RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
SSBP2-206ENST00000506960 FDX1P10109 184 aa8.8□□□□□ -1
SSBP2-206ENST00000506960 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
SSBP2-206ENST00000506960 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
SSBP2-206ENST00000506960 NEDD1Q8NHV4 660 aa8.8□□□□□ -1
SSBP2-206ENST00000506960 TRIM66O15016 1216 aa8.79□□□□□ -1
SSBP2-206ENST00000506960 SLC24A1O60721 1099 aa8.79□□□□□ -1
SSBP2-206ENST00000506960 PARP9Q8IXQ6 854 aa8.79□□□□□ -1
SSBP2-206ENST00000506960 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
SSBP2-206ENST00000506960 BPHLQ86WA6 291 aaPredicted RBP8.78□□□□□ -1
SSBP2-206ENST00000506960 FURINP09958 794 aa8.77□□□□□ -1.01
SSBP2-206ENST00000506960 AGERQ15109 404 aa8.77□□□□□ -1.01
SSBP2-206ENST00000506960 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
SSBP2-206ENST00000506960 AK7Q96M32 723 aa8.77□□□□□ -1.01
SSBP2-206ENST00000506960 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
SSBP2-206ENST00000506960 SPINT1O43278 529 aa8.76□□□□□ -1.01
SSBP2-206ENST00000506960 CTHP32929 405 aa8.76□□□□□ -1.01
SSBP2-206ENST00000506960 SPIRE2Q8WWL2 714 aa8.76□□□□□ -1.01
SSBP2-206ENST00000506960 KRTAP4-12Q9BQ66 201 aa8.76□□□□□ -1.01
SSBP2-206ENST00000506960 BCRP11274 1271 aa8.75□□□□□ -1.01
SSBP2-206ENST00000506960 FOXJ1Q92949 421 aa8.75□□□□□ -1.01
SSBP2-206ENST00000506960 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
SSBP2-206ENST00000506960 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
SSBP2-206ENST00000506960 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
SSBP2-206ENST00000506960 PRR7Q8TB68 274 aa8.73□□□□□ -1.01
SSBP2-206ENST00000506960 BEGAINQ9BUH8 593 aa8.73□□□□□ -1.01
SSBP2-206ENST00000506960 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
SSBP2-206ENST00000506960 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
SSBP2-206ENST00000506960 NDUFV2P19404 249 aa8.72□□□□□ -1.01
SSBP2-206ENST00000506960 FSHRP23945 695 aa8.72□□□□□ -1.01
SSBP2-206ENST00000506960 CCDC116Q8IYX3 515 aa8.72□□□□□ -1.01
SSBP2-206ENST00000506960 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
SSBP2-206ENST00000506960 FOXR1Q6PIV2 292 aa8.71□□□□□ -1.02
SSBP2-206ENST00000506960 GMCL1Q96IK5 515 aa8.71□□□□□ -1.02
SSBP2-206ENST00000506960 PDE4DQ08499 809 aa8.7□□□□□ -1.02
SSBP2-206ENST00000506960 Q6ZVU0 165 aa8.7□□□□□ -1.02
SSBP2-206ENST00000506960 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-206ENST00000506960 BCANQ96GW7 911 aa8.7□□□□□ -1.02
SSBP2-206ENST00000506960 GAS6Q14393 721 aa8.69□□□□□ -1.02
SSBP2-206ENST00000506960 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
SSBP2-206ENST00000506960 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
SSBP2-206ENST00000506960 KRBA1A5PL33 1030 aa8.68□□□□□ -1.02
SSBP2-206ENST00000506960 MTMR2Q13614 643 aa8.68□□□□□ -1.02
SSBP2-206ENST00000506960 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
SSBP2-206ENST00000506960 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
SSBP2-206ENST00000506960 IGF1RP08069 1367 aa8.66□□□□□ -1.02
SSBP2-206ENST00000506960 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
SSBP2-206ENST00000506960 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
SSBP2-206ENST00000506960 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
SSBP2-206ENST00000506960 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
SSBP2-206ENST00000506960 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
SSBP2-206ENST00000506960 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
SSBP2-206ENST00000506960 NSFL1CQ9UNZ2 370 aaKnown RBP8.65□□□□□ -1.02
SSBP2-206ENST00000506960 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
SSBP2-206ENST00000506960 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
SSBP2-206ENST00000506960 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
SSBP2-206ENST00000506960 GJA5P36382 358 aa8.63□□□□□ -1.03
SSBP2-206ENST00000506960 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
SSBP2-206ENST00000506960 CTSOP43234 321 aaPredicted RBP8.62□□□□□ -1.03
SSBP2-206ENST00000506960 DIXDC1Q155Q3 683 aa8.62□□□□□ -1.03
SSBP2-206ENST00000506960 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
SSBP2-206ENST00000506960 POLMQ9NP87 494 aaPredicted RBP8.62□□□□□ -1.03
SSBP2-206ENST00000506960 PIK3R2O00459 728 aa8.61□□□□□ -1.03
SSBP2-206ENST00000506960 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
SSBP2-206ENST00000506960 CBLBQ13191 982 aa8.61□□□□□ -1.03
SSBP2-206ENST00000506960 ACDQ96AP0 544 aa8.61□□□□□ -1.03
SSBP2-206ENST00000506960 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
SSBP2-206ENST00000506960 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
SSBP2-206ENST00000506960 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
SSBP2-206ENST00000506960 RNF217Q8TC41 542 aa8.6□□□□□ -1.03
SSBP2-206ENST00000506960 OIP5O43482 229 aa8.59□□□□□ -1.03
SSBP2-206ENST00000506960 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
SSBP2-206ENST00000506960 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-206ENST00000506960 MAP10Q9P2G4 905 aa8.59□□□□□ -1.03
SSBP2-206ENST00000506960 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
SSBP2-206ENST00000506960 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 HRCP23327 699 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 TRERF1Q96PN7 1200 aa8.58□□□□□ -1.04
SSBP2-206ENST00000506960 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
SSBP2-206ENST00000506960 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
SSBP2-206ENST00000506960 GOLGA2P5Q9HBQ8 144 aa8.57□□□□□ -1.04
SSBP2-206ENST00000506960 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
SSBP2-206ENST00000506960 SCO2A0A1W2PP80 73 aa8.56□□□□□ -1.04
SSBP2-206ENST00000506960 QPCTQ16769 361 aa8.56□□□□□ -1.04
SSBP2-206ENST00000506960 CDV3Q9UKY7 258 aaKnown RBP8.56□□□□□ -1.04
SSBP2-206ENST00000506960 H7C1W4 665 aa8.55□□□□□ -1.04
SSBP2-206ENST00000506960 RELBQ01201 579 aa8.55□□□□□ -1.04
SSBP2-206ENST00000506960 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
SSBP2-206ENST00000506960 ZNF837Q96EG3 531 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-206ENST00000506960 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
SSBP2-206ENST00000506960 LYSMD3Q7Z3D4 306 aa8.54□□□□□ -1.04
SSBP2-206ENST00000506960 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
SSBP2-206ENST00000506960 CUEDC1Q9NWM3 386 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-206ENST00000506960 MX2P20592 715 aa8.53□□□□□ -1.04
SSBP2-206ENST00000506960 COL8A1P27658 744 aa8.53□□□□□ -1.04
SSBP2-206ENST00000506960 MAP2K3P46734 347 aa8.53□□□□□ -1.04
SSBP2-206ENST00000506960 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms