RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
GYPB-208ENST00000507009 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
GYPB-208ENST00000507009 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
GYPB-208ENST00000507009 NUP188Q5SRE5 1749 aa8.45□□□□□ -1.06
GYPB-208ENST00000507009 DISP2A7MBM2 1401 aa8.45□□□□□ -1.06
GYPB-208ENST00000507009 RREB1Q92766 1687 aa8.44□□□□□ -1.06
GYPB-208ENST00000507009 ARHGEF28Q8N1W1 1705 aaKnown RBP8.44□□□□□ -1.06
GYPB-208ENST00000507009 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
GYPB-208ENST00000507009 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
GYPB-208ENST00000507009 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
GYPB-208ENST00000507009 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
GYPB-208ENST00000507009 ACEP12821 1306 aa8.43□□□□□ -1.06
GYPB-208ENST00000507009 ATP7BP35670 1465 aa8.43□□□□□ -1.06
GYPB-208ENST00000507009 LHX8Q68G74 356 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 DCBLD2Q96PD2 775 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 SPON1Q9HCB6 807 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 RAB3GAP2Q9H2M9 1393 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 NRKQ7Z2Y5 1582 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 CAMTA1Q9Y6Y1 1673 aa8.42□□□□□ -1.06
GYPB-208ENST00000507009 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
GYPB-208ENST00000507009 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.06
GYPB-208ENST00000507009 KCNQ2O43526 872 aa8.4□□□□□ -1.06
GYPB-208ENST00000507009 SRPK2P78362 688 aaKnown RBP8.4□□□□□ -1.06
GYPB-208ENST00000507009 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
GYPB-208ENST00000507009 SOX12O15370 315 aa8.39□□□□□ -1.07
GYPB-208ENST00000507009 GALR2O43603 387 aaPredicted RBP8.39□□□□□ -1.07
GYPB-208ENST00000507009 GCP02774 474 aa8.39□□□□□ -1.07
GYPB-208ENST00000507009 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
GYPB-208ENST00000507009 BCL11BQ9C0K0 894 aaPredicted RBP8.39□□□□□ -1.07
GYPB-208ENST00000507009 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
GYPB-208ENST00000507009 PARP4Q9UKK3 1724 aaKnown RBP8.38□□□□□ -1.07
GYPB-208ENST00000507009 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
GYPB-208ENST00000507009 TOM1L2Q6ZVM7 507 aa8.38□□□□□ -1.07
GYPB-208ENST00000507009 NLRP13Q86W25 1043 aa8.38□□□□□ -1.07
GYPB-208ENST00000507009 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
GYPB-208ENST00000507009 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
GYPB-208ENST00000507009 CCDC61Q9Y6R9 512 aa8.38□□□□□ -1.07
GYPB-208ENST00000507009 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
GYPB-208ENST00000507009 OVOS2A0A0G2JMS6 1433 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 POLR3AO14802 1390 aaPredicted RBP8.37□□□□□ -1.07
GYPB-208ENST00000507009 LRRC37A3O60309 1634 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 NLRP6P59044 892 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 DDB1Q16531 1140 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
GYPB-208ENST00000507009 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
GYPB-208ENST00000507009 CRB1P82279 1406 aa8.37□□□□□ -1.07
GYPB-208ENST00000507009 NINLQ9Y2I6 1382 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 SBF2Q86WG5 1849 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 USP19O94966 1318 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 NBPF1Q3BBV0 1214 aa8.36□□□□□ -1.07
GYPB-208ENST00000507009 CPDO75976 1380 aa8.35□□□□□ -1.07
GYPB-208ENST00000507009 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
GYPB-208ENST00000507009 MYOM1P52179 1685 aa8.35□□□□□ -1.07
GYPB-208ENST00000507009 QRICH2Q9H0J4 1663 aa8.35□□□□□ -1.07
GYPB-208ENST00000507009 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
GYPB-208ENST00000507009 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
GYPB-208ENST00000507009 WNK3Q9BYP7 1800 aa8.34□□□□□ -1.07
GYPB-208ENST00000507009 STK32BQ9NY57 414 aa8.34□□□□□ -1.07
GYPB-208ENST00000507009 CABP1Q9NZU7 370 aa8.34□□□□□ -1.07
GYPB-208ENST00000507009 CASZ1Q86V15 1759 aa8.34□□□□□ -1.07
GYPB-208ENST00000507009 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
GYPB-208ENST00000507009 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
GYPB-208ENST00000507009 PLSCR1O15162 318 aa8.33□□□□□ -1.08
GYPB-208ENST00000507009 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
GYPB-208ENST00000507009 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
GYPB-208ENST00000507009 RGPD3A6NKT7 1758 aaPredicted RBP8.33□□□□□ -1.08
GYPB-208ENST00000507009 RGPD4Q7Z3J3 1758 aa8.33□□□□□ -1.08
GYPB-208ENST00000507009 KIAA1210Q9ULL0 1709 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 USP6P35125 1406 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 MIER1Q8N108 512 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 TSPYL2Q9H2G4 693 aaPredicted RBP8.32□□□□□ -1.08
GYPB-208ENST00000507009 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 PIK3C2AO00443 1686 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
GYPB-208ENST00000507009 WDR17Q8IZU2 1322 aa8.31□□□□□ -1.08
GYPB-208ENST00000507009 SLIT3O75094 1523 aa8.31□□□□□ -1.08
GYPB-208ENST00000507009 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
GYPB-208ENST00000507009 FKBP8Q14318 412 aa8.31□□□□□ -1.08
GYPB-208ENST00000507009 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
GYPB-208ENST00000507009 PELP1Q8IZL8 1130 aaKnown RBP8.31□□□□□ -1.08
GYPB-208ENST00000507009 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
GYPB-208ENST00000507009 FHDC1Q9C0D6 1143 aaPredicted RBP8.31□□□□□ -1.08
GYPB-208ENST00000507009 COL18A1P39060 1754 aa8.3□□□□□ -1.08
GYPB-208ENST00000507009 CPSF1Q10570 1443 aaKnown RBP8.3□□□□□ -1.08
GYPB-208ENST00000507009 EXOC5O00471 708 aa8.3□□□□□ -1.08
GYPB-208ENST00000507009 PTGER2P43116 358 aa8.3□□□□□ -1.08
GYPB-208ENST00000507009 SLC15A2Q16348 729 aa8.3□□□□□ -1.08
GYPB-208ENST00000507009 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
GYPB-208ENST00000507009 KAT6BQ8WYB5 2073 aa8.29□□□□□ -1.08
GYPB-208ENST00000507009 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
GYPB-208ENST00000507009 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms