RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 RGPD3A6NKT7 1758 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-220ENST00000506831 RGPD4Q7Z3J3 1758 aa16.18■□□□□ 0.18
CCHCR1-220ENST00000506831 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
CCHCR1-220ENST00000506831 AXIN2Q9Y2T1 843 aa16.18■□□□□ 0.18
CCHCR1-220ENST00000506831 ZBTB7CA1YPR0 619 aa16.17■□□□□ 0.18
CCHCR1-220ENST00000506831 BCL11BQ9C0K0 894 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-220ENST00000506831 CPSF1Q10570 1443 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-220ENST00000506831 LRRC37A3O60309 1634 aa16.16■□□□□ 0.18
CCHCR1-220ENST00000506831 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-220ENST00000506831 AKAP12Q02952 1782 aa16.16■□□□□ 0.18
CCHCR1-220ENST00000506831 CARD10Q9BWT7 1032 aa16.16■□□□□ 0.18
CCHCR1-220ENST00000506831 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
CCHCR1-220ENST00000506831 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
CCHCR1-220ENST00000506831 KCNQ2O43526 872 aa16.14■□□□□ 0.17
CCHCR1-220ENST00000506831 WNK3Q9BYP7 1800 aa16.14■□□□□ 0.17
CCHCR1-220ENST00000506831 ABCC6O95255 1503 aa16.14■□□□□ 0.17
CCHCR1-220ENST00000506831 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
CCHCR1-220ENST00000506831 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-220ENST00000506831 KTN1Q86UP2 1357 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-220ENST00000506831 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
CCHCR1-220ENST00000506831 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
CCHCR1-220ENST00000506831 NFAT5O94916 1531 aa16.11■□□□□ 0.17
CCHCR1-220ENST00000506831 EXOC5O00471 708 aa16.11■□□□□ 0.17
CCHCR1-220ENST00000506831 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
CCHCR1-220ENST00000506831 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
CCHCR1-220ENST00000506831 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
CCHCR1-220ENST00000506831 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-220ENST00000506831 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
CCHCR1-220ENST00000506831 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
CCHCR1-220ENST00000506831 PROM2Q8N271 834 aa16.09■□□□□ 0.17
CCHCR1-220ENST00000506831 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
CCHCR1-220ENST00000506831 USP54Q70EL1 1684 aa16.08■□□□□ 0.16
CCHCR1-220ENST00000506831 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
CCHCR1-220ENST00000506831 SOX12O15370 315 aa16.07■□□□□ 0.16
CCHCR1-220ENST00000506831 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-220ENST00000506831 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
CCHCR1-220ENST00000506831 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-220ENST00000506831 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
CCHCR1-220ENST00000506831 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
CCHCR1-220ENST00000506831 ERBB3P21860 1342 aa16.05■□□□□ 0.16
CCHCR1-220ENST00000506831 CARD11Q9BXL7 1154 aa16.05■□□□□ 0.16
CCHCR1-220ENST00000506831 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
CCHCR1-220ENST00000506831 YY1P25490 414 aa16.04■□□□□ 0.16
CCHCR1-220ENST00000506831 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-220ENST00000506831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCHCR1-220ENST00000506831 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
CCHCR1-220ENST00000506831 STK32BQ9NY57 414 aa16.03■□□□□ 0.16
CCHCR1-220ENST00000506831 NME9Q86XW9 330 aa16.02■□□□□ 0.16
CCHCR1-220ENST00000506831 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-220ENST00000506831 IL2RBP14784 551 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 NLRP2Q9NX02 1062 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 NHSQ6T4R5 1651 aa16.01■□□□□ 0.15
CCHCR1-220ENST00000506831 LTN1O94822 1766 aa16■□□□□ 0.15
CCHCR1-220ENST00000506831 PTGER2P43116 358 aa16■□□□□ 0.15
CCHCR1-220ENST00000506831 PDGFDQ9GZP0 370 aaPredicted RBP16■□□□□ 0.15
CCHCR1-220ENST00000506831 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
CCHCR1-220ENST00000506831 ANKRD24Q8TF21 1146 aa15.99■□□□□ 0.15
CCHCR1-220ENST00000506831 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
CCHCR1-220ENST00000506831 ZBTB7AO95365 584 aa15.98■□□□□ 0.15
CCHCR1-220ENST00000506831 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
CCHCR1-220ENST00000506831 IP6K1Q92551 441 aa15.97■□□□□ 0.15
CCHCR1-220ENST00000506831 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
CCHCR1-220ENST00000506831 UTRNP46939 3433 aa15.96■□□□□ 0.15
CCHCR1-220ENST00000506831 ACSBG1Q96GR2 724 aa15.96■□□□□ 0.15
CCHCR1-220ENST00000506831 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
CCHCR1-220ENST00000506831 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
CCHCR1-220ENST00000506831 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
CCHCR1-220ENST00000506831 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
CCHCR1-220ENST00000506831 SYT17Q9BSW7 474 aa15.94■□□□□ 0.14
CCHCR1-220ENST00000506831 MYOM1P52179 1685 aa15.94■□□□□ 0.14
CCHCR1-220ENST00000506831 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-220ENST00000506831 BTAF1O14981 1849 aa15.94■□□□□ 0.14
CCHCR1-220ENST00000506831 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
CCHCR1-220ENST00000506831 TESK2Q96S53 571 aa15.93■□□□□ 0.14
CCHCR1-220ENST00000506831 SLC27A3Q5K4L6 730 aa15.92■□□□□ 0.14
CCHCR1-220ENST00000506831 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
CCHCR1-220ENST00000506831 COG3Q96JB2 828 aa15.91■□□□□ 0.14
CCHCR1-220ENST00000506831 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
CCHCR1-220ENST00000506831 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
CCHCR1-220ENST00000506831 ARXQ96QS3 562 aa15.9■□□□□ 0.14
CCHCR1-220ENST00000506831 LRRC4BQ9NT99 713 aa15.9■□□□□ 0.14
CCHCR1-220ENST00000506831 ST20-MTHFSA0A0A6YYL1 179 aa15.89■□□□□ 0.13
CCHCR1-220ENST00000506831 HOXC9P31274 260 aa15.89■□□□□ 0.13
CCHCR1-220ENST00000506831 MAP3K19Q56UN5 1328 aa15.89■□□□□ 0.13
CCHCR1-220ENST00000506831 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
CCHCR1-220ENST00000506831 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-220ENST00000506831 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
CCHCR1-220ENST00000506831 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
CCHCR1-220ENST00000506831 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
CCHCR1-220ENST00000506831 AMPHP49418 695 aa15.87■□□□□ 0.13
CCHCR1-220ENST00000506831 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-220ENST00000506831 CHD4Q14839 1912 aa15.86■□□□□ 0.13
CCHCR1-220ENST00000506831 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-220ENST00000506831 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms