RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
SCLT1-204ENST00000503215 USP31Q70CQ4 1352 aa22.95■■□□□ 1.26
SCLT1-204ENST00000503215 PSDA5PKW4 1024 aaPredicted RBP22.94■■□□□ 1.26
SCLT1-204ENST00000503215 PUS7Q96PZ0 661 aaKnown RBP22.94■■□□□ 1.26
SCLT1-204ENST00000503215 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
SCLT1-204ENST00000503215 A0A1W2PP64 1363 aa22.94■■□□□ 1.26
SCLT1-204ENST00000503215 RGPD1P0DJD0 1748 aa22.93■■□□□ 1.26
SCLT1-204ENST00000503215 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
SCLT1-204ENST00000503215 TNS1Q9HBL0 1735 aaKnown RBP22.93■■□□□ 1.26
SCLT1-204ENST00000503215 CAMKK2Q96RR4 588 aa22.92■■□□□ 1.26
SCLT1-204ENST00000503215 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
SCLT1-204ENST00000503215 DISP2A7MBM2 1401 aa22.92■■□□□ 1.26
SCLT1-204ENST00000503215 APBA3O96018 575 aa22.91■■□□□ 1.26
SCLT1-204ENST00000503215 CSB-PGBD3P0DP91 1061 aa22.9■■□□□ 1.26
SCLT1-204ENST00000503215 EDC4Q6P2E9 1401 aaKnown RBP22.9■■□□□ 1.26
SCLT1-204ENST00000503215 USP47Q96K76 1375 aa22.89■■□□□ 1.25
SCLT1-204ENST00000503215 CARD10Q9BWT7 1032 aa22.89■■□□□ 1.25
SCLT1-204ENST00000503215 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
SCLT1-204ENST00000503215 DDB1Q16531 1140 aa22.88■■□□□ 1.25
SCLT1-204ENST00000503215 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
SCLT1-204ENST00000503215 R3HDM1Q15032 1099 aaKnown RBP22.86■■□□□ 1.25
SCLT1-204ENST00000503215 MARCH10Q8NA82 808 aaPredicted RBP22.86■■□□□ 1.25
SCLT1-204ENST00000503215 FBLN1P23142 703 aa22.85■■□□□ 1.25
SCLT1-204ENST00000503215 LRRC37A3O60309 1634 aa22.85■■□□□ 1.25
SCLT1-204ENST00000503215 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
SCLT1-204ENST00000503215 OVOS2A0A0J9YW53 1432 aa22.84■■□□□ 1.25
SCLT1-204ENST00000503215 OVOS2Q6IE36 1432 aa22.84■■□□□ 1.25
SCLT1-204ENST00000503215 PEAK1Q9H792 1746 aa22.82■■□□□ 1.24
SCLT1-204ENST00000503215 ERBB3P21860 1342 aa22.82■■□□□ 1.24
SCLT1-204ENST00000503215 NINLQ9Y2I6 1382 aa22.81■■□□□ 1.24
SCLT1-204ENST00000503215 TMF1P82094 1093 aa22.81■■□□□ 1.24
SCLT1-204ENST00000503215 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
SCLT1-204ENST00000503215 OVOS2A0A0G2JMS6 1433 aa22.81■■□□□ 1.24
SCLT1-204ENST00000503215 ANKRD24Q8TF21 1146 aa22.8■■□□□ 1.24
SCLT1-204ENST00000503215 CDCA7Q9BWT1 371 aaPredicted RBP22.8■■□□□ 1.24
SCLT1-204ENST00000503215 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
SCLT1-204ENST00000503215 ANKRD36BQ8N2N9 1353 aa22.79■■□□□ 1.24
SCLT1-204ENST00000503215 ABCC6O95255 1503 aa22.78■■□□□ 1.24
SCLT1-204ENST00000503215 WNK3Q9BYP7 1800 aa22.78■■□□□ 1.24
SCLT1-204ENST00000503215 LTN1O94822 1766 aa22.78■■□□□ 1.24
SCLT1-204ENST00000503215 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
SCLT1-204ENST00000503215 EXOC5O00471 708 aa22.77■■□□□ 1.24
SCLT1-204ENST00000503215 PARD3Q8TEW0 1356 aa22.77■■□□□ 1.24
SCLT1-204ENST00000503215 IP6K1Q92551 441 aa22.76■■□□□ 1.23
SCLT1-204ENST00000503215 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
SCLT1-204ENST00000503215 COG3Q96JB2 828 aa22.76■■□□□ 1.23
SCLT1-204ENST00000503215 TIMELESSQ9UNS1 1208 aa22.76■■□□□ 1.23
SCLT1-204ENST00000503215 FYB1O15117 783 aa22.76■■□□□ 1.23
SCLT1-204ENST00000503215 MAP3K19Q56UN5 1328 aa22.75■■□□□ 1.23
SCLT1-204ENST00000503215 CLSPNQ9HAW4 1339 aa22.75■■□□□ 1.23
SCLT1-204ENST00000503215 C11orf95C9JLR9 678 aaPredicted RBP22.75■■□□□ 1.23
SCLT1-204ENST00000503215 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
SCLT1-204ENST00000503215 GGNBP2Q9H3C7 697 aa22.75■■□□□ 1.23
SCLT1-204ENST00000503215 SBF2Q86WG5 1849 aa22.75■■□□□ 1.23
SCLT1-204ENST00000503215 RREB1Q92766 1687 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 KCNQ2O43526 872 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 IL2RBP14784 551 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 PROM2Q8N271 834 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 CARD14Q9BXL6 1004 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 BCL9O00512 1426 aa22.72■■□□□ 1.23
SCLT1-204ENST00000503215 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
SCLT1-204ENST00000503215 HOXC9P31274 260 aa22.71■■□□□ 1.23
SCLT1-204ENST00000503215 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
SCLT1-204ENST00000503215 TNS2Q63HR2 1409 aa22.71■■□□□ 1.23
SCLT1-204ENST00000503215 PLSCR1O15162 318 aa22.7■■□□□ 1.22
SCLT1-204ENST00000503215 LRP5O75197 1615 aa22.69■■□□□ 1.22
SCLT1-204ENST00000503215 AMPHP49418 695 aa22.69■■□□□ 1.22
SCLT1-204ENST00000503215 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
SCLT1-204ENST00000503215 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
SCLT1-204ENST00000503215 ACSBG1Q96GR2 724 aa22.68■■□□□ 1.22
SCLT1-204ENST00000503215 NBPF14Q5TI25 921 aa22.67■■□□□ 1.22
SCLT1-204ENST00000503215 ANO8Q9HCE9 1232 aaPredicted RBP22.66■■□□□ 1.22
SCLT1-204ENST00000503215 DDX54Q8TDD1 881 aaKnown RBP22.63■■□□□ 1.21
SCLT1-204ENST00000503215 MYOM1P52179 1685 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 TXNRD1Q16881 649 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 NBPF6Q5VWK0 638 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 NBPF4Q96M43 638 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 POLR3GLQ9BT43 218 aa22.62■■□□□ 1.21
SCLT1-204ENST00000503215 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
SCLT1-204ENST00000503215 HSP90AB2PQ58FF8 381 aa22.61■■□□□ 1.21
SCLT1-204ENST00000503215 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
SCLT1-204ENST00000503215 RGPD2P0DJD1 1756 aa22.6■■□□□ 1.21
SCLT1-204ENST00000503215 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
SCLT1-204ENST00000503215 RGPD3A6NKT7 1758 aaPredicted RBP22.58■■□□□ 1.21
SCLT1-204ENST00000503215 RGPD4Q7Z3J3 1758 aa22.58■■□□□ 1.21
SCLT1-204ENST00000503215 RTL1A6NKG5 1358 aa22.58■■□□□ 1.21
SCLT1-204ENST00000503215 FAM208AQ9UK61 1670 aaKnown RBP22.57■■□□□ 1.2
SCLT1-204ENST00000503215 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
SCLT1-204ENST00000503215 MEGF6O75095 1541 aa22.57■■□□□ 1.2
SCLT1-204ENST00000503215 KAT6BQ8WYB5 2073 aa22.56■■□□□ 1.2
SCLT1-204ENST00000503215 NHSQ6T4R5 1651 aa22.56■■□□□ 1.2
SCLT1-204ENST00000503215 KIF20BQ96Q89 1820 aa22.56■■□□□ 1.2
SCLT1-204ENST00000503215 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
SCLT1-204ENST00000503215 ZCRB1Q8TBF4 217 aaKnown RBP22.54■■□□□ 1.2
SCLT1-204ENST00000503215 INSRP06213 1382 aa22.54■■□□□ 1.2
SCLT1-204ENST00000503215 FLT4P35916 1363 aa22.52■■□□□ 1.2
SCLT1-204ENST00000503215 PPM1GO15355 546 aaPredicted RBP22.51■■□□□ 1.19
SCLT1-204ENST00000503215 PRIM1P49642 420 aaKnown RBP22.51■■□□□ 1.19
SCLT1-204ENST00000503215 SPON1Q9HCB6 807 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 388.9 ms