RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
KDM3B-202ENST00000504095 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
KDM3B-202ENST00000504095 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
KDM3B-202ENST00000504095 TECPR2O15040 1411 aa12.09□□□□□ -0.47
KDM3B-202ENST00000504095 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
KDM3B-202ENST00000504095 YTHDC2Q9H6S0 1430 aaKnown RBP12.09□□□□□ -0.47
KDM3B-202ENST00000504095 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
KDM3B-202ENST00000504095 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
KDM3B-202ENST00000504095 ABCC11Q96J66 1382 aa12.07□□□□□ -0.48
KDM3B-202ENST00000504095 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
KDM3B-202ENST00000504095 ARHGEF28Q8N1W1 1705 aaKnown RBP12.07□□□□□ -0.48
KDM3B-202ENST00000504095 STK26Q9P289 416 aa12.07□□□□□ -0.48
KDM3B-202ENST00000504095 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.07□□□□□ -0.48
KDM3B-202ENST00000504095 NCOA3Q9Y6Q9 1424 aa12.06□□□□□ -0.48
KDM3B-202ENST00000504095 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
KDM3B-202ENST00000504095 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
KDM3B-202ENST00000504095 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
KDM3B-202ENST00000504095 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
KDM3B-202ENST00000504095 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 MSH6P52701 1360 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
KDM3B-202ENST00000504095 RALGAPBQ86X10 1494 aa12.02□□□□□ -0.48
KDM3B-202ENST00000504095 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
KDM3B-202ENST00000504095 EVI5O60447 810 aa12.02□□□□□ -0.49
KDM3B-202ENST00000504095 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
KDM3B-202ENST00000504095 ROCK2O75116 1388 aaKnown RBP12.02□□□□□ -0.49
KDM3B-202ENST00000504095 TK2O00142 265 aa12.01□□□□□ -0.49
KDM3B-202ENST00000504095 MFSD10Q14728 455 aa12.01□□□□□ -0.49
KDM3B-202ENST00000504095 FBXO41Q8TF61 875 aa12.01□□□□□ -0.49
KDM3B-202ENST00000504095 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
KDM3B-202ENST00000504095 TOM1O60784 492 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 MAP3K9P80192 1104 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 PRAM1Q96QH2 718 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 DCCP43146 1447 aa12□□□□□ -0.49
KDM3B-202ENST00000504095 HRO43593 1189 aa11.99□□□□□ -0.49
KDM3B-202ENST00000504095 FOSBP53539 338 aa11.99□□□□□ -0.49
KDM3B-202ENST00000504095 CDC42BPGQ6DT37 1551 aa11.99□□□□□ -0.49
KDM3B-202ENST00000504095 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
KDM3B-202ENST00000504095 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
KDM3B-202ENST00000504095 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
KDM3B-202ENST00000504095 POGKQ9P215 609 aa11.98□□□□□ -0.49
KDM3B-202ENST00000504095 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
KDM3B-202ENST00000504095 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 ATF3P18847 181 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 PIP4K2BP78356 416 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
KDM3B-202ENST00000504095 MST1RQ04912 1400 aa11.96□□□□□ -0.49
KDM3B-202ENST00000504095 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.49
KDM3B-202ENST00000504095 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
KDM3B-202ENST00000504095 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
KDM3B-202ENST00000504095 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
KDM3B-202ENST00000504095 SLAIN2Q9P270 581 aa11.95□□□□□ -0.5
KDM3B-202ENST00000504095 CENPJQ9HC77 1338 aaPredicted RBP11.94□□□□□ -0.5
KDM3B-202ENST00000504095 PTPREP23469 700 aa11.94□□□□□ -0.5
KDM3B-202ENST00000504095 HIRIP3Q9BW71 556 aaPredicted RBP11.94□□□□□ -0.5
KDM3B-202ENST00000504095 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
KDM3B-202ENST00000504095 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
KDM3B-202ENST00000504095 C1orf167Q5SNV9 1468 aa11.93□□□□□ -0.5
KDM3B-202ENST00000504095 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
KDM3B-202ENST00000504095 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
KDM3B-202ENST00000504095 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
KDM3B-202ENST00000504095 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
KDM3B-202ENST00000504095 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
KDM3B-202ENST00000504095 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
KDM3B-202ENST00000504095 NHSL1Q5SYE7 1610 aa11.9□□□□□ -0.5
KDM3B-202ENST00000504095 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
KDM3B-202ENST00000504095 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
KDM3B-202ENST00000504095 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
KDM3B-202ENST00000504095 TULP4Q9NRJ4 1543 aa11.9□□□□□ -0.5
KDM3B-202ENST00000504095 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
KDM3B-202ENST00000504095 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
KDM3B-202ENST00000504095 USP47Q96K76 1375 aa11.89□□□□□ -0.51
KDM3B-202ENST00000504095 AHDC1Q5TGY3 1603 aaPredicted RBP11.89□□□□□ -0.51
KDM3B-202ENST00000504095 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
KDM3B-202ENST00000504095 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
KDM3B-202ENST00000504095 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
KDM3B-202ENST00000504095 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 COL16A1Q07092 1604 aaPredicted RBP11.87□□□□□ -0.51
KDM3B-202ENST00000504095 ST20-MTHFSA0A0A6YYL1 179 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 HSPA1LP34931 641 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 ATP7BP35670 1465 aa11.87□□□□□ -0.51
KDM3B-202ENST00000504095 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
KDM3B-202ENST00000504095 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
KDM3B-202ENST00000504095 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
KDM3B-202ENST00000504095 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
KDM3B-202ENST00000504095 PCDHGA10Q9Y5H3 936 aa11.86□□□□□ -0.51
KDM3B-202ENST00000504095 DPYSL4O14531 572 aa11.85□□□□□ -0.51
KDM3B-202ENST00000504095 TESK2Q96S53 571 aa11.85□□□□□ -0.51
KDM3B-202ENST00000504095 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
KDM3B-202ENST00000504095 PTPN5P54829 565 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms