RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 NFAT5O94916 1531 aa27.43■■□□□ 1.98
SNX25-204ENST00000506896 AXIN2Q9Y2T1 843 aa27.43■■□□□ 1.98
SNX25-204ENST00000506896 OVOS2A0A0J9YW53 1432 aa27.42■■□□□ 1.98
SNX25-204ENST00000506896 OVOS2Q6IE36 1432 aa27.42■■□□□ 1.98
SNX25-204ENST00000506896 BARGINQ6ZT62 677 aa27.42■■□□□ 1.98
SNX25-204ENST00000506896 A0A0G2JS52 829 aa27.41■■□□□ 1.98
SNX25-204ENST00000506896 ZBTB7CA1YPR0 619 aa27.41■■□□□ 1.98
SNX25-204ENST00000506896 MYT1Q01538 1121 aa27.41■■□□□ 1.98
SNX25-204ENST00000506896 CARD14Q9BXL6 1004 aa27.41■■□□□ 1.98
SNX25-204ENST00000506896 NSD3Q9BZ95 1437 aa27.41■■□□□ 1.98
SNX25-204ENST00000506896 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
SNX25-204ENST00000506896 COG3Q96JB2 828 aa27.4■■□□□ 1.98
SNX25-204ENST00000506896 USP35Q9P2H5 1018 aa27.39■■□□□ 1.98
SNX25-204ENST00000506896 FYB1O15117 783 aa27.38■■□□□ 1.97
SNX25-204ENST00000506896 SOX12O15370 315 aa27.38■■□□□ 1.97
SNX25-204ENST00000506896 TCP11L2Q8N4U5 519 aa27.38■■□□□ 1.97
SNX25-204ENST00000506896 THRAP3Q9Y2W1 955 aaKnown RBP27.38■■□□□ 1.97
SNX25-204ENST00000506896 PANK3Q9H999 370 aa27.37■■□□□ 1.97
SNX25-204ENST00000506896 CGNL1Q0VF96 1302 aa27.37■■□□□ 1.97
SNX25-204ENST00000506896 BLMP54132 1417 aaPredicted RBP27.36■■□□□ 1.97
SNX25-204ENST00000506896 CRB1P82279 1406 aa27.36■■□□□ 1.97
SNX25-204ENST00000506896 CCDC7Q96M83 1385 aa27.35■■□□□ 1.97
SNX25-204ENST00000506896 KIF20BQ96Q89 1820 aa27.35■■□□□ 1.97
SNX25-204ENST00000506896 ABCC6O95255 1503 aa27.33■■□□□ 1.97
SNX25-204ENST00000506896 GGNBP2Q9H3C7 697 aa27.33■■□□□ 1.97
SNX25-204ENST00000506896 WDR17Q8IZU2 1322 aa27.33■■□□□ 1.97
SNX25-204ENST00000506896 WASHC2AQ641Q2 1341 aa27.32■■□□□ 1.96
SNX25-204ENST00000506896 LTN1O94822 1766 aa27.31■■□□□ 1.96
SNX25-204ENST00000506896 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
SNX25-204ENST00000506896 TOM1L2Q6ZVM7 507 aa27.3■■□□□ 1.96
SNX25-204ENST00000506896 PARP4Q9UKK3 1724 aaKnown RBP27.28■■□□□ 1.96
SNX25-204ENST00000506896 NSD2O96028 1365 aa27.26■■□□□ 1.95
SNX25-204ENST00000506896 CARD10Q9BWT7 1032 aa27.26■■□□□ 1.95
SNX25-204ENST00000506896 KNSTRNQ9Y448 316 aa27.26■■□□□ 1.95
SNX25-204ENST00000506896 PDE3BQ13370 1112 aa27.24■■□□□ 1.95
SNX25-204ENST00000506896 SF3B2Q13435 895 aaKnown RBP27.24■■□□□ 1.95
SNX25-204ENST00000506896 FAM196AQ6ZSG2 479 aa27.24■■□□□ 1.95
SNX25-204ENST00000506896 DEFB132Q7Z7B7 95 aa27.24■■□□□ 1.95
SNX25-204ENST00000506896 CSB-PGBD3P0DP91 1061 aa27.22■■□□□ 1.95
SNX25-204ENST00000506896 ERBB3P21860 1342 aa27.21■■□□□ 1.95
SNX25-204ENST00000506896 WNK3Q9BYP7 1800 aa27.21■■□□□ 1.95
SNX25-204ENST00000506896 IP6K1Q92551 441 aa27.21■■□□□ 1.95
SNX25-204ENST00000506896 RGPD1P0DJD0 1748 aa27.21■■□□□ 1.95
SNX25-204ENST00000506896 MAP3K19Q56UN5 1328 aa27.2■■□□□ 1.95
SNX25-204ENST00000506896 FBLN1P23142 703 aa27.2■■□□□ 1.94
SNX25-204ENST00000506896 ANKRD26Q9UPS8 1709 aa27.2■■□□□ 1.94
SNX25-204ENST00000506896 CDCA7Q9BWT1 371 aaPredicted RBP27.19■■□□□ 1.94
SNX25-204ENST00000506896 RTL1A6NKG5 1358 aa27.19■■□□□ 1.94
SNX25-204ENST00000506896 DISP2A7MBM2 1401 aa27.18■■□□□ 1.94
SNX25-204ENST00000506896 KIF24Q5T7B8 1368 aa27.18■■□□□ 1.94
SNX25-204ENST00000506896 TNS1Q9HBL0 1735 aaKnown RBP27.17■■□□□ 1.94
SNX25-204ENST00000506896 AMPHP49418 695 aa27.17■■□□□ 1.94
SNX25-204ENST00000506896 ANKRD24Q8TF21 1146 aa27.17■■□□□ 1.94
SNX25-204ENST00000506896 LRRC37A3O60309 1634 aa27.16■■□□□ 1.94
SNX25-204ENST00000506896 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
SNX25-204ENST00000506896 BAG6P46379 1132 aa27.16■■□□□ 1.94
SNX25-204ENST00000506896 RRS1Q15050 365 aaKnown RBP27.16■■□□□ 1.94
SNX25-204ENST00000506896 DDB1Q16531 1140 aa27.16■■□□□ 1.94
SNX25-204ENST00000506896 AMER1Q5JTC6 1135 aaPredicted RBP27.15■■□□□ 1.94
SNX25-204ENST00000506896 PEAK1Q9H792 1746 aa27.14■■□□□ 1.94
SNX25-204ENST00000506896 TRIM37O94972 964 aa27.14■■□□□ 1.94
SNX25-204ENST00000506896 HOXC9P31274 260 aa27.14■■□□□ 1.94
SNX25-204ENST00000506896 NLRP2Q9NX02 1062 aa27.12■■□□□ 1.93
SNX25-204ENST00000506896 FLT4P35916 1363 aa27.11■■□□□ 1.93
SNX25-204ENST00000506896 EN1Q05925 392 aaPredicted RBP27.11■■□□□ 1.93
SNX25-204ENST00000506896 MORC1Q86VD1 984 aa27.11■■□□□ 1.93
SNX25-204ENST00000506896 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
SNX25-204ENST00000506896 MARCH10Q8NA82 808 aaPredicted RBP27.1■■□□□ 1.93
SNX25-204ENST00000506896 SBF2Q86WG5 1849 aa27.1■■□□□ 1.93
SNX25-204ENST00000506896 EXOC5O00471 708 aa27.09■■□□□ 1.93
SNX25-204ENST00000506896 OVOS2A0A0G2JMS6 1433 aa27.08■■□□□ 1.93
SNX25-204ENST00000506896 INSRP06213 1382 aa27.08■■□□□ 1.93
SNX25-204ENST00000506896 FAM208AQ9UK61 1670 aaKnown RBP27.08■■□□□ 1.92
SNX25-204ENST00000506896 TNNT2P45379 298 aaPredicted RBP27.07■■□□□ 1.92
SNX25-204ENST00000506896 EMILIN1Q9Y6C2 1016 aa27.07■■□□□ 1.92
SNX25-204ENST00000506896 BCL9O00512 1426 aa27.07■■□□□ 1.92
SNX25-204ENST00000506896 SMG6Q86US8 1419 aaKnown RBP27.07■■□□□ 1.92
SNX25-204ENST00000506896 CAMKK2Q96RR4 588 aa27.06■■□□□ 1.92
SNX25-204ENST00000506896 POLKQ9UBT6 870 aa27.06■■□□□ 1.92
SNX25-204ENST00000506896 MAP2P11137 1827 aaKnown RBP27.06■■□□□ 1.92
SNX25-204ENST00000506896 APBA3O96018 575 aa27.05■■□□□ 1.92
SNX25-204ENST00000506896 IL2RBP14784 551 aa27.05■■□□□ 1.92
SNX25-204ENST00000506896 LTV1Q96GA3 475 aaPredicted RBP27.05■■□□□ 1.92
SNX25-204ENST00000506896 EZH2Q15910 746 aaKnown RBP27.04■■□□□ 1.92
SNX25-204ENST00000506896 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
SNX25-204ENST00000506896 PPM1GO15355 546 aaPredicted RBP27.03■■□□□ 1.92
SNX25-204ENST00000506896 HSP90AB2PQ58FF8 381 aa27.03■■□□□ 1.92
SNX25-204ENST00000506896 CC2D1BQ5T0F9 858 aaKnown RBP27.03■■□□□ 1.92
SNX25-204ENST00000506896 TNS2Q63HR2 1409 aa27.02■■□□□ 1.92
SNX25-204ENST00000506896 PARD3Q8TEW0 1356 aa26.98■■□□□ 1.91
SNX25-204ENST00000506896 SRCAPQ6ZRS2 3230 aa26.98■■□□□ 1.91
SNX25-204ENST00000506896 BCL11BQ9C0K0 894 aaPredicted RBP26.98■■□□□ 1.91
SNX25-204ENST00000506896 NBPF6Q5VWK0 638 aa26.97■■□□□ 1.91
SNX25-204ENST00000506896 PTF1AQ7RTS3 328 aa26.97■■□□□ 1.91
SNX25-204ENST00000506896 NBPF4Q96M43 638 aa26.97■■□□□ 1.91
SNX25-204ENST00000506896 PLSCR1O15162 318 aa26.95■■□□□ 1.9
SNX25-204ENST00000506896 RREB1Q92766 1687 aa26.95■■□□□ 1.9
SNX25-204ENST00000506896 RGPD3A6NKT7 1758 aaPredicted RBP26.91■■□□□ 1.9
SNX25-204ENST00000506896 RGPD4Q7Z3J3 1758 aa26.91■■□□□ 1.9
SNX25-204ENST00000506896 KAT6BQ8WYB5 2073 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms