RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
SNHG4-202ENST00000505522 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
SNHG4-202ENST00000505522 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
SNHG4-202ENST00000505522 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SNHG4-202ENST00000505522 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
SNHG4-202ENST00000505522 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
SNHG4-202ENST00000505522 WNK3Q9BYP7 1800 aa17.37■□□□□ 0.37
SNHG4-202ENST00000505522 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
SNHG4-202ENST00000505522 NUP188Q5SRE5 1749 aa17.36■□□□□ 0.37
SNHG4-202ENST00000505522 DDB1Q16531 1140 aa17.36■□□□□ 0.37
SNHG4-202ENST00000505522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNHG4-202ENST00000505522 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
SNHG4-202ENST00000505522 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
SNHG4-202ENST00000505522 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
SNHG4-202ENST00000505522 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
SNHG4-202ENST00000505522 NME9Q86XW9 330 aa17.34■□□□□ 0.37
SNHG4-202ENST00000505522 SBF2Q86WG5 1849 aa17.33■□□□□ 0.37
SNHG4-202ENST00000505522 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
SNHG4-202ENST00000505522 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
SNHG4-202ENST00000505522 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
SNHG4-202ENST00000505522 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
SNHG4-202ENST00000505522 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
SNHG4-202ENST00000505522 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
SNHG4-202ENST00000505522 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
SNHG4-202ENST00000505522 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SNHG4-202ENST00000505522 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
SNHG4-202ENST00000505522 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
SNHG4-202ENST00000505522 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
SNHG4-202ENST00000505522 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
SNHG4-202ENST00000505522 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
SNHG4-202ENST00000505522 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
SNHG4-202ENST00000505522 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
SNHG4-202ENST00000505522 LTN1O94822 1766 aa17.28■□□□□ 0.36
SNHG4-202ENST00000505522 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
SNHG4-202ENST00000505522 TESK2Q96S53 571 aa17.28■□□□□ 0.36
SNHG4-202ENST00000505522 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
SNHG4-202ENST00000505522 BCL9O00512 1426 aa17.28■□□□□ 0.36
SNHG4-202ENST00000505522 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
SNHG4-202ENST00000505522 PLSCR1O15162 318 aa17.27■□□□□ 0.36
SNHG4-202ENST00000505522 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
SNHG4-202ENST00000505522 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
SNHG4-202ENST00000505522 ERBB3P21860 1342 aa17.26■□□□□ 0.35
SNHG4-202ENST00000505522 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
SNHG4-202ENST00000505522 EXOC5O00471 708 aa17.26■□□□□ 0.35
SNHG4-202ENST00000505522 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
SNHG4-202ENST00000505522 PROM2Q8N271 834 aa17.24■□□□□ 0.35
SNHG4-202ENST00000505522 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
SNHG4-202ENST00000505522 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
SNHG4-202ENST00000505522 ANKRD24Q8TF21 1146 aa17.23■□□□□ 0.35
SNHG4-202ENST00000505522 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
SNHG4-202ENST00000505522 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
SNHG4-202ENST00000505522 KCNQ2O43526 872 aa17.21■□□□□ 0.35
SNHG4-202ENST00000505522 IL2RBP14784 551 aa17.2■□□□□ 0.34
SNHG4-202ENST00000505522 IP6K1Q92551 441 aa17.19■□□□□ 0.34
SNHG4-202ENST00000505522 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
SNHG4-202ENST00000505522 NHSQ6T4R5 1651 aa17.19■□□□□ 0.34
SNHG4-202ENST00000505522 CASZ1Q86V15 1759 aa17.18■□□□□ 0.34
SNHG4-202ENST00000505522 FBLN1P23142 703 aa17.18■□□□□ 0.34
SNHG4-202ENST00000505522 TXNRD1Q16881 649 aa17.18■□□□□ 0.34
SNHG4-202ENST00000505522 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
SNHG4-202ENST00000505522 COG3Q96JB2 828 aa17.17■□□□□ 0.34
SNHG4-202ENST00000505522 PDGFDQ9GZP0 370 aaPredicted RBP17.17■□□□□ 0.34
SNHG4-202ENST00000505522 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
SNHG4-202ENST00000505522 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
SNHG4-202ENST00000505522 LTV1Q96GA3 475 aaPredicted RBP17.16■□□□□ 0.34
SNHG4-202ENST00000505522 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
SNHG4-202ENST00000505522 USP47Q96K76 1375 aa17.15■□□□□ 0.34
SNHG4-202ENST00000505522 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
SNHG4-202ENST00000505522 TMF1P82094 1093 aa17.14■□□□□ 0.33
SNHG4-202ENST00000505522 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
SNHG4-202ENST00000505522 HOXC9P31274 260 aa17.13■□□□□ 0.33
SNHG4-202ENST00000505522 BTAF1O14981 1849 aa17.12■□□□□ 0.33
SNHG4-202ENST00000505522 AMPHP49418 695 aa17.12■□□□□ 0.33
SNHG4-202ENST00000505522 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
SNHG4-202ENST00000505522 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
SNHG4-202ENST00000505522 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
SNHG4-202ENST00000505522 FYB1O15117 783 aa17.11■□□□□ 0.33
SNHG4-202ENST00000505522 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
SNHG4-202ENST00000505522 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
SNHG4-202ENST00000505522 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
SNHG4-202ENST00000505522 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
SNHG4-202ENST00000505522 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
SNHG4-202ENST00000505522 PAPPAQ13219 1627 aa17.09■□□□□ 0.33
SNHG4-202ENST00000505522 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
SNHG4-202ENST00000505522 PTGER2P43116 358 aa17.08■□□□□ 0.32
SNHG4-202ENST00000505522 MYOM1P52179 1685 aa17.07■□□□□ 0.32
SNHG4-202ENST00000505522 MEGF6O75095 1541 aa17.07■□□□□ 0.32
SNHG4-202ENST00000505522 LRRC4BQ9NT99 713 aa17.07■□□□□ 0.32
SNHG4-202ENST00000505522 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
SNHG4-202ENST00000505522 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
SNHG4-202ENST00000505522 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
SNHG4-202ENST00000505522 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
SNHG4-202ENST00000505522 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
SNHG4-202ENST00000505522 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
SNHG4-202ENST00000505522 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
SNHG4-202ENST00000505522 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
SNHG4-202ENST00000505522 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
SNHG4-202ENST00000505522 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
SNHG4-202ENST00000505522 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
SNHG4-202ENST00000505522 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms