RNA–Protein interactions for RNA: ENST00000503248.1

PHF3-206, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-206ENST00000503248 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
PHF3-206ENST00000503248 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
PHF3-206ENST00000503248 HDGFL1Q5TGJ6 251 aa8.11□□□□□ -1.11
PHF3-206ENST00000503248 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
PHF3-206ENST00000503248 ZNF777Q9ULD5 760 aaPredicted RBP8.11□□□□□ -1.11
PHF3-206ENST00000503248 NR5A1Q13285 461 aa8.1□□□□□ -1.11
PHF3-206ENST00000503248 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
PHF3-206ENST00000503248 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
PHF3-206ENST00000503248 MAP7D1Q3KQU3 841 aa8.09□□□□□ -1.11
PHF3-206ENST00000503248 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
PHF3-206ENST00000503248 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
PHF3-206ENST00000503248 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
PHF3-206ENST00000503248 POM121CA8CG34 1229 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 ESPNB1AK53 854 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 SIAH2O43255 324 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 ADH1CP00326 375 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 SIRT1Q96EB6 747 aa8.08□□□□□ -1.12
PHF3-206ENST00000503248 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
PHF3-206ENST00000503248 PKD2L1Q9P0L9 805 aa8.07□□□□□ -1.12
PHF3-206ENST00000503248 TTC24A2A3L6 582 aaPredicted RBP8.06□□□□□ -1.12
PHF3-206ENST00000503248 GDF9O60383 454 aa8.06□□□□□ -1.12
PHF3-206ENST00000503248 FOXC1Q12948 553 aa8.06□□□□□ -1.12
PHF3-206ENST00000503248 RNF135Q8IUD6 432 aa8.06□□□□□ -1.12
PHF3-206ENST00000503248 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
PHF3-206ENST00000503248 ARID5BQ14865 1188 aa8.05□□□□□ -1.12
PHF3-206ENST00000503248 SUPT5HO00267 1087 aaKnown RBP8.04□□□□□ -1.12
PHF3-206ENST00000503248 ATP9BO43861 1147 aa8.04□□□□□ -1.12
PHF3-206ENST00000503248 ADAMTS19Q8TE59 1207 aa8.04□□□□□ -1.12
PHF3-206ENST00000503248 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
PHF3-206ENST00000503248 CHIC2Q9UKJ5 165 aa8.04□□□□□ -1.12
PHF3-206ENST00000503248 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 FSHRP23945 695 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 PLEKHM2Q8IWE5 1019 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
PHF3-206ENST00000503248 TOR4AQ9NXH8 423 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 PDZRN3Q9UPQ7 1066 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
PHF3-206ENST00000503248 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
PHF3-206ENST00000503248 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
PHF3-206ENST00000503248 PHTF2Q8N3S3 785 aa8.02□□□□□ -1.13
PHF3-206ENST00000503248 DOLKQ9UPQ8 538 aa8.02□□□□□ -1.13
PHF3-206ENST00000503248 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
PHF3-206ENST00000503248 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
PHF3-206ENST00000503248 MYCP01106 439 aaPredicted RBP8.01□□□□□ -1.13
PHF3-206ENST00000503248 GRM5P41594 1212 aa8.01□□□□□ -1.13
PHF3-206ENST00000503248 USP4Q13107 963 aa8.01□□□□□ -1.13
PHF3-206ENST00000503248 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
PHF3-206ENST00000503248 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
PHF3-206ENST00000503248 PALM3A6NDB9 673 aaPredicted RBP8□□□□□ -1.13
PHF3-206ENST00000503248 SKIP12755 728 aa8□□□□□ -1.13
PHF3-206ENST00000503248 EML3Q32P44 896 aa8□□□□□ -1.13
PHF3-206ENST00000503248 TRIM50Q86XT4 487 aa8□□□□□ -1.13
PHF3-206ENST00000503248 PLPP7Q8NBV4 271 aa8□□□□□ -1.13
PHF3-206ENST00000503248 TNFRSF10AO00220 468 aa7.99□□□□□ -1.13
PHF3-206ENST00000503248 NNTQ13423 1086 aa7.99□□□□□ -1.13
PHF3-206ENST00000503248 TRIM67Q6ZTA4 783 aa7.99□□□□□ -1.13
PHF3-206ENST00000503248 UCN2Q96RP3 112 aa7.99□□□□□ -1.13
PHF3-206ENST00000503248 MAFBQ9Y5Q3 323 aaPredicted RBP7.99□□□□□ -1.13
PHF3-206ENST00000503248 USP17L5A8MUK1 530 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 ATP5J2-PTCD1G3V325 749 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 DGAT1O75907 488 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 MYT1Q01538 1121 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 C1orf115Q9H7X2 142 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 TFIP11Q9UBB9 837 aaKnown RBP7.98□□□□□ -1.13
PHF3-206ENST00000503248 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 PCDHB11Q9Y5F2 797 aa7.98□□□□□ -1.13
PHF3-206ENST00000503248 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
PHF3-206ENST00000503248 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
PHF3-206ENST00000503248 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
PHF3-206ENST00000503248 USP17L2Q6R6M4 530 aa7.97□□□□□ -1.13
PHF3-206ENST00000503248 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
PHF3-206ENST00000503248 ERVH48-1M5A8F1 160 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 SMPD1P17405 629 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 PDE4CQ08493 712 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 CTC1Q2NKJ3 1217 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 PPP1R26Q5T8A7 1209 aaPredicted RBP7.96□□□□□ -1.14
PHF3-206ENST00000503248 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.14
PHF3-206ENST00000503248 CYP2U1Q7Z449 544 aa7.95□□□□□ -1.14
PHF3-206ENST00000503248 CCDC85AQ96PX6 553 aaPredicted RBP7.95□□□□□ -1.14
PHF3-206ENST00000503248 J3QL48 77 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 AVPP01185 164 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 LMOD1P29536 600 aaPredicted RBP7.94□□□□□ -1.14
PHF3-206ENST00000503248 NCOA4Q13772 614 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 PKDCCQ504Y2 493 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 VRTNQ9H8Y1 702 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
PHF3-206ENST00000503248 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
PHF3-206ENST00000503248 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
PHF3-206ENST00000503248 NR3C2P08235 984 aa7.93□□□□□ -1.14
PHF3-206ENST00000503248 RAB15P59190 212 aa7.93□□□□□ -1.14
PHF3-206ENST00000503248 RBM19Q9Y4C8 960 aaKnown RBP7.93□□□□□ -1.14
PHF3-206ENST00000503248 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms