RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
TPM3-218ENST00000505010 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
TPM3-218ENST00000505010 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
TPM3-218ENST00000505010 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
TPM3-218ENST00000505010 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
TPM3-218ENST00000505010 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
TPM3-218ENST00000505010 TRIM37O94972 964 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 APBA3O96018 575 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
TPM3-218ENST00000505010 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
TPM3-218ENST00000505010 USP54Q70EL1 1684 aa12.6□□□□□ -0.39
TPM3-218ENST00000505010 FYB1O15117 783 aa12.59□□□□□ -0.39
TPM3-218ENST00000505010 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
TPM3-218ENST00000505010 NME9Q86XW9 330 aa12.59□□□□□ -0.39
TPM3-218ENST00000505010 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
TPM3-218ENST00000505010 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
TPM3-218ENST00000505010 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
TPM3-218ENST00000505010 UTRNP46939 3433 aa12.58□□□□□ -0.4
TPM3-218ENST00000505010 SSH2Q76I76 1423 aa12.58□□□□□ -0.4
TPM3-218ENST00000505010 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
TPM3-218ENST00000505010 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
TPM3-218ENST00000505010 KCNQ2O43526 872 aa12.56□□□□□ -0.4
TPM3-218ENST00000505010 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
TPM3-218ENST00000505010 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
TPM3-218ENST00000505010 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
TPM3-218ENST00000505010 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
TPM3-218ENST00000505010 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
TPM3-218ENST00000505010 COG3Q96JB2 828 aa12.55□□□□□ -0.4
TPM3-218ENST00000505010 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
TPM3-218ENST00000505010 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
TPM3-218ENST00000505010 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
TPM3-218ENST00000505010 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
TPM3-218ENST00000505010 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
TPM3-218ENST00000505010 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
TPM3-218ENST00000505010 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
TPM3-218ENST00000505010 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
TPM3-218ENST00000505010 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
TPM3-218ENST00000505010 LTN1O94822 1766 aa12.53□□□□□ -0.4
TPM3-218ENST00000505010 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
TPM3-218ENST00000505010 MTHFSP49914 203 aa12.51□□□□□ -0.41
TPM3-218ENST00000505010 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
TPM3-218ENST00000505010 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
TPM3-218ENST00000505010 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
TPM3-218ENST00000505010 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
TPM3-218ENST00000505010 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
TPM3-218ENST00000505010 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
TPM3-218ENST00000505010 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
TPM3-218ENST00000505010 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
TPM3-218ENST00000505010 EVA1CP58658 441 aa12.5□□□□□ -0.41
TPM3-218ENST00000505010 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM3-218ENST00000505010 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
TPM3-218ENST00000505010 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 HNRNPUQ00839 825 aaKnown RBP eCLIP12.49□□□□□ -0.41
TPM3-218ENST00000505010 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
TPM3-218ENST00000505010 SOX12O15370 315 aa12.48□□□□□ -0.41
TPM3-218ENST00000505010 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
TPM3-218ENST00000505010 NLRP6P59044 892 aa12.48□□□□□ -0.41
TPM3-218ENST00000505010 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
TPM3-218ENST00000505010 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
TPM3-218ENST00000505010 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
TPM3-218ENST00000505010 FBLN1P23142 703 aa12.47□□□□□ -0.41
TPM3-218ENST00000505010 SLIT3O75094 1523 aa12.47□□□□□ -0.41
TPM3-218ENST00000505010 NFAT5O94916 1531 aa12.47□□□□□ -0.41
TPM3-218ENST00000505010 RREB1Q92766 1687 aa12.46□□□□□ -0.41
TPM3-218ENST00000505010 C1QTNF8P60827 252 aa12.46□□□□□ -0.41
TPM3-218ENST00000505010 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.41
TPM3-218ENST00000505010 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.41
TPM3-218ENST00000505010 POLKQ9UBT6 870 aa12.46□□□□□ -0.41
TPM3-218ENST00000505010 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
TPM3-218ENST00000505010 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
TPM3-218ENST00000505010 INSRP06213 1382 aa12.45□□□□□ -0.42
TPM3-218ENST00000505010 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
TPM3-218ENST00000505010 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
TPM3-218ENST00000505010 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
TPM3-218ENST00000505010 PLSCR1O15162 318 aa12.43□□□□□ -0.42
TPM3-218ENST00000505010 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
TPM3-218ENST00000505010 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
TPM3-218ENST00000505010 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
TPM3-218ENST00000505010 ZBTB7AO95365 584 aa12.42□□□□□ -0.42
TPM3-218ENST00000505010 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
TPM3-218ENST00000505010 FLT4P35916 1363 aa12.42□□□□□ -0.42
TPM3-218ENST00000505010 USP19O94966 1318 aa12.41□□□□□ -0.42
TPM3-218ENST00000505010 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
TPM3-218ENST00000505010 ZBED9Q6R2W3 1325 aa12.41□□□□□ -0.42
TPM3-218ENST00000505010 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
TPM3-218ENST00000505010 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
TPM3-218ENST00000505010 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
TPM3-218ENST00000505010 RGPD5Q99666 1765 aa12.41□□□□□ -0.42
TPM3-218ENST00000505010 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms