RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 C8orf58Q8NAV2 365 aa9.57□□□□□ -0.88
PPARGC1A-204ENST00000506055 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
PPARGC1A-204ENST00000506055 ATP7BP35670 1465 aa9.57□□□□□ -0.88
PPARGC1A-204ENST00000506055 MAP2P11137 1827 aaKnown RBP9.57□□□□□ -0.88
PPARGC1A-204ENST00000506055 ESF1Q9H501 851 aaKnown RBP9.57□□□□□ -0.88
PPARGC1A-204ENST00000506055 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 PPP6R1Q9UPN7 881 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 CCDC61Q9Y6R9 512 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 HSCBQ8IWL3 235 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 ARHGAP45Q92619 1136 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 CFAP44Q96MT7 982 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 ARXQ96QS3 562 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 CPSF1Q10570 1443 aaKnown RBP9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 TSPOAP1O95153 1857 aa9.56□□□□□ -0.88
PPARGC1A-204ENST00000506055 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 CHMP4BQ9H444 224 aaKnown RBP9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 CDC42BPGQ6DT37 1551 aa9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 SIRT2Q8IXJ6 389 aa9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 GCC1Q96CN9 775 aa9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
PPARGC1A-204ENST00000506055 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
PPARGC1A-204ENST00000506055 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
PPARGC1A-204ENST00000506055 DLC1Q96QB1 1528 aa9.54□□□□□ -0.88
PPARGC1A-204ENST00000506055 BMP2KLQ5H9B9 411 aa9.54□□□□□ -0.88
PPARGC1A-204ENST00000506055 CHMP5Q9NZZ3 219 aa9.54□□□□□ -0.88
PPARGC1A-204ENST00000506055 MCM4P33991 863 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 AEBP1Q8IUX7 1158 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 SOX12O15370 315 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 AATKQ6ZMQ8 1374 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 ABCC4O15439 1325 aa9.53□□□□□ -0.88
PPARGC1A-204ENST00000506055 KRT24Q2M2I5 525 aa9.52□□□□□ -0.88
PPARGC1A-204ENST00000506055 RIMBP3CA6NJZ7 1639 aa9.52□□□□□ -0.88
PPARGC1A-204ENST00000506055 RIMBP3BA6NNM3 1639 aa9.52□□□□□ -0.88
PPARGC1A-204ENST00000506055 RIMBP3Q9UFD9 1639 aa9.52□□□□□ -0.88
PPARGC1A-204ENST00000506055 CPS1P31327 1500 aa9.52□□□□□ -0.88
PPARGC1A-204ENST00000506055 CDK12Q9NYV4 1490 aaPredicted RBP9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 HDGFP51858 240 aaKnown RBP9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 API5Q9BZZ5 524 aaKnown RBP9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 SPATA31D1Q6ZQQ2 1576 aa9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 PTCH1Q13635 1447 aa9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 MCM10Q7L590 875 aa9.52□□□□□ -0.89
PPARGC1A-204ENST00000506055 PIK3R4Q99570 1358 aa9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 EIF4A2Q14240 407 aaKnown RBP9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 SETD1AO15047 1707 aaKnown RBP9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
PPARGC1A-204ENST00000506055 AGLP35573 1532 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 TRAK2O60296 914 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 ACEP12821 1306 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 APBB1O00213 710 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 L1TD1Q5T7N2 865 aaKnown RBP9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 KIF2CQ99661 725 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 RBM42Q9BTD8 480 aaKnown RBP9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 DIP2BQ9P265 1576 aa9.5□□□□□ -0.89
PPARGC1A-204ENST00000506055 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 SNX21Q969T3 373 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 MIS18AQ9NYP9 233 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 CD2BP2O95400 341 aaKnown RBP9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
PPARGC1A-204ENST00000506055 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 DLG5Q8TDM6 1919 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 CHL1O00533 1208 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 DCTPP1Q9H773 170 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 REREQ9P2R6 1566 aa9.48□□□□□ -0.89
PPARGC1A-204ENST00000506055 CDC45O75419 566 aa9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 XRCC6P12956 609 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 TNPO1Q92973 898 aaKnown RBP9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 DDIT3P35638 169 aa9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 SLC26A8Q96RN1 970 aa9.47□□□□□ -0.89
PPARGC1A-204ENST00000506055 FOXO3O43524 673 aa9.46□□□□□ -0.89
PPARGC1A-204ENST00000506055 PLPPR3Q6T4P5 718 aa9.46□□□□□ -0.89
PPARGC1A-204ENST00000506055 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.89
PPARGC1A-204ENST00000506055 TNRQ92752 1358 aa9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 TMEM2Q9UHN6 1383 aa9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 SMARCA5O60264 1052 aaPredicted RBP9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 LTKP29376 864 aa9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
PPARGC1A-204ENST00000506055 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 NCOA3Q9Y6Q9 1424 aa9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1A-204ENST00000506055 SLC4A10Q6U841 1118 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms