RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NME9Q86XW9 330 aa31.01■■■□□ 2.55
LSM6-203ENST00000503982 AXIN2Q9Y2T1 843 aa31.01■■■□□ 2.55
LSM6-203ENST00000503982 CD163L1Q9NR16 1453 aa31■■■□□ 2.55
LSM6-203ENST00000503982 WDR17Q8IZU2 1322 aa30.98■■■□□ 2.55
LSM6-203ENST00000503982 NFAT5O94916 1531 aa30.98■■■□□ 2.55
LSM6-203ENST00000503982 WNK3Q9BYP7 1800 aa30.97■■■□□ 2.55
LSM6-203ENST00000503982 SLC24A1O60721 1099 aa30.97■■■□□ 2.55
LSM6-203ENST00000503982 APBA3O96018 575 aa30.97■■■□□ 2.55
LSM6-203ENST00000503982 EDC4Q6P2E9 1401 aaKnown RBP30.97■■■□□ 2.55
LSM6-203ENST00000503982 LTN1O94822 1766 aa30.97■■■□□ 2.55
LSM6-203ENST00000503982 PSDA5PKW4 1024 aaPredicted RBP30.96■■■□□ 2.55
LSM6-203ENST00000503982 PUS7Q96PZ0 661 aaKnown RBP30.96■■■□□ 2.55
LSM6-203ENST00000503982 A0A1W2PP64 1363 aa30.95■■■□□ 2.55
LSM6-203ENST00000503982 DDB1Q16531 1140 aa30.95■■■□□ 2.55
LSM6-203ENST00000503982 USP31Q70CQ4 1352 aa30.94■■■□□ 2.54
LSM6-203ENST00000503982 EZH2Q15910 746 aaKnown RBP30.94■■■□□ 2.54
LSM6-203ENST00000503982 USP54Q70EL1 1684 aa30.93■■■□□ 2.54
LSM6-203ENST00000503982 TESK2Q96S53 571 aa30.93■■■□□ 2.54
LSM6-203ENST00000503982 LRRC37A3O60309 1634 aa30.92■■■□□ 2.54
LSM6-203ENST00000503982 USP47Q96K76 1375 aa30.92■■■□□ 2.54
LSM6-203ENST00000503982 NINLQ9Y2I6 1382 aa30.91■■■□□ 2.54
LSM6-203ENST00000503982 DISP2A7MBM2 1401 aa30.9■■■□□ 2.54
LSM6-203ENST00000503982 TMF1P82094 1093 aa30.9■■■□□ 2.54
LSM6-203ENST00000503982 OVOS2A0A0G2JMS6 1433 aa30.89■■■□□ 2.53
LSM6-203ENST00000503982 OVOS2A0A0J9YW53 1432 aa30.89■■■□□ 2.53
LSM6-203ENST00000503982 OVOS2Q6IE36 1432 aa30.89■■■□□ 2.53
LSM6-203ENST00000503982 CARD10Q9BWT7 1032 aa30.88■■■□□ 2.53
LSM6-203ENST00000503982 ABCC6O95255 1503 aa30.88■■■□□ 2.53
LSM6-203ENST00000503982 C11orf95C9JLR9 678 aaPredicted RBP30.87■■■□□ 2.53
LSM6-203ENST00000503982 CDCA7Q9BWT1 371 aaPredicted RBP30.87■■■□□ 2.53
LSM6-203ENST00000503982 CAMKK2Q96RR4 588 aa30.85■■■□□ 2.53
LSM6-203ENST00000503982 R3HDM1Q15032 1099 aaKnown RBP30.84■■■□□ 2.53
LSM6-203ENST00000503982 NLRP2Q9NX02 1062 aa30.84■■■□□ 2.53
LSM6-203ENST00000503982 CCDC7Q96M83 1385 aa30.83■■■□□ 2.53
LSM6-203ENST00000503982 SBF2Q86WG5 1849 aa30.83■■■□□ 2.53
LSM6-203ENST00000503982 COG3Q96JB2 828 aa30.83■■■□□ 2.53
LSM6-203ENST00000503982 PARD3Q8TEW0 1356 aa30.81■■■□□ 2.52
LSM6-203ENST00000503982 EXOC5O00471 708 aa30.81■■■□□ 2.52
LSM6-203ENST00000503982 PEAK1Q9H792 1746 aa30.81■■■□□ 2.52
LSM6-203ENST00000503982 ANKRD24Q8TF21 1146 aa30.8■■■□□ 2.52
LSM6-203ENST00000503982 TIMELESSQ9UNS1 1208 aa30.8■■■□□ 2.52
LSM6-203ENST00000503982 RREB1Q92766 1687 aa30.79■■■□□ 2.52
LSM6-203ENST00000503982 CDCA8Q53HL2 280 aa30.79■■■□□ 2.52
LSM6-203ENST00000503982 ANKRD36BQ8N2N9 1353 aa30.79■■■□□ 2.52
LSM6-203ENST00000503982 ERBB3P21860 1342 aa30.78■■■□□ 2.52
LSM6-203ENST00000503982 CLSPNQ9HAW4 1339 aa30.78■■■□□ 2.52
LSM6-203ENST00000503982 NUP188Q5SRE5 1749 aa30.77■■■□□ 2.52
LSM6-203ENST00000503982 MARCH10Q8NA82 808 aaPredicted RBP30.77■■■□□ 2.52
LSM6-203ENST00000503982 LTV1Q96GA3 475 aaPredicted RBP30.77■■■□□ 2.52
LSM6-203ENST00000503982 SRCAPQ6ZRS2 3230 aa30.76■■■□□ 2.52
LSM6-203ENST00000503982 NBPF14Q5TI25 921 aa30.76■■■□□ 2.51
LSM6-203ENST00000503982 LRP5O75197 1615 aa30.74■■■□□ 2.51
LSM6-203ENST00000503982 AMPHP49418 695 aa30.73■■■□□ 2.51
LSM6-203ENST00000503982 CCER1Q8TC90 406 aaPredicted RBP30.73■■■□□ 2.51
LSM6-203ENST00000503982 KAT6BQ8WYB5 2073 aa30.72■■■□□ 2.51
LSM6-203ENST00000503982 IL2RBP14784 551 aa30.71■■■□□ 2.51
LSM6-203ENST00000503982 IP6K1Q92551 441 aa30.71■■■□□ 2.51
LSM6-203ENST00000503982 TNS2Q63HR2 1409 aa30.71■■■□□ 2.51
LSM6-203ENST00000503982 KIF20BQ96Q89 1820 aa30.7■■■□□ 2.51
LSM6-203ENST00000503982 BCL11BQ9C0K0 894 aaPredicted RBP30.7■■■□□ 2.51
LSM6-203ENST00000503982 FAM208AQ9UK61 1670 aaKnown RBP30.69■■■□□ 2.5
LSM6-203ENST00000503982 GGNBP2Q9H3C7 697 aa30.69■■■□□ 2.5
LSM6-203ENST00000503982 POLR3GLQ9BT43 218 aa30.68■■■□□ 2.5
LSM6-203ENST00000503982 FBLN1P23142 703 aa30.67■■■□□ 2.5
LSM6-203ENST00000503982 MAP3K19Q56UN5 1328 aa30.67■■■□□ 2.5
LSM6-203ENST00000503982 RGPD3A6NKT7 1758 aaPredicted RBP30.66■■■□□ 2.5
LSM6-203ENST00000503982 RGPD4Q7Z3J3 1758 aa30.66■■■□□ 2.5
LSM6-203ENST00000503982 PTF1AQ7RTS3 328 aa30.65■■■□□ 2.5
LSM6-203ENST00000503982 PLSCR1O15162 318 aa30.64■■■□□ 2.5
LSM6-203ENST00000503982 HOXC9P31274 260 aa30.64■■■□□ 2.5
LSM6-203ENST00000503982 FYB1O15117 783 aa30.63■■■□□ 2.49
LSM6-203ENST00000503982 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
LSM6-203ENST00000503982 MYOM1P52179 1685 aa30.62■■■□□ 2.49
LSM6-203ENST00000503982 RGPD2P0DJD1 1756 aa30.62■■■□□ 2.49
LSM6-203ENST00000503982 RRS1Q15050 365 aaKnown RBP30.62■■■□□ 2.49
LSM6-203ENST00000503982 BCL9O00512 1426 aa30.62■■■□□ 2.49
LSM6-203ENST00000503982 NHSQ6T4R5 1651 aa30.58■■■□□ 2.49
LSM6-203ENST00000503982 NSD3Q9BZ95 1437 aa30.57■■■□□ 2.48
LSM6-203ENST00000503982 DDX54Q8TDD1 881 aaKnown RBP30.57■■■□□ 2.48
LSM6-203ENST00000503982 RTL1A6NKG5 1358 aa30.56■■■□□ 2.48
LSM6-203ENST00000503982 KCNQ2O43526 872 aa30.56■■■□□ 2.48
LSM6-203ENST00000503982 SMG6Q86US8 1419 aaKnown RBP30.56■■■□□ 2.48
LSM6-203ENST00000503982 EIF4G2P78344 907 aaKnown RBP eCLIP30.53■■■□□ 2.48
LSM6-203ENST00000503982 TXNRD1Q16881 649 aa30.51■■■□□ 2.47
LSM6-203ENST00000503982 CARD14Q9BXL6 1004 aa30.51■■■□□ 2.47
LSM6-203ENST00000503982 BTAF1O14981 1849 aa30.51■■■□□ 2.47
LSM6-203ENST00000503982 USHBP1Q8N6Y0 703 aa30.49■■■□□ 2.47
LSM6-203ENST00000503982 ANO8Q9HCE9 1232 aaPredicted RBP30.49■■■□□ 2.47
LSM6-203ENST00000503982 STK32BQ9NY57 414 aa30.49■■■□□ 2.47
LSM6-203ENST00000503982 HSPA5P11021 654 aaKnown RBP30.48■■■□□ 2.47
LSM6-203ENST00000503982 PPP1R1BQ9UD71 204 aaPredicted RBP30.48■■■□□ 2.47
LSM6-203ENST00000503982 PROM2Q8N271 834 aa30.47■■■□□ 2.47
LSM6-203ENST00000503982 FLT4P35916 1363 aa30.46■■■□□ 2.47
LSM6-203ENST00000503982 PPM1GO15355 546 aaPredicted RBP30.46■■■□□ 2.47
LSM6-203ENST00000503982 SYTL4Q96C24 671 aaPredicted RBP30.46■■■□□ 2.47
LSM6-203ENST00000503982 SPON1Q9HCB6 807 aa30.46■■■□□ 2.47
LSM6-203ENST00000503982 HSP90AB2PQ58FF8 381 aa30.45■■■□□ 2.47
LSM6-203ENST00000503982 NBPF6Q5VWK0 638 aa30.45■■■□□ 2.47
LSM6-203ENST00000503982 ZCRB1Q8TBF4 217 aaKnown RBP30.45■■■□□ 2.47
LSM6-203ENST00000503982 RAPGEF4Q8WZA2 1011 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms