RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 FAM135BQ49AJ0 1406 aa8.61□□□□□ -1.03
KLHL3-205ENST00000504496 NSD2O96028 1365 aa8.61□□□□□ -1.03
KLHL3-205ENST00000504496 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
KLHL3-205ENST00000504496 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
KLHL3-205ENST00000504496 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
KLHL3-205ENST00000504496 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 ITPRIPQ8IWB1 547 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 PRAM1Q96QH2 718 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 STK26Q9P289 416 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 ANKRD26Q9UPS8 1709 aa8.6□□□□□ -1.03
KLHL3-205ENST00000504496 EXOSC9Q06265 439 aaKnown RBP8.59□□□□□ -1.03
KLHL3-205ENST00000504496 SAFB2Q14151 953 aaKnown RBP eCLIP8.59□□□□□ -1.03
KLHL3-205ENST00000504496 C22orf23Q9BZE7 217 aa8.59□□□□□ -1.03
KLHL3-205ENST00000504496 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
KLHL3-205ENST00000504496 EIF5BO60841 1220 aaKnown RBP8.59□□□□□ -1.03
KLHL3-205ENST00000504496 SIRT1Q96EB6 747 aa8.59□□□□□ -1.03
KLHL3-205ENST00000504496 CHD2O14647 1828 aaKnown RBP8.58□□□□□ -1.04
KLHL3-205ENST00000504496 POTEMA6NI47 508 aa8.58□□□□□ -1.04
KLHL3-205ENST00000504496 CT47B1P0C2W7 299 aaPredicted RBP8.58□□□□□ -1.04
KLHL3-205ENST00000504496 DDX19BQ9UMR2 479 aa8.58□□□□□ -1.04
KLHL3-205ENST00000504496 ATAD2Q6PL18 1390 aa8.58□□□□□ -1.04
KLHL3-205ENST00000504496 PIK3R4Q99570 1358 aa8.58□□□□□ -1.04
KLHL3-205ENST00000504496 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.58□□□□□ -1.04
KLHL3-205ENST00000504496 PTPRUQ92729 1446 aa8.58□□□□□ -1.04
KLHL3-205ENST00000504496 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
KLHL3-205ENST00000504496 HSCBQ8IWL3 235 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 CHMP5Q9NZZ3 219 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 NOB1Q9ULX3 412 aaKnown RBP8.57□□□□□ -1.04
KLHL3-205ENST00000504496 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 GOLGA6L3A6NEY3 463 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 TRIM27P14373 513 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 MCM4P33991 863 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 TMPOP42166 694 aaKnown RBP8.57□□□□□ -1.04
KLHL3-205ENST00000504496 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
KLHL3-205ENST00000504496 ATF7IPQ6VMQ6 1270 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 SSH1Q8WYL5 1049 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 GZF1Q9H116 711 aaPredicted RBP8.57□□□□□ -1.04
KLHL3-205ENST00000504496 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
KLHL3-205ENST00000504496 MINK1Q8N4C8 1332 aaPredicted RBP8.56□□□□□ -1.04
KLHL3-205ENST00000504496 A0A1W2PP64 1363 aa8.56□□□□□ -1.04
KLHL3-205ENST00000504496 ROBO2Q9HCK4 1378 aa8.56□□□□□ -1.04
KLHL3-205ENST00000504496 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
KLHL3-205ENST00000504496 RIPK4P57078 832 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 NWD1Q149M9 1564 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 ITSN1Q15811 1721 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 AKAP12Q02952 1782 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 MON2Q7Z3U7 1717 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 ATP7BP35670 1465 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
KLHL3-205ENST00000504496 KIF16BQ96L93 1317 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 WAPLQ7Z5K2 1190 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 ANKLE2Q86XL3 938 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 PLEKHF1Q96S99 279 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
KLHL3-205ENST00000504496 IL16Q14005 1332 aa8.54□□□□□ -1.04
KLHL3-205ENST00000504496 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
KLHL3-205ENST00000504496 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 TRAK2O60296 914 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 SMC5Q8IY18 1101 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 PNNQ9H307 717 aaKnown RBP8.53□□□□□ -1.04
KLHL3-205ENST00000504496 RRAGDQ9NQL2 400 aaPredicted RBP8.53□□□□□ -1.04
KLHL3-205ENST00000504496 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
KLHL3-205ENST00000504496 DIAPH1O60610 1272 aaKnown RBP8.52□□□□□ -1.04
KLHL3-205ENST00000504496 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.04
KLHL3-205ENST00000504496 CDK19Q9BWU1 502 aa8.52□□□□□ -1.04
KLHL3-205ENST00000504496 LNPKQ9C0E8 428 aa8.52□□□□□ -1.04
KLHL3-205ENST00000504496 LRRC7Q96NW7 1537 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 FMN2Q9NZ56 1722 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
KLHL3-205ENST00000504496 XRCC6P12956 609 aaKnown RBP eCLIP8.52□□□□□ -1.05
KLHL3-205ENST00000504496 HDGFL2Q7Z4V5 671 aaPredicted RBP8.52□□□□□ -1.05
KLHL3-205ENST00000504496 ZNF692Q9BU19 519 aaPredicted RBP8.52□□□□□ -1.05
KLHL3-205ENST00000504496 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 AMOTL2Q9Y2J4 779 aa8.52□□□□□ -1.05
KLHL3-205ENST00000504496 NUCB1Q02818 461 aa8.51□□□□□ -1.05
KLHL3-205ENST00000504496 ZBTB40Q9NUA8 1239 aa8.51□□□□□ -1.05
KLHL3-205ENST00000504496 LMTK3Q96Q04 1460 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 FYB1O15117 783 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 ALDH1L2Q3SY69 923 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 CHD1LQ86WJ1 897 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 PANK2Q9BZ23 570 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
KLHL3-205ENST00000504496 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
KLHL3-205ENST00000504496 KDM4FA0A1W2PPD8 638 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms