RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 KIAA1210Q9ULL0 1709 aa26.31■■□□□ 1.8
HERC6-204ENST00000502870 PTGER2P43116 358 aa26.3■■□□□ 1.8
HERC6-204ENST00000502870 SENP3-EIF4A1A0A087X0R7 540 aa26.29■■□□□ 1.8
HERC6-204ENST00000502870 SRPK2P78362 688 aaKnown RBP26.29■■□□□ 1.8
HERC6-204ENST00000502870 ATF5Q9Y2D1 282 aaPredicted RBP26.29■■□□□ 1.8
HERC6-204ENST00000502870 PDGFDQ9GZP0 370 aaPredicted RBP26.28■■□□□ 1.8
HERC6-204ENST00000502870 SLIT3O75094 1523 aa26.28■■□□□ 1.8
HERC6-204ENST00000502870 SYT17Q9BSW7 474 aa26.27■■□□□ 1.8
HERC6-204ENST00000502870 FHDC1Q9C0D6 1143 aaPredicted RBP26.27■■□□□ 1.8
HERC6-204ENST00000502870 WDR17Q8IZU2 1322 aa26.26■■□□□ 1.79
HERC6-204ENST00000502870 NLRP6P59044 892 aa26.26■■□□□ 1.79
HERC6-204ENST00000502870 PROM2Q8N271 834 aa26.26■■□□□ 1.79
HERC6-204ENST00000502870 MTFR1LQ9H019 292 aa26.26■■□□□ 1.79
HERC6-204ENST00000502870 SLC15A2Q16348 729 aa26.25■■□□□ 1.79
HERC6-204ENST00000502870 TXNRD1Q16881 649 aa26.25■■□□□ 1.79
HERC6-204ENST00000502870 MARCH10Q8NA82 808 aaPredicted RBP26.25■■□□□ 1.79
HERC6-204ENST00000502870 PTF1AQ7RTS3 328 aa26.24■■□□□ 1.79
HERC6-204ENST00000502870 COL18A1P39060 1754 aa26.24■■□□□ 1.79
HERC6-204ENST00000502870 USP6P35125 1406 aa26.22■■□□□ 1.79
HERC6-204ENST00000502870 C1QTNF8P60827 252 aa26.22■■□□□ 1.79
HERC6-204ENST00000502870 UTRNP46939 3433 aa26.22■■□□□ 1.79
HERC6-204ENST00000502870 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
HERC6-204ENST00000502870 CPSF1Q10570 1443 aaKnown RBP26.19■■□□□ 1.78
HERC6-204ENST00000502870 CENPJQ9HC77 1338 aaPredicted RBP26.18■■□□□ 1.78
HERC6-204ENST00000502870 CSB-PGBD3P0DP91 1061 aa26.18■■□□□ 1.78
HERC6-204ENST00000502870 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
HERC6-204ENST00000502870 PIK3C2AO00443 1686 aa26.18■■□□□ 1.78
HERC6-204ENST00000502870 EXOC5O00471 708 aa26.17■■□□□ 1.78
HERC6-204ENST00000502870 CARD10Q9BWT7 1032 aa26.17■■□□□ 1.78
HERC6-204ENST00000502870 RGPD5Q99666 1765 aa26.17■■□□□ 1.78
HERC6-204ENST00000502870 MAP3K5Q99683 1374 aa26.17■■□□□ 1.78
HERC6-204ENST00000502870 KCNH5Q8NCM2 988 aa26.16■■□□□ 1.78
HERC6-204ENST00000502870 ARXQ96QS3 562 aa26.16■■□□□ 1.78
HERC6-204ENST00000502870 SGIP1Q9BQI5 828 aa26.16■■□□□ 1.78
HERC6-204ENST00000502870 NHSQ6T4R5 1651 aa26.15■■□□□ 1.78
HERC6-204ENST00000502870 AXIN2Q9Y2T1 843 aa26.15■■□□□ 1.78
HERC6-204ENST00000502870 CABP1Q9NZU7 370 aa26.14■■□□□ 1.78
HERC6-204ENST00000502870 CCDC7Q96M83 1385 aa26.14■■□□□ 1.78
HERC6-204ENST00000502870 TNS2Q63HR2 1409 aa26.13■■□□□ 1.77
HERC6-204ENST00000502870 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
HERC6-204ENST00000502870 ARHGEF25Q86VW2 580 aa26.11■■□□□ 1.77
HERC6-204ENST00000502870 ABCC6O95255 1503 aa26.1■■□□□ 1.77
HERC6-204ENST00000502870 GPR162Q16538 588 aa26.09■■□□□ 1.77
HERC6-204ENST00000502870 PAPPAQ13219 1627 aa26.09■■□□□ 1.77
HERC6-204ENST00000502870 GIGYF1O75420 1035 aaPredicted RBP26.08■■□□□ 1.77
HERC6-204ENST00000502870 NBPF1Q3BBV0 1214 aa26.08■■□□□ 1.77
HERC6-204ENST00000502870 IFFO2Q5TF58 517 aa26.08■■□□□ 1.77
HERC6-204ENST00000502870 KAT6BQ8WYB5 2073 aa26.08■■□□□ 1.77
HERC6-204ENST00000502870 ZNF692Q9BU19 519 aaPredicted RBP26.06■■□□□ 1.76
HERC6-204ENST00000502870 BTAF1O14981 1849 aa26.04■■□□□ 1.76
HERC6-204ENST00000502870 SOX12O15370 315 aa26.04■■□□□ 1.76
HERC6-204ENST00000502870 EVC2Q86UK5 1308 aa26.04■■□□□ 1.76
HERC6-204ENST00000502870 TTC21AQ8NDW8 1320 aa26.04■■□□□ 1.76
HERC6-204ENST00000502870 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
HERC6-204ENST00000502870 POLD1P28340 1107 aa26.02■■□□□ 1.76
HERC6-204ENST00000502870 TTC21BQ7Z4L5 1316 aa26.02■■□□□ 1.76
HERC6-204ENST00000502870 NFAT5O94916 1531 aa26.02■■□□□ 1.76
HERC6-204ENST00000502870 SLC16A10Q8TF71 515 aa26.01■■□□□ 1.75
HERC6-204ENST00000502870 ACSBG1Q96GR2 724 aa26.01■■□□□ 1.75
HERC6-204ENST00000502870 KLHL34Q8N239 644 aa25.99■■□□□ 1.75
HERC6-204ENST00000502870 ZNF827Q17R98 1081 aa25.97■■□□□ 1.75
HERC6-204ENST00000502870 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
HERC6-204ENST00000502870 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
HERC6-204ENST00000502870 IL2RBP14784 551 aa25.96■■□□□ 1.75
HERC6-204ENST00000502870 NLRP2Q9NX02 1062 aa25.96■■□□□ 1.75
HERC6-204ENST00000502870 CEP350Q5VT06 3117 aa25.95■■□□□ 1.74
HERC6-204ENST00000502870 ERBB3P21860 1342 aa25.93■■□□□ 1.74
HERC6-204ENST00000502870 SLC27A3Q5K4L6 730 aa25.93■■□□□ 1.74
HERC6-204ENST00000502870 KTN1Q86UP2 1357 aaKnown RBP25.93■■□□□ 1.74
HERC6-204ENST00000502870 LTN1O94822 1766 aa25.92■■□□□ 1.74
HERC6-204ENST00000502870 SHANK3Q9BYB0 1731 aa25.91■■□□□ 1.74
HERC6-204ENST00000502870 AKT1S1Q96B36 256 aa25.91■■□□□ 1.74
HERC6-204ENST00000502870 LRRC4BQ9NT99 713 aa25.91■■□□□ 1.74
HERC6-204ENST00000502870 MON2Q7Z3U7 1717 aa25.91■■□□□ 1.74
HERC6-204ENST00000502870 GOLGB1Q14789 3259 aaKnown RBP25.9■■□□□ 1.74
HERC6-204ENST00000502870 USP54Q70EL1 1684 aa25.9■■□□□ 1.74
HERC6-204ENST00000502870 GRIN3BO60391 1043 aa25.89■■□□□ 1.74
HERC6-204ENST00000502870 TFCP2L1Q9NZI6 479 aa25.88■■□□□ 1.73
HERC6-204ENST00000502870 TUBGCP6Q96RT7 1819 aa25.87■■□□□ 1.73
HERC6-204ENST00000502870 PNPLA7Q6ZV29 1317 aa25.87■■□□□ 1.73
HERC6-204ENST00000502870 USP31Q70CQ4 1352 aa25.85■■□□□ 1.73
HERC6-204ENST00000502870 FAM208AQ9UK61 1670 aaKnown RBP25.83■■□□□ 1.73
HERC6-204ENST00000502870 NLGN2Q8NFZ4 835 aa25.83■■□□□ 1.73
HERC6-204ENST00000502870 ANKRD24Q8TF21 1146 aa25.83■■□□□ 1.73
HERC6-204ENST00000502870 LY75O60449 1722 aa25.81■■□□□ 1.72
HERC6-204ENST00000502870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.81■■□□□ 1.72
HERC6-204ENST00000502870 DDX54Q8TDD1 881 aaKnown RBP25.78■■□□□ 1.72
HERC6-204ENST00000502870 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
HERC6-204ENST00000502870 DOT1LQ8TEK3 1739 aa25.77■■□□□ 1.72
HERC6-204ENST00000502870 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
HERC6-204ENST00000502870 ATP10DQ9P241 1426 aa25.77■■□□□ 1.72
HERC6-204ENST00000502870 YBX3P16989 372 aaKnown RBP eCLIP25.76■■□□□ 1.71
HERC6-204ENST00000502870 ANKRD36BQ8N2N9 1353 aa25.76■■□□□ 1.71
HERC6-204ENST00000502870 MSH5O43196 834 aa25.75■■□□□ 1.71
HERC6-204ENST00000502870 NME9Q86XW9 330 aa25.75■■□□□ 1.71
HERC6-204ENST00000502870 GPBP1L1Q9HC44 474 aaPredicted RBP25.75■■□□□ 1.71
HERC6-204ENST00000502870 HMGB2P26583 209 aaKnown RBP25.73■■□□□ 1.71
HERC6-204ENST00000502870 SBNO2Q9Y2G9 1366 aa25.72■■□□□ 1.71
HERC6-204ENST00000502870 PRIM1P49642 420 aaKnown RBP25.72■■□□□ 1.71
HERC6-204ENST00000502870 HDGFL2Q7Z4V5 671 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms