RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 METTL16Q86W50 562 aaKnown RBP7.09□□□□□ -1.27
NIPBL-204ENST00000504430 GLYCTKQ8IVS8 523 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 CREB3O43889 395 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 VAMP1P23763 118 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 MORC4Q8TE76 937 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 ZBTB3Q9H5J0 574 aa7.09□□□□□ -1.27
NIPBL-204ENST00000504430 ECM1Q16610 540 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
NIPBL-204ENST00000504430 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
NIPBL-204ENST00000504430 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 SOCS7O14512 581 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 FDX1P10109 184 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 FAM200AQ8TCP9 573 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
NIPBL-204ENST00000504430 MRPL58Q14197 206 aaKnown RBP7.07□□□□□ -1.28
NIPBL-204ENST00000504430 STAG1Q8WVM7 1258 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 KCNB2Q92953 911 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 KCNG1Q9UIX4 513 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 TSGA10IPQ3SY00 556 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 IGBP1P78318 339 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
NIPBL-204ENST00000504430 RDH13Q8NBN7 331 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 KIAA1024Q9UPX6 916 aa7.07□□□□□ -1.28
NIPBL-204ENST00000504430 SMAPO00193 183 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 CLDN10P78369 228 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 PPP1R18Q6NYC8 613 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
NIPBL-204ENST00000504430 PURBQ96QR8 312 aaKnown RBP7.06□□□□□ -1.28
NIPBL-204ENST00000504430 BOLA1Q9Y3E2 137 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 PTMSP20962 102 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 ARHGAP4P98171 946 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
NIPBL-204ENST00000504430 CLP1Q92989 425 aaKnown RBP7.06□□□□□ -1.28
NIPBL-204ENST00000504430 FAM196BA6NMK8 535 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 SCAMP3O14828 347 aaKnown RBP7.06□□□□□ -1.28
NIPBL-204ENST00000504430 ATP2B1P20020 1258 aa7.06□□□□□ -1.28
NIPBL-204ENST00000504430 PHF14O94880 888 aa7.05□□□□□ -1.28
NIPBL-204ENST00000504430 DNMT3AQ9Y6K1 912 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-204ENST00000504430 WWC3Q9ULE0 1092 aa7.05□□□□□ -1.28
NIPBL-204ENST00000504430 HOXA2O43364 376 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 TUSC1Q2TAM9 212 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 C6orf132Q5T0Z8 1188 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
NIPBL-204ENST00000504430 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
NIPBL-204ENST00000504430 ASB16Q96NS5 453 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 ZFYVE27Q5T4F4 411 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 CDCA7LQ96GN5 454 aa7.04□□□□□ -1.28
NIPBL-204ENST00000504430 ZNF394Q53GI3 561 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 RBM42Q9BTD8 480 aaKnown RBP7.03□□□□□ -1.28
NIPBL-204ENST00000504430 C6orf229H3BNL8 230 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 FANCCQ00597 558 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 NAA30Q147X3 362 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-204ENST00000504430 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-204ENST00000504430 KIF4AO95239 1232 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 SMC5Q8IY18 1101 aa7.03□□□□□ -1.28
NIPBL-204ENST00000504430 ANO8Q9HCE9 1232 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-204ENST00000504430 ICMTO60725 284 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
NIPBL-204ENST00000504430 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
NIPBL-204ENST00000504430 SH3BP5O60239 455 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 OCLNQ16625 522 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
NIPBL-204ENST00000504430 MAPK8P45983 427 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 MTMR2Q13614 643 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 CCDC146Q8IYE0 955 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
NIPBL-204ENST00000504430 APLP1P51693 650 aa7.01□□□□□ -1.29
NIPBL-204ENST00000504430 LARP1Q6PKG0 1096 aaKnown RBP7.01□□□□□ -1.29
NIPBL-204ENST00000504430 METTL14Q9HCE5 456 aaKnown RBP7.01□□□□□ -1.29
NIPBL-204ENST00000504430 EVA1CP58658 441 aa7.01□□□□□ -1.29
NIPBL-204ENST00000504430 PRPF38BQ5VTL8 546 aaKnown RBP7.01□□□□□ -1.29
NIPBL-204ENST00000504430 CCSER2Q9H7U1 834 aa7.01□□□□□ -1.29
NIPBL-204ENST00000504430 TMC7Q7Z402 723 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 C11orf96Q7Z7L8 435 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 TTC13Q8NBP0 860 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 PLEKHG6Q3KR16 790 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 NUDT18Q6ZVK8 323 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 PARP2Q9UGN5 583 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 SOX11P35716 441 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 GRIPAP1Q4V328 841 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
NIPBL-204ENST00000504430 DUSP9Q99956 384 aaKnown RBP7□□□□□ -1.29
NIPBL-204ENST00000504430 IRF2BPLQ9H1B7 796 aa7□□□□□ -1.29
NIPBL-204ENST00000504430 MAMSTRQ6ZN01 415 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 EPAS1Q99814 870 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 COL4A3BPQ9Y5P4 624 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
NIPBL-204ENST00000504430 TBX4P57082 545 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 LONRF3Q496Y0 759 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 EYA1Q99502 592 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 NOP58Q9Y2X3 529 aaKnown RBP6.99□□□□□ -1.29
NIPBL-204ENST00000504430 CBLBQ13191 982 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 TYW1BQ6NUM6 668 aa6.99□□□□□ -1.29
NIPBL-204ENST00000504430 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 C21orf2O43822 256 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 FMNL3Q8IVF7 1028 aa6.98□□□□□ -1.29
NIPBL-204ENST00000504430 SLF2Q8IX21 1173 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms