RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PLCH2O75038 1416 aa12.01□□□□□ -0.49
CASC9-201ENST00000504531 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
CASC9-201ENST00000504531 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
CASC9-201ENST00000504531 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
CASC9-201ENST00000504531 AMHR2Q16671 573 aa12□□□□□ -0.49
CASC9-201ENST00000504531 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
CASC9-201ENST00000504531 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
CASC9-201ENST00000504531 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
CASC9-201ENST00000504531 RTEL1-TNFRSF6BF6WH68 1400 aa12□□□□□ -0.49
CASC9-201ENST00000504531 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
CASC9-201ENST00000504531 NLRP7Q8WX94 980 aa11.99□□□□□ -0.49
CASC9-201ENST00000504531 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
CASC9-201ENST00000504531 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
CASC9-201ENST00000504531 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
CASC9-201ENST00000504531 WDR7Q9Y4E6 1490 aa11.98□□□□□ -0.49
CASC9-201ENST00000504531 WASHC2CQ9Y4E1 1318 aa11.98□□□□□ -0.49
CASC9-201ENST00000504531 INSRP06213 1382 aa11.97□□□□□ -0.49
CASC9-201ENST00000504531 TRIM66O15016 1216 aa11.97□□□□□ -0.49
CASC9-201ENST00000504531 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
CASC9-201ENST00000504531 KMT5BQ4FZB7 885 aa11.97□□□□□ -0.49
CASC9-201ENST00000504531 ARHGAP5Q13017 1502 aa11.96□□□□□ -0.49
CASC9-201ENST00000504531 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
CASC9-201ENST00000504531 RAPGEF3O95398 923 aa11.96□□□□□ -0.49
CASC9-201ENST00000504531 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
CASC9-201ENST00000504531 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.49
CASC9-201ENST00000504531 RDH13Q8NBN7 331 aa11.96□□□□□ -0.49
CASC9-201ENST00000504531 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
CASC9-201ENST00000504531 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.5
CASC9-201ENST00000504531 BCORL1Q5H9F3 1711 aa11.95□□□□□ -0.5
CASC9-201ENST00000504531 SLC10A3P09131 477 aa11.95□□□□□ -0.5
CASC9-201ENST00000504531 EIF2AK4Q9P2K8 1649 aaKnown RBP11.95□□□□□ -0.5
CASC9-201ENST00000504531 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
CASC9-201ENST00000504531 CCDC144AA2RUR9 1427 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 CFHP08603 1231 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
CASC9-201ENST00000504531 RALBP1Q15311 655 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
CASC9-201ENST00000504531 ZCCHC11Q5TAX3 1644 aaKnown RBP11.93□□□□□ -0.5
CASC9-201ENST00000504531 APLP1P51693 650 aa11.93□□□□□ -0.5
CASC9-201ENST00000504531 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
CASC9-201ENST00000504531 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
CASC9-201ENST00000504531 MRS2Q9HD23 443 aa11.93□□□□□ -0.5
CASC9-201ENST00000504531 TRPM1Q7Z4N2 1603 aa11.93□□□□□ -0.5
CASC9-201ENST00000504531 ABCC1P33527 1531 aa11.92□□□□□ -0.5
CASC9-201ENST00000504531 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
CASC9-201ENST00000504531 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
CASC9-201ENST00000504531 E9PCH4 1651 aa11.91□□□□□ -0.5
CASC9-201ENST00000504531 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
CASC9-201ENST00000504531 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
CASC9-201ENST00000504531 CD46P15529 392 aa11.9□□□□□ -0.5
CASC9-201ENST00000504531 HSPA2P54652 639 aa11.9□□□□□ -0.5
CASC9-201ENST00000504531 PDE4DQ08499 809 aa11.9□□□□□ -0.5
CASC9-201ENST00000504531 SMG6Q86US8 1419 aaKnown RBP11.9□□□□□ -0.5
CASC9-201ENST00000504531 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
CASC9-201ENST00000504531 PRDM15P57071 1507 aaPredicted RBP11.89□□□□□ -0.51
CASC9-201ENST00000504531 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
CASC9-201ENST00000504531 GCGRP47871 477 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
CASC9-201ENST00000504531 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 PPP4R2Q9NY27 417 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 PLA2G2EQ9NZK7 142 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 PCDHB3Q9Y5E6 796 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 LRPPRCP42704 1394 aaKnown RBP11.88□□□□□ -0.51
CASC9-201ENST00000504531 PTPRMP28827 1452 aa11.88□□□□□ -0.51
CASC9-201ENST00000504531 PTPRTO14522 1441 aa11.87□□□□□ -0.51
CASC9-201ENST00000504531 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
CASC9-201ENST00000504531 MLECQ14165 292 aa11.87□□□□□ -0.51
CASC9-201ENST00000504531 DCAF11Q8TEB1 546 aa11.87□□□□□ -0.51
CASC9-201ENST00000504531 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
CASC9-201ENST00000504531 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
CASC9-201ENST00000504531 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
CASC9-201ENST00000504531 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
CASC9-201ENST00000504531 A2MP01023 1474 aa11.86□□□□□ -0.51
CASC9-201ENST00000504531 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
CASC9-201ENST00000504531 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 KCNC4Q03721 635 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 MTRQ99707 1265 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
CASC9-201ENST00000504531 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
CASC9-201ENST00000504531 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
CASC9-201ENST00000504531 TRPM2O94759 1503 aa11.84□□□□□ -0.51
CASC9-201ENST00000504531 PARD3Q8TEW0 1356 aa11.83□□□□□ -0.52
CASC9-201ENST00000504531 PDE3BQ13370 1112 aa11.83□□□□□ -0.52
CASC9-201ENST00000504531 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
CASC9-201ENST00000504531 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
CASC9-201ENST00000504531 ZFYVE16Q7Z3T8 1539 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 TET3O43151 1660 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 FAM9BQ8IZU0 186 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
CASC9-201ENST00000504531 DISP3Q9P2K9 1392 aa11.81□□□□□ -0.52
CASC9-201ENST00000504531 INO80Q9ULG1 1556 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms