RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 THAP11Q96EK4 314 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 SLC6A16Q9GZN6 736 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 C11orf95C9JLR9 678 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-205ENST00000506426 NFX1Q12986 1120 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-205ENST00000506426 NFATC2IPQ8NCF5 419 aa5.55□□□□□ -1.52
TRAPPC11-205ENST00000506426 MCCD1P59942 119 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 PTK2Q05397 1052 aa5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 MSS51Q4VC12 460 aa5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 GPKOWQ92917 476 aaPredicted RBP eCLIP5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 EVA1BQ9NVM1 165 aa5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 MAP10Q9P2G4 905 aa5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 GPSM3Q9Y4H4 160 aa5.54□□□□□ -1.52
TRAPPC11-205ENST00000506426 CARNS1A5YM72 827 aa5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 CCNYL3P0C7X3 344 aa5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 SKIP12755 728 aa5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 MFAP1P55081 439 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 PDXDC2PQ6P474 469 aa5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 TOR4AQ9NXH8 423 aa5.53□□□□□ -1.52
TRAPPC11-205ENST00000506426 TMEM88BA6NKF7 163 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 AXIN1O15169 862 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 SNRPBP14678 240 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 KCNH2Q12809 1159 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 ELOAQ14241 798 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 B4GALNT3Q6L9W6 998 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 SPSB2Q99619 263 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 NUDT12Q9BQG2 462 aa5.52□□□□□ -1.53
TRAPPC11-205ENST00000506426 USP17L3A6NCW0 530 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 USP17L4A6NCW7 530 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 LZTS3O60299 673 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 DXOO77932 396 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 MMP16P51512 607 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 SLFNL1Q499Z3 407 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 NBPF14Q5TI25 921 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 USP17L2Q6R6M4 530 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 USP17L1Q7RTZ2 530 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 PLEKHM2Q8IWE5 1019 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 CRIPAKQ8N1N5 446 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 FAM160A2Q8N612 972 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 PRDM9Q9NQV7 894 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 CEP126Q9P2H0 1117 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 FCF1Q9Y324 198 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 NISCHQ9Y2I1 1504 aa5.51□□□□□ -1.53
TRAPPC11-205ENST00000506426 USP17L5A8MUK1 530 aa5.5□□□□□ -1.53
TRAPPC11-205ENST00000506426 AVPP01185 164 aa5.5□□□□□ -1.53
TRAPPC11-205ENST00000506426 MKRN1Q9UHC7 482 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-205ENST00000506426 MTMR7Q9Y216 660 aa5.5□□□□□ -1.53
TRAPPC11-205ENST00000506426 PCDHB9Q9Y5E1 797 aa5.5□□□□□ -1.53
TRAPPC11-205ENST00000506426 ATP5J2-PTCD1G3V325 749 aa5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 LARP1Q6PKG0 1096 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 RNF135Q8IUD6 432 aa5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 CYP4X1Q8N118 509 aa5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 ARHGAP9Q9BRR9 750 aa5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 NOVA2Q9UNW9 492 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 IVNS1ABPQ9Y6Y0 642 aa5.49□□□□□ -1.53
TRAPPC11-205ENST00000506426 FAM196BA6NMK8 535 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 MAP7D1Q3KQU3 841 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 TMEM164Q5U3C3 297 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 ZBTB33Q86T24 672 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 DEPDC4Q8N2C3 294 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 PHTF2Q8N3S3 785 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 FAM174AQ8TBP5 190 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 STK17AQ9UEE5 414 aa5.48□□□□□ -1.53
TRAPPC11-205ENST00000506426 WIPF1O43516 503 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 RASA1P20936 1047 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 NCOA4Q13772 614 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 CCDC24Q8N4L8 307 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 PLPP7Q8NBV4 271 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 ADAM32Q8TC27 787 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 STK32AQ8WU08 396 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 OCSTAMPQ9BR26 566 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 GNEQ9Y223 722 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-205ENST00000506426 TTC24A2A3L6 582 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L15C9J2P7 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L10C9JJH3 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L13C9JLJ4 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L12C9JPN9 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L11C9JVI0 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L21D6R901 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L18D6R9N7 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L22D6RA61 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L17D6RBQ6 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L19D6RCP7 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L20D6RJB6 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 J3QL48 77 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 CD2BP2O95400 341 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 SMPD1P17405 629 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 USP17L24Q0WX57 530 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 CCDC27Q2M243 656 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 EML3Q32P44 896 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 CRTC2Q53ET0 693 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 SND1Q7KZF4 910 aaKnown RBP eCLIP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 DZIP3Q86Y13 1208 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 CCER1Q8TC90 406 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 FAM200AQ8TCP9 573 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 CDCA7Q9BWT1 371 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 UNC93B1Q9H1C4 597 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms