RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 EVA1CP58658 441 aa23.68■■□□□ 1.38
PDLIM7-215ENST00000506161 R3HDM1Q15032 1099 aaKnown RBP23.68■■□□□ 1.38
PDLIM7-215ENST00000506161 MYOM1P52179 1685 aa23.67■■□□□ 1.38
PDLIM7-215ENST00000506161 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
PDLIM7-215ENST00000506161 USP31Q70CQ4 1352 aa23.66■■□□□ 1.38
PDLIM7-215ENST00000506161 BARGINQ6ZT62 677 aa23.65■■□□□ 1.38
PDLIM7-215ENST00000506161 CRB1P82279 1406 aa23.65■■□□□ 1.38
PDLIM7-215ENST00000506161 PEAK1Q9H792 1746 aa23.64■■□□□ 1.38
PDLIM7-215ENST00000506161 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
PDLIM7-215ENST00000506161 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
PDLIM7-215ENST00000506161 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
PDLIM7-215ENST00000506161 TCP11L2Q8N4U5 519 aa23.63■■□□□ 1.37
PDLIM7-215ENST00000506161 SBF2Q86WG5 1849 aa23.63■■□□□ 1.37
PDLIM7-215ENST00000506161 PUS7Q96PZ0 661 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-215ENST00000506161 DISP2A7MBM2 1401 aa23.61■■□□□ 1.37
PDLIM7-215ENST00000506161 YY1P25490 414 aa23.6■■□□□ 1.37
PDLIM7-215ENST00000506161 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
PDLIM7-215ENST00000506161 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
PDLIM7-215ENST00000506161 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.37
PDLIM7-215ENST00000506161 ABCC6O95255 1503 aa23.58■■□□□ 1.36
PDLIM7-215ENST00000506161 WDR17Q8IZU2 1322 aa23.58■■□□□ 1.36
PDLIM7-215ENST00000506161 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
PDLIM7-215ENST00000506161 EZH2Q15910 746 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-215ENST00000506161 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
PDLIM7-215ENST00000506161 FBLN1P23142 703 aa23.56■■□□□ 1.36
PDLIM7-215ENST00000506161 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
PDLIM7-215ENST00000506161 TERF2IPQ9NYB0 399 aa23.55■■□□□ 1.36
PDLIM7-215ENST00000506161 THRAP3Q9Y2W1 955 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-215ENST00000506161 RREB1Q92766 1687 aa23.54■■□□□ 1.36
PDLIM7-215ENST00000506161 TRIM37O94972 964 aa23.54■■□□□ 1.36
PDLIM7-215ENST00000506161 ANKRD36BQ8N2N9 1353 aa23.53■■□□□ 1.36
PDLIM7-215ENST00000506161 NINLQ9Y2I6 1382 aa23.53■■□□□ 1.36
PDLIM7-215ENST00000506161 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.36
PDLIM7-215ENST00000506161 NUP188Q5SRE5 1749 aa23.51■■□□□ 1.35
PDLIM7-215ENST00000506161 CAMKK2Q96RR4 588 aa23.51■■□□□ 1.35
PDLIM7-215ENST00000506161 TMF1P82094 1093 aa23.5■■□□□ 1.35
PDLIM7-215ENST00000506161 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
PDLIM7-215ENST00000506161 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
PDLIM7-215ENST00000506161 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
PDLIM7-215ENST00000506161 PTF1AQ7RTS3 328 aa23.48■■□□□ 1.35
PDLIM7-215ENST00000506161 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
PDLIM7-215ENST00000506161 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
PDLIM7-215ENST00000506161 ERBB3P21860 1342 aa23.48■■□□□ 1.35
PDLIM7-215ENST00000506161 FAM208AQ9UK61 1670 aaKnown RBP23.47■■□□□ 1.35
PDLIM7-215ENST00000506161 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
PDLIM7-215ENST00000506161 MARCH10Q8NA82 808 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-215ENST00000506161 APBA3O96018 575 aa23.45■■□□□ 1.34
PDLIM7-215ENST00000506161 CARD14Q9BXL6 1004 aa23.45■■□□□ 1.34
PDLIM7-215ENST00000506161 FYB1O15117 783 aa23.44■■□□□ 1.34
PDLIM7-215ENST00000506161 DDB1Q16531 1140 aa23.44■■□□□ 1.34
PDLIM7-215ENST00000506161 GGNBP2Q9H3C7 697 aa23.44■■□□□ 1.34
PDLIM7-215ENST00000506161 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
PDLIM7-215ENST00000506161 MAP3K19Q56UN5 1328 aa23.43■■□□□ 1.34
PDLIM7-215ENST00000506161 SHANK3Q9BYB0 1731 aa23.43■■□□□ 1.34
PDLIM7-215ENST00000506161 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
PDLIM7-215ENST00000506161 DCAF8L1A6NGE4 600 aa23.42■■□□□ 1.34
PDLIM7-215ENST00000506161 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
PDLIM7-215ENST00000506161 SLC24A1O60721 1099 aa23.41■■□□□ 1.34
PDLIM7-215ENST00000506161 NBPF14Q5TI25 921 aa23.41■■□□□ 1.34
PDLIM7-215ENST00000506161 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
PDLIM7-215ENST00000506161 RGPD3A6NKT7 1758 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-215ENST00000506161 RGPD4Q7Z3J3 1758 aa23.4■■□□□ 1.34
PDLIM7-215ENST00000506161 COG3Q96JB2 828 aa23.4■■□□□ 1.34
PDLIM7-215ENST00000506161 PPP1R1BQ9UD71 204 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-215ENST00000506161 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-215ENST00000506161 RRS1Q15050 365 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-215ENST00000506161 IP6K1Q92551 441 aa23.39■■□□□ 1.33
PDLIM7-215ENST00000506161 NLRP2Q9NX02 1062 aa23.39■■□□□ 1.33
PDLIM7-215ENST00000506161 NSD3Q9BZ95 1437 aa23.39■■□□□ 1.33
PDLIM7-215ENST00000506161 NHSQ6T4R5 1651 aa23.38■■□□□ 1.33
PDLIM7-215ENST00000506161 HOXC9P31274 260 aa23.37■■□□□ 1.33
PDLIM7-215ENST00000506161 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
PDLIM7-215ENST00000506161 SPON1Q9HCB6 807 aa23.37■■□□□ 1.33
PDLIM7-215ENST00000506161 MAP2P11137 1827 aaKnown RBP23.36■■□□□ 1.33
PDLIM7-215ENST00000506161 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
PDLIM7-215ENST00000506161 BCL9O00512 1426 aa23.34■■□□□ 1.33
PDLIM7-215ENST00000506161 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
PDLIM7-215ENST00000506161 CDCA7Q9BWT1 371 aaPredicted RBP23.34■■□□□ 1.33
PDLIM7-215ENST00000506161 BTAF1O14981 1849 aa23.33■■□□□ 1.33
PDLIM7-215ENST00000506161 KCNQ2O43526 872 aa23.33■■□□□ 1.33
PDLIM7-215ENST00000506161 CDCA8Q53HL2 280 aa23.33■■□□□ 1.33
PDLIM7-215ENST00000506161 EXOC5O00471 708 aa23.32■■□□□ 1.32
PDLIM7-215ENST00000506161 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
PDLIM7-215ENST00000506161 IL2RBP14784 551 aa23.31■■□□□ 1.32
PDLIM7-215ENST00000506161 MEGF6O75095 1541 aa23.31■■□□□ 1.32
PDLIM7-215ENST00000506161 AMPHP49418 695 aa23.3■■□□□ 1.32
PDLIM7-215ENST00000506161 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
PDLIM7-215ENST00000506161 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
PDLIM7-215ENST00000506161 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
PDLIM7-215ENST00000506161 RTL1A6NKG5 1358 aa23.28■■□□□ 1.32
PDLIM7-215ENST00000506161 PROM2Q8N271 834 aa23.28■■□□□ 1.32
PDLIM7-215ENST00000506161 BCL11BQ9C0K0 894 aaPredicted RBP23.28■■□□□ 1.32
PDLIM7-215ENST00000506161 USHBP1Q8N6Y0 703 aa23.27■■□□□ 1.32
PDLIM7-215ENST00000506161 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
PDLIM7-215ENST00000506161 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
PDLIM7-215ENST00000506161 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
PDLIM7-215ENST00000506161 NBPF6Q5VWK0 638 aa23.26■■□□□ 1.31
PDLIM7-215ENST00000506161 NBPF4Q96M43 638 aa23.26■■□□□ 1.31
PDLIM7-215ENST00000506161 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
PDLIM7-215ENST00000506161 CASZ1Q86V15 1759 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms