RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 USP19O94966 1318 aa13.29□□□□□ -0.28
COPS4-204ENST00000506443 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
COPS4-204ENST00000506443 PROM2Q8N271 834 aa13.28□□□□□ -0.28
COPS4-204ENST00000506443 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
COPS4-204ENST00000506443 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
COPS4-204ENST00000506443 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
COPS4-204ENST00000506443 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
COPS4-204ENST00000506443 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
COPS4-204ENST00000506443 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
COPS4-204ENST00000506443 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
COPS4-204ENST00000506443 ACEP12821 1306 aa13.27□□□□□ -0.29
COPS4-204ENST00000506443 CPDO75976 1380 aa13.27□□□□□ -0.29
COPS4-204ENST00000506443 EVA1CP58658 441 aa13.26□□□□□ -0.29
COPS4-204ENST00000506443 SLIT3O75094 1523 aa13.25□□□□□ -0.29
COPS4-204ENST00000506443 CRB1P82279 1406 aa13.25□□□□□ -0.29
COPS4-204ENST00000506443 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
COPS4-204ENST00000506443 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
COPS4-204ENST00000506443 SHANK3Q9BYB0 1731 aa13.23□□□□□ -0.29
COPS4-204ENST00000506443 MARCH10Q8NA82 808 aaPredicted RBP13.23□□□□□ -0.29
COPS4-204ENST00000506443 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
COPS4-204ENST00000506443 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
COPS4-204ENST00000506443 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
COPS4-204ENST00000506443 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
COPS4-204ENST00000506443 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
COPS4-204ENST00000506443 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.29
COPS4-204ENST00000506443 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
COPS4-204ENST00000506443 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
COPS4-204ENST00000506443 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
COPS4-204ENST00000506443 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.3
COPS4-204ENST00000506443 GCP02774 474 aa13.2□□□□□ -0.3
COPS4-204ENST00000506443 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
COPS4-204ENST00000506443 BTAF1O14981 1849 aa13.2□□□□□ -0.3
COPS4-204ENST00000506443 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
COPS4-204ENST00000506443 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
COPS4-204ENST00000506443 PLSCR1O15162 318 aa13.18□□□□□ -0.3
COPS4-204ENST00000506443 DDB1Q16531 1140 aa13.18□□□□□ -0.3
COPS4-204ENST00000506443 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
COPS4-204ENST00000506443 USP6P35125 1406 aa13.17□□□□□ -0.3
COPS4-204ENST00000506443 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
COPS4-204ENST00000506443 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
COPS4-204ENST00000506443 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
COPS4-204ENST00000506443 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
COPS4-204ENST00000506443 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
COPS4-204ENST00000506443 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
COPS4-204ENST00000506443 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 SOX12O15370 315 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 NFAT5O94916 1531 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
COPS4-204ENST00000506443 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
COPS4-204ENST00000506443 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
COPS4-204ENST00000506443 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
COPS4-204ENST00000506443 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
COPS4-204ENST00000506443 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
COPS4-204ENST00000506443 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
COPS4-204ENST00000506443 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
COPS4-204ENST00000506443 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
COPS4-204ENST00000506443 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 BCL9O00512 1426 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 ABCC6O95255 1503 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 POLA2Q14181 598 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
COPS4-204ENST00000506443 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
COPS4-204ENST00000506443 NLRP6P59044 892 aa13.11□□□□□ -0.31
COPS4-204ENST00000506443 SRPK2P78362 688 aaKnown RBP13.11□□□□□ -0.31
COPS4-204ENST00000506443 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
COPS4-204ENST00000506443 ARXQ96QS3 562 aa13.11□□□□□ -0.31
COPS4-204ENST00000506443 LTN1O94822 1766 aa13.11□□□□□ -0.31
COPS4-204ENST00000506443 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
COPS4-204ENST00000506443 KCNQ4P56696 695 aa13.1□□□□□ -0.31
COPS4-204ENST00000506443 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
COPS4-204ENST00000506443 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
COPS4-204ENST00000506443 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
COPS4-204ENST00000506443 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
COPS4-204ENST00000506443 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
COPS4-204ENST00000506443 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
COPS4-204ENST00000506443 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
COPS4-204ENST00000506443 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
COPS4-204ENST00000506443 GPR162Q16538 588 aa13.07□□□□□ -0.32
COPS4-204ENST00000506443 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
COPS4-204ENST00000506443 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPS4-204ENST00000506443 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
COPS4-204ENST00000506443 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
COPS4-204ENST00000506443 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
COPS4-204ENST00000506443 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
COPS4-204ENST00000506443 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
COPS4-204ENST00000506443 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
COPS4-204ENST00000506443 C11orf95C9JLR9 678 aaPredicted RBP13.04□□□□□ -0.32
COPS4-204ENST00000506443 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
COPS4-204ENST00000506443 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
COPS4-204ENST00000506443 LY75O60449 1722 aa13.04□□□□□ -0.32
COPS4-204ENST00000506443 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
COPS4-204ENST00000506443 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
COPS4-204ENST00000506443 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
COPS4-204ENST00000506443 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
COPS4-204ENST00000506443 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms