RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZBBXA8MT70 800 aa7.7□□□□□ -1.18
HMGB1P29-201ENST00000505659 SOCS7O14512 581 aa7.7□□□□□ -1.18
HMGB1P29-201ENST00000505659 ZIC2O95409 532 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P29-201ENST00000505659 RAB15P59190 212 aa7.7□□□□□ -1.18
HMGB1P29-201ENST00000505659 MCM6Q14566 821 aa7.7□□□□□ -1.18
HMGB1P29-201ENST00000505659 INTS6LQ5JSJ4 861 aaKnown RBP7.69□□□□□ -1.18
HMGB1P29-201ENST00000505659 DZIP3Q86Y13 1208 aaKnown RBP7.68□□□□□ -1.18
HMGB1P29-201ENST00000505659 CCDC116Q8IYX3 515 aa7.68□□□□□ -1.18
HMGB1P29-201ENST00000505659 GDPD2Q9HCC8 539 aa7.68□□□□□ -1.18
HMGB1P29-201ENST00000505659 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
HMGB1P29-201ENST00000505659 SNRPBP14678 240 aaKnown RBP7.67□□□□□ -1.18
HMGB1P29-201ENST00000505659 IRF5Q13568 498 aa7.67□□□□□ -1.18
HMGB1P29-201ENST00000505659 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
HMGB1P29-201ENST00000505659 PPP1R26Q5T8A7 1209 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P29-201ENST00000505659 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P29-201ENST00000505659 NR1H3Q13133 447 aa7.66□□□□□ -1.18
HMGB1P29-201ENST00000505659 APBB1O00213 710 aa7.65□□□□□ -1.18
HMGB1P29-201ENST00000505659 CBLBQ13191 982 aa7.65□□□□□ -1.18
HMGB1P29-201ENST00000505659 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
HMGB1P29-201ENST00000505659 TMPRSS4Q9NRS4 437 aa7.65□□□□□ -1.18
HMGB1P29-201ENST00000505659 CDV3Q9UKY7 258 aaKnown RBP7.65□□□□□ -1.18
HMGB1P29-201ENST00000505659 GIGYF1O75420 1035 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 ABL2P42684 1182 aa7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 MRPL14Q6P1L8 145 aaKnown RBP7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 POM121Q96HA1 1249 aa7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 TRIM47Q96LD4 638 aa7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 ZFP42Q96MM3 310 aa7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 PURBQ96QR8 312 aaKnown RBP7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 EMILIN1Q9Y6C2 1016 aa7.64□□□□□ -1.19
HMGB1P29-201ENST00000505659 ESPNB1AK53 854 aa7.63□□□□□ -1.19
HMGB1P29-201ENST00000505659 ERVH48-1M5A8F1 160 aa7.63□□□□□ -1.19
HMGB1P29-201ENST00000505659 C6orf118Q5T5N4 469 aa7.63□□□□□ -1.19
HMGB1P29-201ENST00000505659 MEIOBQ8N635 442 aa7.63□□□□□ -1.19
HMGB1P29-201ENST00000505659 VAC14Q08AM6 782 aa7.62□□□□□ -1.19
HMGB1P29-201ENST00000505659 ZNF784Q8NCA9 323 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P29-201ENST00000505659 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P29-201ENST00000505659 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
HMGB1P29-201ENST00000505659 AGBL1Q96MI9 1066 aa7.61□□□□□ -1.19
HMGB1P29-201ENST00000505659 SENP2Q9HC62 589 aa7.61□□□□□ -1.19
HMGB1P29-201ENST00000505659 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
HMGB1P29-201ENST00000505659 SOBPA7XYQ1 873 aa7.6□□□□□ -1.19
HMGB1P29-201ENST00000505659 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
HMGB1P29-201ENST00000505659 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
HMGB1P29-201ENST00000505659 LILRA1O75019 489 aa7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 BMP2P12643 396 aa7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 ADD1P35611 737 aaKnown RBP7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 SCARF1Q14162 830 aa7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 PRM3Q9NNZ6 103 aa7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 CYLDQ9NQC7 956 aa7.59□□□□□ -1.19
HMGB1P29-201ENST00000505659 Q6ZVU0 165 aa7.58□□□□□ -1.2
HMGB1P29-201ENST00000505659 KIFC2Q96AC6 838 aa7.58□□□□□ -1.2
HMGB1P29-201ENST00000505659 RELBQ01201 579 aa7.57□□□□□ -1.2
HMGB1P29-201ENST00000505659 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P29-201ENST00000505659 SCTRP47872 440 aa7.56□□□□□ -1.2
HMGB1P29-201ENST00000505659 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
HMGB1P29-201ENST00000505659 KDF1Q8NAX2 398 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P29-201ENST00000505659 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
HMGB1P29-201ENST00000505659 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
HMGB1P29-201ENST00000505659 UPP2O95045 317 aa7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 UBTFP17480 764 aaKnown RBP7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 FLIIQ13045 1269 aa7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 CCDC85AQ96PX6 553 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P29-201ENST00000505659 ADH1AP07327 375 aa7.54□□□□□ -1.2
HMGB1P29-201ENST00000505659 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P29-201ENST00000505659 TSGA10IPQ3SY00 556 aa7.54□□□□□ -1.2
HMGB1P29-201ENST00000505659 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P29-201ENST00000505659 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
HMGB1P29-201ENST00000505659 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
HMGB1P29-201ENST00000505659 INSM2Q96T92 566 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P29-201ENST00000505659 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
HMGB1P29-201ENST00000505659 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 POM121CA8CG34 1229 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 SPINT1O43278 529 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 CTSOP43234 321 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 VEGFBP49765 207 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 MCCD1P59942 119 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 WASHC4Q2M389 1173 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
HMGB1P29-201ENST00000505659 RAD21O60216 631 aa7.51□□□□□ -1.21
HMGB1P29-201ENST00000505659 MAN1A2O60476 641 aa7.51□□□□□ -1.21
HMGB1P29-201ENST00000505659 RNF20Q5VTR2 975 aa7.51□□□□□ -1.21
HMGB1P29-201ENST00000505659 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
HMGB1P29-201ENST00000505659 TTLL8A6PVC2 850 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 PTGIRP43119 386 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 NFX1Q12986 1120 aaKnown RBP7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
HMGB1P29-201ENST00000505659 TERTO14746 1132 aaKnown RBP7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 SLFNL1Q499Z3 407 aa7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 FOXD4L5Q5VV16 416 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 ADAMTS19Q8TE59 1207 aa7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 POLMQ9NP87 494 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P29-201ENST00000505659 ATP5J2-PTCD1G3V325 749 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms