RNA–Protein interactions for RNA: ENST00000504571.5

ATP2C1-206, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-206ENST00000504571 NISCHQ9Y2I1 1504 aa6.3□□□□□ -1.4
ATP2C1-206ENST00000504571 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
ATP2C1-206ENST00000504571 DZIP3Q86Y13 1208 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-206ENST00000504571 C1QTNF2Q9BXJ5 285 aa6.29□□□□□ -1.4
ATP2C1-206ENST00000504571 ST8SIA5O15466 376 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 VARSP26640 1264 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 TRMT44Q8IYL2 757 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 SLC10A4Q96EP9 437 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 CDV3Q9UKY7 258 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-206ENST00000504571 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
ATP2C1-206ENST00000504571 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
ATP2C1-206ENST00000504571 UCN2Q96RP3 112 aa6.27□□□□□ -1.41
ATP2C1-206ENST00000504571 PALM3A6NDB9 673 aaPredicted RBP6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 SKOR1P84550 965 aa6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 NBPF20Q3BBV1 942 aa6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 SLFNL1Q499Z3 407 aa6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 ZNF775Q96BV0 537 aaPredicted RBP6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 AAASQ9NRG9 546 aa6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 TOR4AQ9NXH8 423 aa6.26□□□□□ -1.41
ATP2C1-206ENST00000504571 ATP9BO43861 1147 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 PPP1R15AO75807 674 aaPredicted RBP6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 CFAP70Q5T0N1 1121 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 RC3H1Q5TC82 1133 aaKnown RBP6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 CCDC125Q86Z20 511 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 EHBP1Q8NDI1 1231 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 PODXL2Q9NZ53 605 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 TFIP11Q9UBB9 837 aaKnown RBP6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 DACH1Q9UI36 760 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 MAP4K5Q9Y4K4 846 aa6.25□□□□□ -1.41
ATP2C1-206ENST00000504571 TBC1D9Q6ZT07 1266 aa6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 RNF135Q8IUD6 432 aa6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 CYP4X1Q8N118 509 aa6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 PHTF2Q8N3S3 785 aa6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 MPNDQ8N594 471 aa6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 MAFBQ9Y5Q3 323 aaPredicted RBP6.24□□□□□ -1.41
ATP2C1-206ENST00000504571 PIK3CDO00329 1044 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 WNT7AO00755 349 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 LZTS3O60299 673 aaPredicted RBP6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 SKIP12755 728 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 PDIA4P13667 645 aaKnown RBP6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 LMOD1P29536 600 aaPredicted RBP6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 MAP7D1Q3KQU3 841 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 TRAIPQ9BWF2 469 aa6.23□□□□□ -1.41
ATP2C1-206ENST00000504571 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 ESPNB1AK53 854 aa6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 VASH1Q7L8A9 365 aaPredicted RBP6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 PLEKHM2Q8IWE5 1019 aa6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 PBXIP1Q96AQ6 731 aa6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 KCTD15Q96SI1 283 aaPredicted RBP6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 CHIC2Q9UKJ5 165 aa6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 ACIN1Q9UKV3 1341 aaKnown RBP6.22□□□□□ -1.41
ATP2C1-206ENST00000504571 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 GIGYF1O75420 1035 aaPredicted RBP6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 RFX1P22670 979 aa6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 PLPP7Q8NBV4 271 aa6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 TRIM52Q96A61 297 aa6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 MRGPRX2Q96LB1 330 aa6.21□□□□□ -1.42
ATP2C1-206ENST00000504571 USP17L3A6NCW0 530 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 USP17L4A6NCW7 530 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 J3QL48 77 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 SIAH2O43255 324 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 AVPP01185 164 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 SMPD1P17405 629 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 USP17L2Q6R6M4 530 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 USP17L1Q7RTZ2 530 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 DOLKQ9UPQ8 538 aa6.2□□□□□ -1.42
ATP2C1-206ENST00000504571 AXIN1O15169 862 aa6.19□□□□□ -1.42
ATP2C1-206ENST00000504571 ARID5BQ14865 1188 aa6.19□□□□□ -1.42
ATP2C1-206ENST00000504571 SNIP1Q8TAD8 396 aaKnown RBP6.19□□□□□ -1.42
ATP2C1-206ENST00000504571 CCDC85AQ96PX6 553 aaPredicted RBP6.19□□□□□ -1.42
ATP2C1-206ENST00000504571 VRTNQ9H8Y1 702 aa6.19□□□□□ -1.42
ATP2C1-206ENST00000504571 ADH1CP00326 375 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 DHX9Q08211 1270 aaKnown RBP6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 NR5A1Q13285 461 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 EML3Q32P44 896 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 INTS6LQ5JSJ4 861 aaKnown RBP6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 SIRT1Q96EB6 747 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 GMPR2Q9P2T1 348 aaKnown RBP6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 TLL2Q9Y6L7 1015 aa6.18□□□□□ -1.42
ATP2C1-206ENST00000504571 CARNS1A5YM72 827 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 ATP5J2-PTCD1G3V325 749 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 ATG7O95352 703 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 FSHRP23945 695 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 GRM5P41594 1212 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 NCOA4Q13772 614 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 KANK4Q5T7N3 995 aaPredicted RBP6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 DEPDC4Q8N2C3 294 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 NOD1Q9Y239 953 aa6.17□□□□□ -1.42
ATP2C1-206ENST00000504571 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms