RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MED14O60244 1454 aa21.97■■□□□ 1.11
POLR2J3-209ENST00000504157 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
POLR2J3-209ENST00000504157 TMEM57Q8N5G2 664 aa21.97■■□□□ 1.11
POLR2J3-209ENST00000504157 KIF1BO60333 1816 aa21.97■■□□□ 1.11
POLR2J3-209ENST00000504157 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
POLR2J3-209ENST00000504157 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
POLR2J3-209ENST00000504157 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
POLR2J3-209ENST00000504157 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
POLR2J3-209ENST00000504157 CBX1P83916 185 aa21.95■■□□□ 1.1
POLR2J3-209ENST00000504157 KIAA2012Q0VF49 1180 aa21.95■■□□□ 1.1
POLR2J3-209ENST00000504157 MCTP1Q6DN14 999 aa21.95■■□□□ 1.1
POLR2J3-209ENST00000504157 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 HMGN5P82970 282 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 TAF3Q5VWG9 929 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 POGZQ7Z3K3 1410 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 ALDH1L2Q3SY69 923 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 GCC1Q96CN9 775 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 LNPKQ9C0E8 428 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
POLR2J3-209ENST00000504157 CYP2E1P05181 493 aaPredicted RBP21.93■■□□□ 1.1
POLR2J3-209ENST00000504157 BRPF1P55201 1214 aaPredicted RBP21.93■■□□□ 1.1
POLR2J3-209ENST00000504157 NUCB2P80303 420 aa21.93■■□□□ 1.1
POLR2J3-209ENST00000504157 TMEM51Q9NW97 253 aa21.93■■□□□ 1.1
POLR2J3-209ENST00000504157 BCL11BQ9C0K0 894 aaPredicted RBP21.92■■□□□ 1.1
POLR2J3-209ENST00000504157 NAP1L2Q9ULW6 460 aaPredicted RBP21.92■■□□□ 1.1
POLR2J3-209ENST00000504157 LRSAM1Q6UWE0 723 aa21.92■■□□□ 1.1
POLR2J3-209ENST00000504157 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
POLR2J3-209ENST00000504157 TMPOP42166 694 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 CHMP4BQ9H444 224 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 ANKRD36BQ8N2N9 1353 aa21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 ATP2B3Q16720 1220 aa21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 TBC1D9Q6ZT07 1266 aa21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 MROH2AA6NES4 1674 aa21.91■■□□□ 1.1
POLR2J3-209ENST00000504157 ADGRB1O14514 1584 aa21.9■■□□□ 1.1
POLR2J3-209ENST00000504157 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
POLR2J3-209ENST00000504157 UGGT1Q9NYU2 1555 aa21.9■■□□□ 1.1
POLR2J3-209ENST00000504157 ZNF428Q96B54 188 aa21.9■■□□□ 1.1
POLR2J3-209ENST00000504157 CFAP44Q96MT7 982 aa21.9■■□□□ 1.1
POLR2J3-209ENST00000504157 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.1
POLR2J3-209ENST00000504157 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.1
POLR2J3-209ENST00000504157 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.1
POLR2J3-209ENST00000504157 PIK3R4Q99570 1358 aa21.89■■□□□ 1.09
POLR2J3-209ENST00000504157 PDIA4P13667 645 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-209ENST00000504157 GPT2Q8TD30 523 aa21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 RABEP1Q15276 862 aa21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
POLR2J3-209ENST00000504157 IPO4Q8TEX9 1081 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-209ENST00000504157 CDC45O75419 566 aa21.86■■□□□ 1.09
POLR2J3-209ENST00000504157 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-209ENST00000504157 ATP7AQ04656 1500 aa21.85■■□□□ 1.09
POLR2J3-209ENST00000504157 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
POLR2J3-209ENST00000504157 DNTTIP2Q5QJE6 756 aaKnown RBP21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 TSC1Q92574 1164 aa21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 C14orf93Q9H972 538 aaKnown RBP21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 RBM27Q9P2N5 1060 aaKnown RBP21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 KIF3AQ9Y496 699 aa21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 LMTK2Q8IWU2 1503 aa21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 PIBF1Q8WXW3 757 aa21.84■■□□□ 1.09
POLR2J3-209ENST00000504157 CWC22Q9HCG8 908 aaKnown RBP21.83■■□□□ 1.09
POLR2J3-209ENST00000504157 TMEM63CQ9P1W3 806 aa21.83■■□□□ 1.09
POLR2J3-209ENST00000504157 AK9Q5TCS8 1911 aa21.83■■□□□ 1.08
POLR2J3-209ENST00000504157 ANKRD45Q5TZF3 282 aa21.83■■□□□ 1.08
POLR2J3-209ENST00000504157 PTCH1Q13635 1447 aa21.83■■□□□ 1.08
POLR2J3-209ENST00000504157 ZBTB7BO15156 539 aaPredicted RBP21.82■■□□□ 1.08
POLR2J3-209ENST00000504157 PRPF40AO75400 957 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-209ENST00000504157 PTMAP06454 111 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-209ENST00000504157 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
POLR2J3-209ENST00000504157 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
POLR2J3-209ENST00000504157 MLH3Q9UHC1 1453 aa21.81■■□□□ 1.08
POLR2J3-209ENST00000504157 SYCE3A1L190 88 aa21.81■■□□□ 1.08
POLR2J3-209ENST00000504157 HECW2Q9P2P5 1572 aa21.81■■□□□ 1.08
POLR2J3-209ENST00000504157 PPLO60437 1756 aa21.8■■□□□ 1.08
POLR2J3-209ENST00000504157 TULP4Q9NRJ4 1543 aa21.8■■□□□ 1.08
POLR2J3-209ENST00000504157 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
POLR2J3-209ENST00000504157 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
POLR2J3-209ENST00000504157 PDCL2Q8N4E4 241 aa21.79■■□□□ 1.08
POLR2J3-209ENST00000504157 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
POLR2J3-209ENST00000504157 SPTLC3Q9NUV7 552 aa21.78■■□□□ 1.08
POLR2J3-209ENST00000504157 EVC2Q86UK5 1308 aa21.78■■□□□ 1.08
POLR2J3-209ENST00000504157 YEATS2Q9ULM3 1422 aa21.78■■□□□ 1.08
POLR2J3-209ENST00000504157 PKP1Q13835 747 aa21.77■■□□□ 1.08
POLR2J3-209ENST00000504157 CDC42BPGQ6DT37 1551 aa21.77■■□□□ 1.07
POLR2J3-209ENST00000504157 FKBP5Q13451 457 aaPredicted RBP21.76■■□□□ 1.07
POLR2J3-209ENST00000504157 MBD3O95983 291 aa21.76■■□□□ 1.07
POLR2J3-209ENST00000504157 KIF3BO15066 747 aa21.75■■□□□ 1.07
POLR2J3-209ENST00000504157 SPDYE4A6NLX3 237 aa21.75■■□□□ 1.07
POLR2J3-209ENST00000504157 RNF214Q8ND24 703 aa21.75■■□□□ 1.07
POLR2J3-209ENST00000504157 ANKRD7Q92527 254 aa21.75■■□□□ 1.07
POLR2J3-209ENST00000504157 FEZ1Q99689 392 aa21.75■■□□□ 1.07
POLR2J3-209ENST00000504157 ANKRD26Q9UPS8 1709 aa21.74■■□□□ 1.07
POLR2J3-209ENST00000504157 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
POLR2J3-209ENST00000504157 ABCC4O15439 1325 aa21.74■■□□□ 1.07
POLR2J3-209ENST00000504157 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
POLR2J3-209ENST00000504157 SIRT2Q8IXJ6 389 aa21.74■■□□□ 1.07
POLR2J3-209ENST00000504157 TSPY26PQ9H489 355 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms