RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1B-203ENST00000505017 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1B-203ENST00000505017 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
DEPDC1B-203ENST00000505017 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
DEPDC1B-203ENST00000505017 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
DEPDC1B-203ENST00000505017 VEGFBP49765 207 aa11.17□□□□□ -0.62
DEPDC1B-203ENST00000505017 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1B-203ENST00000505017 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1B-203ENST00000505017 SCARF1Q14162 830 aa11.16□□□□□ -0.62
DEPDC1B-203ENST00000505017 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
DEPDC1B-203ENST00000505017 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
DEPDC1B-203ENST00000505017 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
DEPDC1B-203ENST00000505017 WIPF1O43516 503 aa11.15□□□□□ -0.62
DEPDC1B-203ENST00000505017 PTK2Q05397 1052 aa11.15□□□□□ -0.62
DEPDC1B-203ENST00000505017 CBLBQ13191 982 aa11.15□□□□□ -0.62
DEPDC1B-203ENST00000505017 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
DEPDC1B-203ENST00000505017 GPR37L1O60883 481 aa11.14□□□□□ -0.63
DEPDC1B-203ENST00000505017 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
DEPDC1B-203ENST00000505017 INTS6LQ5JSJ4 861 aaKnown RBP11.14□□□□□ -0.63
DEPDC1B-203ENST00000505017 SLC10A4Q96EP9 437 aa11.14□□□□□ -0.63
DEPDC1B-203ENST00000505017 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
DEPDC1B-203ENST00000505017 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
DEPDC1B-203ENST00000505017 H3BM21 787 aa11.12□□□□□ -0.63
DEPDC1B-203ENST00000505017 Q6ZVU0 165 aa11.12□□□□□ -0.63
DEPDC1B-203ENST00000505017 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1B-203ENST00000505017 DNMT3LQ9UJW3 386 aa11.11□□□□□ -0.63
DEPDC1B-203ENST00000505017 BMP2P12643 396 aa11.1□□□□□ -0.63
DEPDC1B-203ENST00000505017 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
DEPDC1B-203ENST00000505017 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
DEPDC1B-203ENST00000505017 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
DEPDC1B-203ENST00000505017 ESPNB1AK53 854 aa11.08□□□□□ -0.64
DEPDC1B-203ENST00000505017 GMPRP36959 345 aa11.08□□□□□ -0.64
DEPDC1B-203ENST00000505017 LORP23490 312 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1B-203ENST00000505017 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
DEPDC1B-203ENST00000505017 TSEN34Q9BSV6 310 aaKnown RBP11.07□□□□□ -0.64
DEPDC1B-203ENST00000505017 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
DEPDC1B-203ENST00000505017 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1B-203ENST00000505017 AGBL1Q96MI9 1066 aa11.06□□□□□ -0.64
DEPDC1B-203ENST00000505017 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
DEPDC1B-203ENST00000505017 ERVH48-1M5A8F1 160 aa11.05□□□□□ -0.64
DEPDC1B-203ENST00000505017 MAN1A2O60476 641 aa11.05□□□□□ -0.64
DEPDC1B-203ENST00000505017 LILRA1O75019 489 aa11.05□□□□□ -0.64
DEPDC1B-203ENST00000505017 ADD1P35611 737 aaKnown RBP11.05□□□□□ -0.64
DEPDC1B-203ENST00000505017 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
DEPDC1B-203ENST00000505017 SPINT1O43278 529 aa11.04□□□□□ -0.64
DEPDC1B-203ENST00000505017 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
DEPDC1B-203ENST00000505017 UPP2O95045 317 aa11.03□□□□□ -0.64
DEPDC1B-203ENST00000505017 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
DEPDC1B-203ENST00000505017 RAB15P59190 212 aa11.03□□□□□ -0.64
DEPDC1B-203ENST00000505017 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
DEPDC1B-203ENST00000505017 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
DEPDC1B-203ENST00000505017 ZBBXA8MT70 800 aa11.02□□□□□ -0.65
DEPDC1B-203ENST00000505017 DHX9Q08211 1270 aaKnown RBP11.02□□□□□ -0.65
DEPDC1B-203ENST00000505017 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
DEPDC1B-203ENST00000505017 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
DEPDC1B-203ENST00000505017 TTLL8A6PVC2 850 aa11.01□□□□□ -0.65
DEPDC1B-203ENST00000505017 VSIG8P0DPA2 414 aa11.01□□□□□ -0.65
DEPDC1B-203ENST00000505017 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
DEPDC1B-203ENST00000505017 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
DEPDC1B-203ENST00000505017 IRF7Q92985 503 aa11.01□□□□□ -0.65
DEPDC1B-203ENST00000505017 FIGNL2A6NMB9 653 aa11□□□□□ -0.65
DEPDC1B-203ENST00000505017 PPFIA3O75145 1194 aa11□□□□□ -0.65
DEPDC1B-203ENST00000505017 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
DEPDC1B-203ENST00000505017 RELBQ01201 579 aa10.99□□□□□ -0.65
DEPDC1B-203ENST00000505017 INSM2Q96T92 566 aaPredicted RBP10.99□□□□□ -0.65
DEPDC1B-203ENST00000505017 SOCS7O14512 581 aa10.98□□□□□ -0.65
DEPDC1B-203ENST00000505017 ZNF395Q9H8N7 513 aaPredicted RBP10.98□□□□□ -0.65
DEPDC1B-203ENST00000505017 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
DEPDC1B-203ENST00000505017 PTSQ03393 145 aa10.96□□□□□ -0.65
DEPDC1B-203ENST00000505017 ADH1AP07327 375 aa10.95□□□□□ -0.66
DEPDC1B-203ENST00000505017 INSM1Q01101 510 aaPredicted RBP10.95□□□□□ -0.66
DEPDC1B-203ENST00000505017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.95□□□□□ -0.66
DEPDC1B-203ENST00000505017 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
DEPDC1B-203ENST00000505017 NR1H3Q13133 447 aa10.94□□□□□ -0.66
DEPDC1B-203ENST00000505017 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
DEPDC1B-203ENST00000505017 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1B-203ENST00000505017 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-203ENST00000505017 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
DEPDC1B-203ENST00000505017 STK17AQ9UEE5 414 aa10.93□□□□□ -0.66
DEPDC1B-203ENST00000505017 PTGIRP43119 386 aa10.92□□□□□ -0.66
DEPDC1B-203ENST00000505017 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
DEPDC1B-203ENST00000505017 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
DEPDC1B-203ENST00000505017 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
DEPDC1B-203ENST00000505017 SCTRP47872 440 aa10.9□□□□□ -0.66
DEPDC1B-203ENST00000505017 KRT76Q01546 638 aa10.9□□□□□ -0.66
DEPDC1B-203ENST00000505017 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
DEPDC1B-203ENST00000505017 CCDC155Q8N6L0 562 aa10.89□□□□□ -0.67
DEPDC1B-203ENST00000505017 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
DEPDC1B-203ENST00000505017 IRF5Q13568 498 aa10.88□□□□□ -0.67
DEPDC1B-203ENST00000505017 POLMQ9NP87 494 aaPredicted RBP10.88□□□□□ -0.67
DEPDC1B-203ENST00000505017 ZSCAN1Q8NBB4 408 aa10.87□□□□□ -0.67
DEPDC1B-203ENST00000505017 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
DEPDC1B-203ENST00000505017 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
DEPDC1B-203ENST00000505017 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1B-203ENST00000505017 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1B-203ENST00000505017 OSBPL3Q9H4L5 887 aa10.83□□□□□ -0.68
DEPDC1B-203ENST00000505017 CEP126Q9P2H0 1117 aa10.83□□□□□ -0.68
DEPDC1B-203ENST00000505017 A0A1W2PRU2 124 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 ATP5J2-PTCD1G3V325 749 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 TRAK2O60296 914 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms