RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
NR1I3-218ENST00000503547 EVC2Q86UK5 1308 aa12.8□□□□□ -0.36
NR1I3-218ENST00000503547 LTN1O94822 1766 aa12.79□□□□□ -0.36
NR1I3-218ENST00000503547 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
NR1I3-218ENST00000503547 DCAF8L1A6NGE4 600 aa12.79□□□□□ -0.36
NR1I3-218ENST00000503547 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
NR1I3-218ENST00000503547 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
NR1I3-218ENST00000503547 YY1P25490 414 aa12.78□□□□□ -0.36
NR1I3-218ENST00000503547 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
NR1I3-218ENST00000503547 KCNQ2O43526 872 aa12.77□□□□□ -0.37
NR1I3-218ENST00000503547 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
NR1I3-218ENST00000503547 MSH5O43196 834 aa12.76□□□□□ -0.37
NR1I3-218ENST00000503547 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
NR1I3-218ENST00000503547 ROCK2O75116 1388 aaKnown RBP12.76□□□□□ -0.37
NR1I3-218ENST00000503547 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
NR1I3-218ENST00000503547 MYOM1P52179 1685 aa12.76□□□□□ -0.37
NR1I3-218ENST00000503547 PLSCR1O15162 318 aa12.75□□□□□ -0.37
NR1I3-218ENST00000503547 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
NR1I3-218ENST00000503547 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
NR1I3-218ENST00000503547 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-218ENST00000503547 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
NR1I3-218ENST00000503547 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
NR1I3-218ENST00000503547 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-218ENST00000503547 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-218ENST00000503547 CHD4Q14839 1912 aa12.74□□□□□ -0.37
NR1I3-218ENST00000503547 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 NFAT5O94916 1531 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 KTN1Q86UP2 1357 aaKnown RBP12.73□□□□□ -0.37
NR1I3-218ENST00000503547 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
NR1I3-218ENST00000503547 BTAF1O14981 1849 aa12.73□□□□□ -0.37
NR1I3-218ENST00000503547 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
NR1I3-218ENST00000503547 CARD10Q9BWT7 1032 aa12.72□□□□□ -0.37
NR1I3-218ENST00000503547 ABCC6O95255 1503 aa12.72□□□□□ -0.37
NR1I3-218ENST00000503547 TNS2Q63HR2 1409 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 EXOC5O00471 708 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
NR1I3-218ENST00000503547 SIN3AQ96ST3 1273 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
NR1I3-218ENST00000503547 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
NR1I3-218ENST00000503547 ADRA2BP18089 450 aa12.7□□□□□ -0.38
NR1I3-218ENST00000503547 PDGFDQ9GZP0 370 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-218ENST00000503547 BCL9O00512 1426 aa12.7□□□□□ -0.38
NR1I3-218ENST00000503547 UTRNP46939 3433 aa12.69□□□□□ -0.38
NR1I3-218ENST00000503547 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
NR1I3-218ENST00000503547 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-218ENST00000503547 PROM2Q8N271 834 aa12.68□□□□□ -0.38
NR1I3-218ENST00000503547 NLRP2Q9NX02 1062 aa12.68□□□□□ -0.38
NR1I3-218ENST00000503547 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
NR1I3-218ENST00000503547 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
NR1I3-218ENST00000503547 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
NR1I3-218ENST00000503547 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
NR1I3-218ENST00000503547 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
NR1I3-218ENST00000503547 ERBB3P21860 1342 aa12.65□□□□□ -0.38
NR1I3-218ENST00000503547 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-218ENST00000503547 NME9Q86XW9 330 aa12.65□□□□□ -0.38
NR1I3-218ENST00000503547 RGPD2P0DJD1 1756 aa12.65□□□□□ -0.38
NR1I3-218ENST00000503547 PAPPAQ13219 1627 aa12.65□□□□□ -0.38
NR1I3-218ENST00000503547 IL2RBP14784 551 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 PTGER2P43116 358 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
NR1I3-218ENST00000503547 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
NR1I3-218ENST00000503547 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
NR1I3-218ENST00000503547 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-218ENST00000503547 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
NR1I3-218ENST00000503547 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
NR1I3-218ENST00000503547 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
NR1I3-218ENST00000503547 EDC4Q6P2E9 1401 aaKnown RBP12.62□□□□□ -0.39
NR1I3-218ENST00000503547 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
NR1I3-218ENST00000503547 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
NR1I3-218ENST00000503547 GOLGB1Q14789 3259 aaKnown RBP12.6□□□□□ -0.39
NR1I3-218ENST00000503547 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
NR1I3-218ENST00000503547 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
NR1I3-218ENST00000503547 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
NR1I3-218ENST00000503547 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
NR1I3-218ENST00000503547 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
NR1I3-218ENST00000503547 DDX54Q8TDD1 881 aaKnown RBP12.59□□□□□ -0.39
NR1I3-218ENST00000503547 ARXQ96QS3 562 aa12.59□□□□□ -0.39
NR1I3-218ENST00000503547 LY75O60449 1722 aa12.59□□□□□ -0.39
NR1I3-218ENST00000503547 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
NR1I3-218ENST00000503547 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-218ENST00000503547 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-218ENST00000503547 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
NR1I3-218ENST00000503547 KIF20BQ96Q89 1820 aa12.56□□□□□ -0.4
NR1I3-218ENST00000503547 IP6K1Q92551 441 aa12.56□□□□□ -0.4
NR1I3-218ENST00000503547 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
NR1I3-218ENST00000503547 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
NR1I3-218ENST00000503547 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
NR1I3-218ENST00000503547 POLD1P28340 1107 aa12.55□□□□□ -0.4
NR1I3-218ENST00000503547 GPR162Q16538 588 aa12.55□□□□□ -0.4
NR1I3-218ENST00000503547 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
NR1I3-218ENST00000503547 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
NR1I3-218ENST00000503547 COG3Q96JB2 828 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms