RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
RFC1-205ENST00000502991 MAP4K5Q9Y4K4 846 aa8.77□□□□□ -1.01
RFC1-205ENST00000502991 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1.01
RFC1-205ENST00000502991 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
RFC1-205ENST00000502991 ZIC2O95409 532 aaPredicted RBP8.76□□□□□ -1.01
RFC1-205ENST00000502991 NR5A1Q13285 461 aa8.76□□□□□ -1.01
RFC1-205ENST00000502991 TMEM132AQ24JP5 1023 aa8.76□□□□□ -1.01
RFC1-205ENST00000502991 KCTD15Q96SI1 283 aaPredicted RBP8.76□□□□□ -1.01
RFC1-205ENST00000502991 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
RFC1-205ENST00000502991 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
RFC1-205ENST00000502991 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
RFC1-205ENST00000502991 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
RFC1-205ENST00000502991 TRIM46Q7Z4K8 759 aa8.74□□□□□ -1.01
RFC1-205ENST00000502991 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
RFC1-205ENST00000502991 SOCS7O14512 581 aa8.73□□□□□ -1.01
RFC1-205ENST00000502991 IRF5Q13568 498 aa8.73□□□□□ -1.01
RFC1-205ENST00000502991 PPP1R26Q5T8A7 1209 aaPredicted RBP8.73□□□□□ -1.01
RFC1-205ENST00000502991 CCDC116Q8IYX3 515 aa8.73□□□□□ -1.01
RFC1-205ENST00000502991 ABL2P42684 1182 aa8.72□□□□□ -1.01
RFC1-205ENST00000502991 NR1H3Q13133 447 aa8.72□□□□□ -1.01
RFC1-205ENST00000502991 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.02
RFC1-205ENST00000502991 APBB1O00213 710 aa8.71□□□□□ -1.02
RFC1-205ENST00000502991 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
RFC1-205ENST00000502991 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
RFC1-205ENST00000502991 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
RFC1-205ENST00000502991 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
RFC1-205ENST00000502991 CBLBQ13191 982 aa8.7□□□□□ -1.02
RFC1-205ENST00000502991 VAC14Q08AM6 782 aa8.69□□□□□ -1.02
RFC1-205ENST00000502991 NBPF20Q3BBV1 942 aa8.69□□□□□ -1.02
RFC1-205ENST00000502991 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
RFC1-205ENST00000502991 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
RFC1-205ENST00000502991 ERVH48-1M5A8F1 160 aa8.68□□□□□ -1.02
RFC1-205ENST00000502991 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
RFC1-205ENST00000502991 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
RFC1-205ENST00000502991 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
RFC1-205ENST00000502991 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
RFC1-205ENST00000502991 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
RFC1-205ENST00000502991 ESPNB1AK53 854 aa8.67□□□□□ -1.02
RFC1-205ENST00000502991 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
RFC1-205ENST00000502991 ZNF784Q8NCA9 323 aaPredicted RBP8.66□□□□□ -1.02
RFC1-205ENST00000502991 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
RFC1-205ENST00000502991 PRM3Q9NNZ6 103 aa8.66□□□□□ -1.02
RFC1-205ENST00000502991 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
RFC1-205ENST00000502991 SOBPA7XYQ1 873 aa8.64□□□□□ -1.03
RFC1-205ENST00000502991 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
RFC1-205ENST00000502991 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
RFC1-205ENST00000502991 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
RFC1-205ENST00000502991 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
RFC1-205ENST00000502991 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
RFC1-205ENST00000502991 BMP2P12643 396 aa8.63□□□□□ -1.03
RFC1-205ENST00000502991 SCARF1Q14162 830 aa8.63□□□□□ -1.03
RFC1-205ENST00000502991 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
RFC1-205ENST00000502991 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
RFC1-205ENST00000502991 LILRA1O75019 489 aa8.62□□□□□ -1.03
RFC1-205ENST00000502991 UBTFP17480 764 aaKnown RBP8.62□□□□□ -1.03
RFC1-205ENST00000502991 RELBQ01201 579 aa8.62□□□□□ -1.03
RFC1-205ENST00000502991 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
RFC1-205ENST00000502991 FLIIQ13045 1269 aa8.61□□□□□ -1.03
RFC1-205ENST00000502991 Q6ZVU0 165 aa8.61□□□□□ -1.03
RFC1-205ENST00000502991 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
RFC1-205ENST00000502991 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
RFC1-205ENST00000502991 TSGA10IPQ3SY00 556 aa8.6□□□□□ -1.03
RFC1-205ENST00000502991 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
RFC1-205ENST00000502991 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
RFC1-205ENST00000502991 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
RFC1-205ENST00000502991 UPP2O95045 317 aa8.59□□□□□ -1.03
RFC1-205ENST00000502991 SCTRP47872 440 aa8.59□□□□□ -1.03
RFC1-205ENST00000502991 EIF4G2P78344 907 aaKnown RBP eCLIP8.59□□□□□ -1.03
RFC1-205ENST00000502991 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
RFC1-205ENST00000502991 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
RFC1-205ENST00000502991 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
RFC1-205ENST00000502991 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
RFC1-205ENST00000502991 RAD21O60216 631 aa8.58□□□□□ -1.04
RFC1-205ENST00000502991 KDF1Q8NAX2 398 aaPredicted RBP8.58□□□□□ -1.04
RFC1-205ENST00000502991 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
RFC1-205ENST00000502991 POM121CA8CG34 1229 aa8.57□□□□□ -1.04
RFC1-205ENST00000502991 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
RFC1-205ENST00000502991 WASHC4Q2M389 1173 aa8.57□□□□□ -1.04
RFC1-205ENST00000502991 INSM2Q96T92 566 aaPredicted RBP8.57□□□□□ -1.04
RFC1-205ENST00000502991 FIGNL2A6NMB9 653 aa8.56□□□□□ -1.04
RFC1-205ENST00000502991 ADH1AP07327 375 aa8.56□□□□□ -1.04
RFC1-205ENST00000502991 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
RFC1-205ENST00000502991 SPINT1O43278 529 aa8.55□□□□□ -1.04
RFC1-205ENST00000502991 MAN1A2O60476 641 aa8.55□□□□□ -1.04
RFC1-205ENST00000502991 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
RFC1-205ENST00000502991 VEGFBP49765 207 aa8.55□□□□□ -1.04
RFC1-205ENST00000502991 DNMT3LQ9UJW3 386 aa8.55□□□□□ -1.04
RFC1-205ENST00000502991 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
RFC1-205ENST00000502991 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 SLFNL1Q499Z3 407 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 PHTF2Q8N3S3 785 aa8.54□□□□□ -1.04
RFC1-205ENST00000502991 PTGIRP43119 386 aa8.53□□□□□ -1.04
RFC1-205ENST00000502991 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
RFC1-205ENST00000502991 ZNF592Q92610 1267 aa8.53□□□□□ -1.04
RFC1-205ENST00000502991 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
RFC1-205ENST00000502991 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms