RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 PLSCR1O15162 318 aa15.8■□□□□ 0.12
UBE2D3-219ENST00000505207 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
UBE2D3-219ENST00000505207 CARD10Q9BWT7 1032 aa15.79■□□□□ 0.12
UBE2D3-219ENST00000505207 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-219ENST00000505207 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
UBE2D3-219ENST00000505207 EXOC5O00471 708 aa15.78■□□□□ 0.12
UBE2D3-219ENST00000505207 SOX12O15370 315 aa15.78■□□□□ 0.12
UBE2D3-219ENST00000505207 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
UBE2D3-219ENST00000505207 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-219ENST00000505207 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
UBE2D3-219ENST00000505207 HDGFL2Q7Z4V5 671 aaPredicted RBP15.77■□□□□ 0.12
UBE2D3-219ENST00000505207 CARD11Q9BXL7 1154 aa15.77■□□□□ 0.12
UBE2D3-219ENST00000505207 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
UBE2D3-219ENST00000505207 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.11
UBE2D3-219ENST00000505207 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-219ENST00000505207 SBNO2Q9Y2G9 1366 aa15.75■□□□□ 0.11
UBE2D3-219ENST00000505207 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
UBE2D3-219ENST00000505207 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
UBE2D3-219ENST00000505207 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
UBE2D3-219ENST00000505207 KCNQ2O43526 872 aa15.74■□□□□ 0.11
UBE2D3-219ENST00000505207 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
UBE2D3-219ENST00000505207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBE2D3-219ENST00000505207 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
UBE2D3-219ENST00000505207 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
UBE2D3-219ENST00000505207 MARCH10Q8NA82 808 aaPredicted RBP15.73■□□□□ 0.11
UBE2D3-219ENST00000505207 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
UBE2D3-219ENST00000505207 BCL9O00512 1426 aa15.73■□□□□ 0.11
UBE2D3-219ENST00000505207 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
UBE2D3-219ENST00000505207 TONSLQ96HA7 1378 aa15.72■□□□□ 0.11
UBE2D3-219ENST00000505207 RREB1Q92766 1687 aa15.71■□□□□ 0.11
UBE2D3-219ENST00000505207 COL18A1P39060 1754 aa15.71■□□□□ 0.11
UBE2D3-219ENST00000505207 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
UBE2D3-219ENST00000505207 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
UBE2D3-219ENST00000505207 ABCC6O95255 1503 aa15.69■□□□□ 0.1
UBE2D3-219ENST00000505207 NUP188Q5SRE5 1749 aa15.69■□□□□ 0.1
UBE2D3-219ENST00000505207 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
UBE2D3-219ENST00000505207 AKAP12Q02952 1782 aa15.69■□□□□ 0.1
UBE2D3-219ENST00000505207 NME9Q86XW9 330 aa15.68■□□□□ 0.1
UBE2D3-219ENST00000505207 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
UBE2D3-219ENST00000505207 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
UBE2D3-219ENST00000505207 PEAK1Q9H792 1746 aa15.68■□□□□ 0.1
UBE2D3-219ENST00000505207 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
UBE2D3-219ENST00000505207 IL2RBP14784 551 aa15.67■□□□□ 0.1
UBE2D3-219ENST00000505207 NFAT5O94916 1531 aa15.67■□□□□ 0.1
UBE2D3-219ENST00000505207 EDC4Q6P2E9 1401 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-219ENST00000505207 ERBB3P21860 1342 aa15.67■□□□□ 0.1
UBE2D3-219ENST00000505207 NINLQ9Y2I6 1382 aa15.66■□□□□ 0.1
UBE2D3-219ENST00000505207 TXNRD1Q16881 649 aa15.66■□□□□ 0.1
UBE2D3-219ENST00000505207 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
UBE2D3-219ENST00000505207 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
UBE2D3-219ENST00000505207 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
UBE2D3-219ENST00000505207 PTF1AQ7RTS3 328 aa15.65■□□□□ 0.1
UBE2D3-219ENST00000505207 PROM2Q8N271 834 aa15.65■□□□□ 0.1
UBE2D3-219ENST00000505207 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
UBE2D3-219ENST00000505207 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
UBE2D3-219ENST00000505207 ANO8Q9HCE9 1232 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-219ENST00000505207 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
UBE2D3-219ENST00000505207 YY1P25490 414 aa15.63■□□□□ 0.09
UBE2D3-219ENST00000505207 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
UBE2D3-219ENST00000505207 IP6K1Q92551 441 aa15.63■□□□□ 0.09
UBE2D3-219ENST00000505207 COG3Q96JB2 828 aa15.63■□□□□ 0.09
UBE2D3-219ENST00000505207 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
UBE2D3-219ENST00000505207 RGPD5Q99666 1765 aa15.62■□□□□ 0.09
UBE2D3-219ENST00000505207 CD163L1Q9NR16 1453 aa15.61■□□□□ 0.09
UBE2D3-219ENST00000505207 ZBTB7AO95365 584 aa15.61■□□□□ 0.09
UBE2D3-219ENST00000505207 ACSBG1Q96GR2 724 aa15.61■□□□□ 0.09
UBE2D3-219ENST00000505207 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
UBE2D3-219ENST00000505207 A0A1W2PP64 1363 aa15.61■□□□□ 0.09
UBE2D3-219ENST00000505207 ST20-MTHFSA0A0A6YYL1 179 aa15.6■□□□□ 0.09
UBE2D3-219ENST00000505207 AMPHP49418 695 aa15.59■□□□□ 0.09
UBE2D3-219ENST00000505207 MTFR1LQ9H019 292 aa15.59■□□□□ 0.09
UBE2D3-219ENST00000505207 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
UBE2D3-219ENST00000505207 KCNA4P22459 653 aa15.58■□□□□ 0.08
UBE2D3-219ENST00000505207 LTV1Q96GA3 475 aaPredicted RBP15.58■□□□□ 0.08
UBE2D3-219ENST00000505207 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
UBE2D3-219ENST00000505207 TMF1P82094 1093 aa15.57■□□□□ 0.08
UBE2D3-219ENST00000505207 DDX54Q8TDD1 881 aaKnown RBP15.57■□□□□ 0.08
UBE2D3-219ENST00000505207 TESK2Q96S53 571 aa15.57■□□□□ 0.08
UBE2D3-219ENST00000505207 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
UBE2D3-219ENST00000505207 SLC27A3Q5K4L6 730 aa15.56■□□□□ 0.08
UBE2D3-219ENST00000505207 PTGER2P43116 358 aa15.55■□□□□ 0.08
UBE2D3-219ENST00000505207 PDGFDQ9GZP0 370 aaPredicted RBP15.55■□□□□ 0.08
UBE2D3-219ENST00000505207 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
UBE2D3-219ENST00000505207 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-219ENST00000505207 HOXC9P31274 260 aa15.54■□□□□ 0.08
UBE2D3-219ENST00000505207 KAT6BQ8WYB5 2073 aa15.54■□□□□ 0.08
UBE2D3-219ENST00000505207 LTN1O94822 1766 aa15.54■□□□□ 0.08
UBE2D3-219ENST00000505207 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
UBE2D3-219ENST00000505207 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-219ENST00000505207 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
UBE2D3-219ENST00000505207 NHSQ6T4R5 1651 aa15.53■□□□□ 0.08
UBE2D3-219ENST00000505207 CASZ1Q86V15 1759 aa15.52■□□□□ 0.08
UBE2D3-219ENST00000505207 SYTL4Q96C24 671 aaPredicted RBP15.52■□□□□ 0.08
UBE2D3-219ENST00000505207 ARXQ96QS3 562 aa15.52■□□□□ 0.08
UBE2D3-219ENST00000505207 SYT17Q9BSW7 474 aa15.52■□□□□ 0.08
UBE2D3-219ENST00000505207 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
UBE2D3-219ENST00000505207 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
UBE2D3-219ENST00000505207 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
UBE2D3-219ENST00000505207 RTL1A6NKG5 1358 aa15.5■□□□□ 0.07
UBE2D3-219ENST00000505207 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms