□□□ -0.84
CLCN3-206ENST00000507875 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
CLCN3-206ENST00000507875 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
CLCN3-206ENST00000507875 CEBPAP49715 358 aaPredicted RBP9.8□□□□□ -0.84
CLCN3-206ENST00000507875 KIAA1210Q9ULL0 1709 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
CLCN3-206ENST00000507875 NOS1P29475 1434 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 LAMC1P11047 1609 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
CLCN3-206ENST00000507875 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 GGT6Q6P531 493 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
CLCN3-206ENST00000507875 TRIM34Q9BYJ4 488 aa9.78□□□□□ -0.84
CLCN3-206ENST00000507875 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
CLCN3-206ENST00000507875 WASHC2CQ9Y4E1 1318 aa9.78□□□□□ -0.84
CLCN3-206ENST00000507875 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLCN3-206ENST00000507875 NPATQ14207 1427 aa9.78□□□□□ -0.84
CLCN3-206ENST00000507875 SPATA31D1Q6ZQQ2 1576 aa9.78□□□□□ -0.84
CLCN3-206ENST00000507875 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
CLCN3-206ENST00000507875 HSPA2P54652 639 aa9.77□□□□□ -0.85
CLCN3-206ENST00000507875 STK32AQ8WU08 396 aa9.77□□□□□ -0.85
CLCN3-206ENST00000507875 DNAJC14Q6Y2X3 702 aaPredicted RBP9.77□□□□□ -0.85
CLCN3-206ENST00000507875 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
CLCN3-206ENST00000507875 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
CLCN3-206ENST00000507875 LILRB3O75022 631 aa9.76□□□□□ -0.85
CLCN3-206ENST00000507875 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
CLCN3-206ENST00000507875 ADGRB3O60242 1522 aa9.76□□□□□ -0.85
CLCN3-206ENST00000507875 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
CLCN3-206ENST00000507875 PPLO60437 1756 aa9.76□□□□□ -0.85
CLCN3-206ENST00000507875 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
CLCN3-206ENST00000507875 SYNMO15061 1565 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 ALG2Q9H553 416 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 POLR1AO95602 1720 aaPredicted RBP9.75□□□□□ -0.85
CLCN3-206ENST00000507875 TRPM1Q7Z4N2 1603 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 MYOM2P54296 1465 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 SPTLC1O15269 473 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 TBC1D9Q6ZT07 1266 aa9.75□□□□□ -0.85
CLCN3-206ENST00000507875 C3P01024 1663 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 L3MBTL2Q969R5 705 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
CLCN3-206ENST00000507875 ERVK-7P63135 1459 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 HMGB1P09429 215 aaKnown RBP9.74□□□□□ -0.85
CLCN3-206ENST00000507875 HLA-CQ95604 372 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms