RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 LRP6O75581 1613 aa13.86□□□□□ -0.19
RFC1-210ENST00000505077 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
RFC1-210ENST00000505077 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
RFC1-210ENST00000505077 ARHGEF25Q86VW2 580 aa13.85□□□□□ -0.19
RFC1-210ENST00000505077 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
RFC1-210ENST00000505077 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
RFC1-210ENST00000505077 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
RFC1-210ENST00000505077 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
RFC1-210ENST00000505077 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
RFC1-210ENST00000505077 SOX12O15370 315 aa13.82□□□□□ -0.2
RFC1-210ENST00000505077 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
RFC1-210ENST00000505077 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
RFC1-210ENST00000505077 PRDM11Q9NQV5 511 aa13.82□□□□□ -0.2
RFC1-210ENST00000505077 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
RFC1-210ENST00000505077 COL5A2P05997 1499 aaPredicted RBP13.81□□□□□ -0.2
RFC1-210ENST00000505077 SLIT2O94813 1529 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 AMPHP49418 695 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 MTHFSP49914 203 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 ZC3H6P61129 1189 aaKnown RBP13.81□□□□□ -0.2
RFC1-210ENST00000505077 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
RFC1-210ENST00000505077 IP6K1Q92551 441 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
RFC1-210ENST00000505077 HOXC9P31274 260 aa13.8□□□□□ -0.2
RFC1-210ENST00000505077 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
RFC1-210ENST00000505077 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
RFC1-210ENST00000505077 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
RFC1-210ENST00000505077 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
RFC1-210ENST00000505077 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
RFC1-210ENST00000505077 PPM1GO15355 546 aaPredicted RBP13.77□□□□□ -0.21
RFC1-210ENST00000505077 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
RFC1-210ENST00000505077 ERBB3P21860 1342 aa13.77□□□□□ -0.21
RFC1-210ENST00000505077 FBLN1P23142 703 aa13.77□□□□□ -0.21
RFC1-210ENST00000505077 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
RFC1-210ENST00000505077 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
RFC1-210ENST00000505077 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
RFC1-210ENST00000505077 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
RFC1-210ENST00000505077 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
RFC1-210ENST00000505077 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
RFC1-210ENST00000505077 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
RFC1-210ENST00000505077 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
RFC1-210ENST00000505077 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
RFC1-210ENST00000505077 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
RFC1-210ENST00000505077 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 CRB1P82279 1406 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 WDR17Q8IZU2 1322 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 MIER1Q8N108 512 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
RFC1-210ENST00000505077 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
RFC1-210ENST00000505077 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
RFC1-210ENST00000505077 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
RFC1-210ENST00000505077 KDRP35968 1356 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 IL13P35225 146 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 EIF4A2Q14240 407 aaKnown RBP13.72□□□□□ -0.21
RFC1-210ENST00000505077 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
RFC1-210ENST00000505077 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
RFC1-210ENST00000505077 FKBP8Q14318 412 aa13.71□□□□□ -0.21
RFC1-210ENST00000505077 THSD7AQ9UPZ6 1657 aa13.7□□□□□ -0.22
RFC1-210ENST00000505077 MSH5O43196 834 aa13.7□□□□□ -0.22
RFC1-210ENST00000505077 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
RFC1-210ENST00000505077 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
RFC1-210ENST00000505077 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
RFC1-210ENST00000505077 LRRC37A3O60309 1634 aa13.7□□□□□ -0.22
RFC1-210ENST00000505077 AFF2P51816 1311 aa13.69□□□□□ -0.22
RFC1-210ENST00000505077 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
RFC1-210ENST00000505077 EVA1CP58658 441 aa13.69□□□□□ -0.22
RFC1-210ENST00000505077 ATRNO75882 1429 aa13.69□□□□□ -0.22
RFC1-210ENST00000505077 GLI3P10071 1580 aa13.69□□□□□ -0.22
RFC1-210ENST00000505077 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
RFC1-210ENST00000505077 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
RFC1-210ENST00000505077 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
RFC1-210ENST00000505077 USP21Q9UK80 565 aa13.68□□□□□ -0.22
RFC1-210ENST00000505077 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
RFC1-210ENST00000505077 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
RFC1-210ENST00000505077 VPS72Q15906 364 aa13.67□□□□□ -0.22
RFC1-210ENST00000505077 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
RFC1-210ENST00000505077 ZNF772Q68DY9 489 aaPredicted RBP13.67□□□□□ -0.22
RFC1-210ENST00000505077 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
RFC1-210ENST00000505077 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
RFC1-210ENST00000505077 EYA1Q99502 592 aa13.67□□□□□ -0.22
RFC1-210ENST00000505077 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 FCHSD2O94868 740 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
RFC1-210ENST00000505077 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
RFC1-210ENST00000505077 STRN4Q9NRL3 753 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
RFC1-210ENST00000505077 BRWD3Q6RI45 1802 aa13.66□□□□□ -0.22
RFC1-210ENST00000505077 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
RFC1-210ENST00000505077 DISP2A7MBM2 1401 aa13.65□□□□□ -0.22
RFC1-210ENST00000505077 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
RFC1-210ENST00000505077 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
RFC1-210ENST00000505077 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms