RNA–Protein interactions for RNA: ENST00000506222.6

LINC01016-201, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2 BASIC

Gene LINC01016, Length 3,151 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-201ENST00000506222 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
LINC01016-201ENST00000506222 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
LINC01016-201ENST00000506222 A0A0G2JS52 829 aa15.43■□□□□ 0.06
LINC01016-201ENST00000506222 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
LINC01016-201ENST00000506222 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
LINC01016-201ENST00000506222 TTC21AQ8NDW8 1320 aa15.42■□□□□ 0.06
LINC01016-201ENST00000506222 FCHSD2O94868 740 aa15.42■□□□□ 0.06
LINC01016-201ENST00000506222 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
LINC01016-201ENST00000506222 CDC42BPGQ6DT37 1551 aa15.4■□□□□ 0.06
LINC01016-201ENST00000506222 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
LINC01016-201ENST00000506222 ANKRD24Q8TF21 1146 aa15.39■□□□□ 0.05
LINC01016-201ENST00000506222 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
LINC01016-201ENST00000506222 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
LINC01016-201ENST00000506222 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
LINC01016-201ENST00000506222 NPHP3Q7Z494 1330 aa15.38■□□□□ 0.05
LINC01016-201ENST00000506222 UBAP1LF5GYI3 381 aa15.38■□□□□ 0.05
LINC01016-201ENST00000506222 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
LINC01016-201ENST00000506222 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
LINC01016-201ENST00000506222 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
LINC01016-201ENST00000506222 CHD2O14647 1828 aaKnown RBP15.37■□□□□ 0.05
LINC01016-201ENST00000506222 E9PSI1 815 aa15.37■□□□□ 0.05
LINC01016-201ENST00000506222 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
LINC01016-201ENST00000506222 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
LINC01016-201ENST00000506222 NFE2L2Q16236 605 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 ZNF521Q96K83 1311 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
LINC01016-201ENST00000506222 MST1RQ04912 1400 aa15.36■□□□□ 0.05
LINC01016-201ENST00000506222 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
LINC01016-201ENST00000506222 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
LINC01016-201ENST00000506222 PDE3BQ13370 1112 aa15.35■□□□□ 0.05
LINC01016-201ENST00000506222 LGR6Q9HBX8 967 aa15.35■□□□□ 0.05
LINC01016-201ENST00000506222 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
LINC01016-201ENST00000506222 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
LINC01016-201ENST00000506222 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
LINC01016-201ENST00000506222 IP6K1Q92551 441 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 FLT4P35916 1363 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 KIAA0232Q92628 1395 aa15.34■□□□□ 0.05
LINC01016-201ENST00000506222 EVA1CP58658 441 aa15.33■□□□□ 0.04
LINC01016-201ENST00000506222 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
LINC01016-201ENST00000506222 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.04
LINC01016-201ENST00000506222 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
LINC01016-201ENST00000506222 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
LINC01016-201ENST00000506222 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
LINC01016-201ENST00000506222 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
LINC01016-201ENST00000506222 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
LINC01016-201ENST00000506222 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
LINC01016-201ENST00000506222 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
LINC01016-201ENST00000506222 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
LINC01016-201ENST00000506222 SRCAPQ6ZRS2 3230 aa15.31■□□□□ 0.04
LINC01016-201ENST00000506222 AATKQ6ZMQ8 1374 aa15.31■□□□□ 0.04
LINC01016-201ENST00000506222 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
LINC01016-201ENST00000506222 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
LINC01016-201ENST00000506222 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
LINC01016-201ENST00000506222 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
LINC01016-201ENST00000506222 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
LINC01016-201ENST00000506222 USP31Q70CQ4 1352 aa15.29■□□□□ 0.04
LINC01016-201ENST00000506222 KCNQ3O43525 872 aa15.29■□□□□ 0.04
LINC01016-201ENST00000506222 SSH1Q8WYL5 1049 aa15.29■□□□□ 0.04
LINC01016-201ENST00000506222 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
LINC01016-201ENST00000506222 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
LINC01016-201ENST00000506222 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
LINC01016-201ENST00000506222 EIF2S2P20042 333 aaKnown RBP15.29■□□□□ 0.04
LINC01016-201ENST00000506222 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
LINC01016-201ENST00000506222 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
LINC01016-201ENST00000506222 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
LINC01016-201ENST00000506222 ANXA1P04083 346 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 RLBP1P12271 317 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 MYT1Q01538 1121 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 IL17REQ8NFR9 667 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 RARSP54136 660 aaKnown RBP15.28■□□□□ 0.04
LINC01016-201ENST00000506222 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
LINC01016-201ENST00000506222 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
LINC01016-201ENST00000506222 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.03
LINC01016-201ENST00000506222 WDR63Q8IWG1 891 aa15.27■□□□□ 0.03
LINC01016-201ENST00000506222 RAPGEF4Q8WZA2 1011 aa15.26■□□□□ 0.03
LINC01016-201ENST00000506222 ADGRB2O60241 1585 aa15.26■□□□□ 0.03
LINC01016-201ENST00000506222 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
LINC01016-201ENST00000506222 NGEFQ8N5V2 710 aa15.25■□□□□ 0.03
LINC01016-201ENST00000506222 ITSN1Q15811 1721 aa15.25■□□□□ 0.03
LINC01016-201ENST00000506222 IGSF1Q8N6C5 1336 aa15.24■□□□□ 0.03
LINC01016-201ENST00000506222 TRMT2AQ8IZ69 625 aaKnown RBP15.24■□□□□ 0.03
LINC01016-201ENST00000506222 INSRP06213 1382 aa15.24■□□□□ 0.03
LINC01016-201ENST00000506222 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
LINC01016-201ENST00000506222 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
LINC01016-201ENST00000506222 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
LINC01016-201ENST00000506222 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
LINC01016-201ENST00000506222 PIK3C2AO00443 1686 aa15.23■□□□□ 0.03
LINC01016-201ENST00000506222 ERBB3P21860 1342 aa15.23■□□□□ 0.03
LINC01016-201ENST00000506222 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
LINC01016-201ENST00000506222 GNAT3A8MTJ3 354 aa15.23■□□□□ 0.03
LINC01016-201ENST00000506222 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
LINC01016-201ENST00000506222 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms