RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
CDH6-203ENST00000506396 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
CDH6-203ENST00000506396 PLCD3Q8N3E9 789 aa22.24■■□□□ 1.15
CDH6-203ENST00000506396 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
CDH6-203ENST00000506396 ZNF830Q96NB3 372 aaPredicted RBP22.24■■□□□ 1.15
CDH6-203ENST00000506396 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
CDH6-203ENST00000506396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDH6-203ENST00000506396 NEURL4Q96JN8 1562 aa22.23■■□□□ 1.15
CDH6-203ENST00000506396 HMGN5P82970 282 aaKnown RBP22.23■■□□□ 1.15
CDH6-203ENST00000506396 TAF3Q5VWG9 929 aa22.22■■□□□ 1.15
CDH6-203ENST00000506396 PLEKHF1Q96S99 279 aa22.22■■□□□ 1.15
CDH6-203ENST00000506396 USP32Q8NFA0 1604 aa22.22■■□□□ 1.15
CDH6-203ENST00000506396 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 KIF1BO60333 1816 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 SYCE3A1L190 88 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 PRPF40AO75400 957 aaKnown RBP22.21■■□□□ 1.15
CDH6-203ENST00000506396 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 KIF3AQ9Y496 699 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 C1orf115Q9H7X2 142 aa22.21■■□□□ 1.15
CDH6-203ENST00000506396 CDK11BP21127 795 aaKnown RBP22.2■■□□□ 1.14
CDH6-203ENST00000506396 LRSAM1Q6UWE0 723 aa22.2■■□□□ 1.14
CDH6-203ENST00000506396 MPNDQ8N594 471 aa22.2■■□□□ 1.14
CDH6-203ENST00000506396 GTF2F1P35269 517 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDH6-203ENST00000506396 GPT2Q8TD30 523 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 AK9Q5TCS8 1911 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 NRXN1Q9ULB1 1477 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 ZNF771Q7L3S4 317 aaPredicted RBP22.19■■□□□ 1.14
CDH6-203ENST00000506396 PDCL2Q8N4E4 241 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
CDH6-203ENST00000506396 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
CDH6-203ENST00000506396 VWDEQ8N2E2 1590 aa22.18■■□□□ 1.14
CDH6-203ENST00000506396 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
CDH6-203ENST00000506396 BCL2L12Q9HB09 334 aa22.17■■□□□ 1.14
CDH6-203ENST00000506396 IL16Q14005 1332 aa22.17■■□□□ 1.14
CDH6-203ENST00000506396 NSD2O96028 1365 aa22.17■■□□□ 1.14
CDH6-203ENST00000506396 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
CDH6-203ENST00000506396 ARHGAP31Q2M1Z3 1444 aa22.17■■□□□ 1.14
CDH6-203ENST00000506396 NUCB2P80303 420 aa22.16■■□□□ 1.14
CDH6-203ENST00000506396 PKP1Q13835 747 aa22.16■■□□□ 1.14
CDH6-203ENST00000506396 TMEM63CQ9P1W3 806 aa22.16■■□□□ 1.14
CDH6-203ENST00000506396 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
CDH6-203ENST00000506396 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
CDH6-203ENST00000506396 U2AF2P26368 475 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDH6-203ENST00000506396 CDC45O75419 566 aa22.15■■□□□ 1.14
CDH6-203ENST00000506396 NOLC1Q14978 699 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDH6-203ENST00000506396 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
CDH6-203ENST00000506396 INO80Q9ULG1 1556 aaPredicted RBP22.15■■□□□ 1.14
CDH6-203ENST00000506396 C17orf53Q8N3J3 647 aaPredicted RBP22.14■■□□□ 1.13
CDH6-203ENST00000506396 ZBTB7BO15156 539 aaPredicted RBP22.13■■□□□ 1.13
CDH6-203ENST00000506396 C14orf93Q9H972 538 aaKnown RBP22.13■■□□□ 1.13
CDH6-203ENST00000506396 PIBF1Q8WXW3 757 aa22.13■■□□□ 1.13
CDH6-203ENST00000506396 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
CDH6-203ENST00000506396 EVC2Q86UK5 1308 aa22.11■■□□□ 1.13
CDH6-203ENST00000506396 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
CDH6-203ENST00000506396 MED14O60244 1454 aa22.11■■□□□ 1.13
CDH6-203ENST00000506396 RABEP1Q15276 862 aa22.11■■□□□ 1.13
CDH6-203ENST00000506396 MAPK8IP2Q13387 824 aaPredicted RBP22.1■■□□□ 1.13
CDH6-203ENST00000506396 NSFL1CQ9UNZ2 370 aaKnown RBP22.1■■□□□ 1.13
CDH6-203ENST00000506396 ATP7AQ04656 1500 aa22.1■■□□□ 1.13
CDH6-203ENST00000506396 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
CDH6-203ENST00000506396 CHAMP1Q96JM3 812 aa22.1■■□□□ 1.13
CDH6-203ENST00000506396 SIRT2Q8IXJ6 389 aa22.09■■□□□ 1.13
CDH6-203ENST00000506396 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
CDH6-203ENST00000506396 ADGRB1O14514 1584 aa22.09■■□□□ 1.13
CDH6-203ENST00000506396 ERCC6L2Q5T890 1561 aa22.09■■□□□ 1.13
CDH6-203ENST00000506396 PAXIP1Q6ZW49 1069 aaPredicted RBP22.08■■□□□ 1.12
CDH6-203ENST00000506396 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.12
CDH6-203ENST00000506396 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
CDH6-203ENST00000506396 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
CDH6-203ENST00000506396 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
CDH6-203ENST00000506396 TTC12Q9H892 705 aaPredicted RBP22.07■■□□□ 1.12
CDH6-203ENST00000506396 ADGRB3O60242 1522 aa22.06■■□□□ 1.12
CDH6-203ENST00000506396 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
CDH6-203ENST00000506396 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
CDH6-203ENST00000506396 PPRC1Q5VV67 1664 aaKnown RBP22.05■■□□□ 1.12
CDH6-203ENST00000506396 KCNJ4P48050 445 aa22.05■■□□□ 1.12
CDH6-203ENST00000506396 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
CDH6-203ENST00000506396 TSPY26PQ9H489 355 aa22.05■■□□□ 1.12
CDH6-203ENST00000506396 IRX5P78411 483 aaPredicted RBP22.05■■□□□ 1.12
CDH6-203ENST00000506396 A0A1W2PP64 1363 aa22.05■■□□□ 1.12
CDH6-203ENST00000506396 FKBP5Q13451 457 aaPredicted RBP22.04■■□□□ 1.12
CDH6-203ENST00000506396 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
CDH6-203ENST00000506396 ZGPATQ8N5A5 531 aaKnown RBP22.04■■□□□ 1.12
CDH6-203ENST00000506396 BRPF1P55201 1214 aaPredicted RBP22.03■■□□□ 1.12
CDH6-203ENST00000506396 FOXD4L5Q5VV16 416 aaPredicted RBP22.03■■□□□ 1.12
CDH6-203ENST00000506396 MRPL50Q8N5N7 158 aaKnown RBP22.03■■□□□ 1.12
CDH6-203ENST00000506396 FOXD4L4Q8WXT5 416 aaPredicted RBP22.03■■□□□ 1.12
CDH6-203ENST00000506396 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
CDH6-203ENST00000506396 PLEKHM2Q8IWE5 1019 aa22.02■■□□□ 1.12
CDH6-203ENST00000506396 ELL2O00472 640 aaPredicted RBP22.02■■□□□ 1.12
CDH6-203ENST00000506396 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
CDH6-203ENST00000506396 PUS7Q96PZ0 661 aaKnown RBP22.02■■□□□ 1.12
CDH6-203ENST00000506396 USP26Q9BXU7 913 aa22.02■■□□□ 1.12
CDH6-203ENST00000506396 RIOK3O14730 519 aaKnown RBP22.01■■□□□ 1.11
CDH6-203ENST00000506396 ANKRD7Q92527 254 aa22.01■■□□□ 1.11
CDH6-203ENST00000506396 FEZ1Q99689 392 aa22.01■■□□□ 1.11
CDH6-203ENST00000506396 CWC22Q9HCG8 908 aaKnown RBP22.01■■□□□ 1.11
CDH6-203ENST00000506396 TSPYL6Q8N831 410 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms