RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
CHD1-203ENST00000505657 APBB1O00213 710 aa8.23□□□□□ -1.09
CHD1-203ENST00000505657 ABL2P42684 1182 aa8.23□□□□□ -1.09
CHD1-203ENST00000505657 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
CHD1-203ENST00000505657 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
CHD1-203ENST00000505657 ZC3H4Q9UPT8 1303 aaKnown RBP8.23□□□□□ -1.09
CHD1-203ENST00000505657 GPKOWQ92917 476 aaPredicted RBP eCLIP8.22□□□□□ -1.09
CHD1-203ENST00000505657 FBXO45P0C2W1 286 aa8.21□□□□□ -1.1
CHD1-203ENST00000505657 CARD14Q9BXL6 1004 aa8.21□□□□□ -1.1
CHD1-203ENST00000505657 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
CHD1-203ENST00000505657 AGERQ15109 404 aa8.2□□□□□ -1.1
CHD1-203ENST00000505657 PNMA1Q8ND90 353 aa8.2□□□□□ -1.1
CHD1-203ENST00000505657 ARHGAP9Q9BRR9 750 aa8.2□□□□□ -1.1
CHD1-203ENST00000505657 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
CHD1-203ENST00000505657 SOBPA7XYQ1 873 aa8.19□□□□□ -1.1
CHD1-203ENST00000505657 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
CHD1-203ENST00000505657 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
CHD1-203ENST00000505657 ZBBXA8MT70 800 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 PTK2Q05397 1052 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
CHD1-203ENST00000505657 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 GPSM3Q9Y4H4 160 aa8.18□□□□□ -1.1
CHD1-203ENST00000505657 RAD21O60216 631 aa8.17□□□□□ -1.1
CHD1-203ENST00000505657 NR1H3Q13133 447 aa8.17□□□□□ -1.1
CHD1-203ENST00000505657 NNTQ13423 1086 aa8.17□□□□□ -1.1
CHD1-203ENST00000505657 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
CHD1-203ENST00000505657 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
CHD1-203ENST00000505657 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
CHD1-203ENST00000505657 PROSER2Q86WR7 435 aaPredicted RBP8.16□□□□□ -1.1
CHD1-203ENST00000505657 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
CHD1-203ENST00000505657 A6NJR5 290 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 POM121CA8CG34 1229 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 TIMP2P16035 220 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 SCARF1Q14162 830 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
CHD1-203ENST00000505657 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
CHD1-203ENST00000505657 SUZ12Q15022 739 aaKnown RBP8.14□□□□□ -1.11
CHD1-203ENST00000505657 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
CHD1-203ENST00000505657 MPNDQ8N594 471 aa8.14□□□□□ -1.11
CHD1-203ENST00000505657 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
CHD1-203ENST00000505657 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
CHD1-203ENST00000505657 KLF16Q9BXK1 252 aaPredicted RBP8.13□□□□□ -1.11
CHD1-203ENST00000505657 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
CHD1-203ENST00000505657 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
CHD1-203ENST00000505657 PCDHB9Q9Y5E1 797 aa8.12□□□□□ -1.11
CHD1-203ENST00000505657 ADH1CP00326 375 aa8.11□□□□□ -1.11
CHD1-203ENST00000505657 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
CHD1-203ENST00000505657 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
CHD1-203ENST00000505657 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
CHD1-203ENST00000505657 GRM5P41594 1212 aa8.1□□□□□ -1.11
CHD1-203ENST00000505657 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
CHD1-203ENST00000505657 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
CHD1-203ENST00000505657 TRAK2O60296 914 aa8.09□□□□□ -1.11
CHD1-203ENST00000505657 GSK3AP49840 483 aa8.09□□□□□ -1.11
CHD1-203ENST00000505657 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
CHD1-203ENST00000505657 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
CHD1-203ENST00000505657 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
CHD1-203ENST00000505657 MAP4K5Q9Y4K4 846 aa8.09□□□□□ -1.11
CHD1-203ENST00000505657 NR3C2P08235 984 aa8.08□□□□□ -1.12
CHD1-203ENST00000505657 FSHRP23945 695 aa8.08□□□□□ -1.12
CHD1-203ENST00000505657 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
CHD1-203ENST00000505657 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
CHD1-203ENST00000505657 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
CHD1-203ENST00000505657 MAN1A2O60476 641 aa8.07□□□□□ -1.12
CHD1-203ENST00000505657 PPFIA3O75145 1194 aa8.07□□□□□ -1.12
CHD1-203ENST00000505657 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
CHD1-203ENST00000505657 WWC1Q8IX03 1113 aa8.07□□□□□ -1.12
CHD1-203ENST00000505657 KCTD15Q96SI1 283 aaPredicted RBP8.07□□□□□ -1.12
CHD1-203ENST00000505657 GIGYF1O75420 1035 aaPredicted RBP8.06□□□□□ -1.12
CHD1-203ENST00000505657 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
CHD1-203ENST00000505657 INTS6LQ5JSJ4 861 aaKnown RBP8.06□□□□□ -1.12
CHD1-203ENST00000505657 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
CHD1-203ENST00000505657 ALG2Q9H553 416 aa8.06□□□□□ -1.12
CHD1-203ENST00000505657 ZNF777Q9ULD5 760 aaPredicted RBP8.06□□□□□ -1.12
CHD1-203ENST00000505657 ESPNB1AK53 854 aa8.05□□□□□ -1.12
CHD1-203ENST00000505657 RAB15P59190 212 aa8.05□□□□□ -1.12
CHD1-203ENST00000505657 GLMNQ92990 594 aa8.04□□□□□ -1.12
CHD1-203ENST00000505657 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
CHD1-203ENST00000505657 ARID3CA6NKF2 412 aa8.03□□□□□ -1.12
CHD1-203ENST00000505657 PIK3CDO00329 1044 aa8.03□□□□□ -1.12
CHD1-203ENST00000505657 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
CHD1-203ENST00000505657 NBPF20Q3BBV1 942 aa8.03□□□□□ -1.12
CHD1-203ENST00000505657 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
CHD1-203ENST00000505657 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
CHD1-203ENST00000505657 BMP2P12643 396 aa8.02□□□□□ -1.13
CHD1-203ENST00000505657 SOX11P35716 441 aa8.02□□□□□ -1.13
CHD1-203ENST00000505657 NR5A1Q13285 461 aa8.02□□□□□ -1.13
CHD1-203ENST00000505657 TMEM151AQ8N4L1 468 aa8.02□□□□□ -1.13
CHD1-203ENST00000505657 GPR161Q8N6U8 529 aaKnown RBP8.02□□□□□ -1.13
CHD1-203ENST00000505657 UCN2Q96RP3 112 aa8.02□□□□□ -1.13
CHD1-203ENST00000505657 MCCD1P59942 119 aaPredicted RBP8.01□□□□□ -1.13
CHD1-203ENST00000505657 KRT76Q01546 638 aa8.01□□□□□ -1.13
CHD1-203ENST00000505657 TSGA10IPQ3SY00 556 aa8.01□□□□□ -1.13
CHD1-203ENST00000505657 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
CHD1-203ENST00000505657 PHTF2Q8N3S3 785 aa8.01□□□□□ -1.13
CHD1-203ENST00000505657 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms