RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 EIF4A2Q14240 407 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
POLR2J3-210ENST00000504677 GCP02774 474 aa15.71■□□□□ 0.11
POLR2J3-210ENST00000504677 HOXC9P31274 260 aa15.71■□□□□ 0.11
POLR2J3-210ENST00000504677 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-210ENST00000504677 AHDC1Q5TGY3 1603 aaPredicted RBP15.7■□□□□ 0.1
POLR2J3-210ENST00000504677 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
POLR2J3-210ENST00000504677 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
POLR2J3-210ENST00000504677 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
POLR2J3-210ENST00000504677 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
POLR2J3-210ENST00000504677 IP6K1Q92551 441 aa15.69■□□□□ 0.1
POLR2J3-210ENST00000504677 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
POLR2J3-210ENST00000504677 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
POLR2J3-210ENST00000504677 KDRP35968 1356 aa15.68■□□□□ 0.1
POLR2J3-210ENST00000504677 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
POLR2J3-210ENST00000504677 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
POLR2J3-210ENST00000504677 E9PSI1 815 aa15.67■□□□□ 0.1
POLR2J3-210ENST00000504677 ARHGEF25Q86VW2 580 aa15.67■□□□□ 0.1
POLR2J3-210ENST00000504677 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
POLR2J3-210ENST00000504677 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
POLR2J3-210ENST00000504677 ABCA3Q99758 1704 aa15.66■□□□□ 0.1
POLR2J3-210ENST00000504677 HMOX1P09601 288 aa15.66■□□□□ 0.1
POLR2J3-210ENST00000504677 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-210ENST00000504677 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-210ENST00000504677 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-210ENST00000504677 CPDO75976 1380 aa15.65■□□□□ 0.1
POLR2J3-210ENST00000504677 NEFLP07196 543 aa15.65■□□□□ 0.1
POLR2J3-210ENST00000504677 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
POLR2J3-210ENST00000504677 CAMTA1Q9Y6Y1 1673 aa15.64■□□□□ 0.09
POLR2J3-210ENST00000504677 SLFN5Q08AF3 891 aa15.64■□□□□ 0.09
POLR2J3-210ENST00000504677 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
POLR2J3-210ENST00000504677 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
POLR2J3-210ENST00000504677 SULT6B1Q6IMI4 303 aa15.64■□□□□ 0.09
POLR2J3-210ENST00000504677 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
POLR2J3-210ENST00000504677 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
POLR2J3-210ENST00000504677 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
POLR2J3-210ENST00000504677 IL16Q14005 1332 aa15.63■□□□□ 0.09
POLR2J3-210ENST00000504677 COL18A1P39060 1754 aa15.62■□□□□ 0.09
POLR2J3-210ENST00000504677 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
POLR2J3-210ENST00000504677 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
POLR2J3-210ENST00000504677 EYA1Q99502 592 aa15.62■□□□□ 0.09
POLR2J3-210ENST00000504677 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
POLR2J3-210ENST00000504677 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
POLR2J3-210ENST00000504677 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
POLR2J3-210ENST00000504677 RIPK4P57078 832 aa15.61■□□□□ 0.09
POLR2J3-210ENST00000504677 DUSP27Q5VZP5 1158 aa15.61■□□□□ 0.09
POLR2J3-210ENST00000504677 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 TOM1O60784 492 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 PLEKHG2Q9H7P9 1386 aa15.6■□□□□ 0.09
POLR2J3-210ENST00000504677 LRRC59Q96AG4 307 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-210ENST00000504677 PHACTR3Q96KR7 559 aa15.59■□□□□ 0.09
POLR2J3-210ENST00000504677 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
POLR2J3-210ENST00000504677 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-210ENST00000504677 PHLPP1O60346 1717 aa15.59■□□□□ 0.09
POLR2J3-210ENST00000504677 RGPD5Q99666 1765 aa15.58■□□□□ 0.08
POLR2J3-210ENST00000504677 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.08
POLR2J3-210ENST00000504677 LTV1Q96GA3 475 aaPredicted RBP15.58■□□□□ 0.08
POLR2J3-210ENST00000504677 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
POLR2J3-210ENST00000504677 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 ZC3H6P61129 1189 aaKnown RBP15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 ANKRD24Q8TF21 1146 aa15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 ERBB3P21860 1342 aa15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 KIAA0232Q92628 1395 aa15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 RGPD2P0DJD1 1756 aa15.57■□□□□ 0.08
POLR2J3-210ENST00000504677 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
POLR2J3-210ENST00000504677 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
POLR2J3-210ENST00000504677 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
POLR2J3-210ENST00000504677 CT47B1P0C2W7 299 aaPredicted RBP15.54■□□□□ 0.08
POLR2J3-210ENST00000504677 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
POLR2J3-210ENST00000504677 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
POLR2J3-210ENST00000504677 NBPF6Q5VWK0 638 aa15.53■□□□□ 0.08
POLR2J3-210ENST00000504677 NBPF4Q96M43 638 aa15.53■□□□□ 0.08
POLR2J3-210ENST00000504677 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
POLR2J3-210ENST00000504677 LRRC37A3O60309 1634 aa15.53■□□□□ 0.08
POLR2J3-210ENST00000504677 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.08
POLR2J3-210ENST00000504677 IFT57Q9NWB7 429 aa15.52■□□□□ 0.08
POLR2J3-210ENST00000504677 AXIN2Q9Y2T1 843 aa15.52■□□□□ 0.08
POLR2J3-210ENST00000504677 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
POLR2J3-210ENST00000504677 GNAI1P63096 354 aa15.51■□□□□ 0.07
POLR2J3-210ENST00000504677 MTHFSDQ2M296 383 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-210ENST00000504677 AMOTQ4VCS5 1084 aa15.51■□□□□ 0.07
POLR2J3-210ENST00000504677 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-210ENST00000504677 MAP3K5Q99683 1374 aa15.5■□□□□ 0.07
POLR2J3-210ENST00000504677 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
POLR2J3-210ENST00000504677 RRP1P56182 461 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-210ENST00000504677 FKBP8Q14318 412 aa15.5■□□□□ 0.07
POLR2J3-210ENST00000504677 COL5A2P05997 1499 aaPredicted RBP15.5■□□□□ 0.07
POLR2J3-210ENST00000504677 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
POLR2J3-210ENST00000504677 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
POLR2J3-210ENST00000504677 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.49■□□□□ 0.07
POLR2J3-210ENST00000504677 PARP4Q9UKK3 1724 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms