RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 C16orf71Q8IYS4 520 aaPredicted RBP7.45□□□□□ -1.22
HTT-202ENST00000502820 SYTL4Q96C24 671 aaPredicted RBP7.45□□□□□ -1.22
HTT-202ENST00000502820 NUDT16Q96DE0 195 aaKnown RBP7.45□□□□□ -1.22
HTT-202ENST00000502820 KDM2AQ9Y2K7 1162 aa7.45□□□□□ -1.22
HTT-202ENST00000502820 ANKARQ7Z5J8 1434 aa7.44□□□□□ -1.22
HTT-202ENST00000502820 C14orf93Q9H972 538 aaKnown RBP7.44□□□□□ -1.22
HTT-202ENST00000502820 ACEP12821 1306 aa7.44□□□□□ -1.22
HTT-202ENST00000502820 ANKRD30BQ9BXX2 1392 aa7.44□□□□□ -1.22
HTT-202ENST00000502820 CRB1P82279 1406 aa7.44□□□□□ -1.22
HTT-202ENST00000502820 CASZ1Q86V15 1759 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 KIF1BO60333 1816 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 NLRP6P59044 892 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 DNAJC5GQ8N7S2 189 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 SHANK3Q9BYB0 1731 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
HTT-202ENST00000502820 MAP3K5Q99683 1374 aa7.43□□□□□ -1.22
HTT-202ENST00000502820 GOLGB1Q14789 3259 aaKnown RBP7.42□□□□□ -1.22
HTT-202ENST00000502820 RGPD8O14715 1765 aaPredicted RBP7.42□□□□□ -1.22
HTT-202ENST00000502820 KIF3CO14782 793 aa7.42□□□□□ -1.22
HTT-202ENST00000502820 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
HTT-202ENST00000502820 TOMM70O94826 608 aa7.41□□□□□ -1.22
HTT-202ENST00000502820 SLC16A10Q8TF71 515 aa7.41□□□□□ -1.22
HTT-202ENST00000502820 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
HTT-202ENST00000502820 CDCA7Q9BWT1 371 aaPredicted RBP7.41□□□□□ -1.22
HTT-202ENST00000502820 CDK19Q9BWU1 502 aa7.41□□□□□ -1.22
HTT-202ENST00000502820 PNPLA7Q6ZV29 1317 aa7.41□□□□□ -1.22
HTT-202ENST00000502820 SLC34A2O95436 690 aa7.4□□□□□ -1.22
HTT-202ENST00000502820 SRPK2P78362 688 aaKnown RBP7.4□□□□□ -1.22
HTT-202ENST00000502820 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.22
HTT-202ENST00000502820 AXIN2Q9Y2T1 843 aa7.4□□□□□ -1.22
HTT-202ENST00000502820 PIK3C2GO75747 1445 aa7.4□□□□□ -1.22
HTT-202ENST00000502820 COL5A2P05997 1499 aaPredicted RBP7.4□□□□□ -1.22
HTT-202ENST00000502820 CHD4Q14839 1912 aa7.4□□□□□ -1.23
HTT-202ENST00000502820 IFT172Q9UG01 1749 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 ATP7BP35670 1465 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 BRD4O60885 1362 aaPredicted RBP7.39□□□□□ -1.23
HTT-202ENST00000502820 AKT1S1Q96B36 256 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 MPHOSPH9Q99550 1183 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 NMRK2Q9NPI5 230 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 NLRP2Q9NX02 1062 aa7.39□□□□□ -1.23
HTT-202ENST00000502820 USP6P35125 1406 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 SPATA31E1Q6ZUB1 1445 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 CPDO75976 1380 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 WDR17Q8IZU2 1322 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 HSPA1AP0DMV8 641 aaKnown RBP7.38□□□□□ -1.23
HTT-202ENST00000502820 HSPA1BP0DMV9 641 aaKnown RBP7.38□□□□□ -1.23
HTT-202ENST00000502820 CCDC61Q9Y6R9 512 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 TRPM3Q9HCF6 1732 aaPredicted RBP7.38□□□□□ -1.23
HTT-202ENST00000502820 ALS2Q96Q42 1657 aa7.38□□□□□ -1.23
HTT-202ENST00000502820 IGSF1Q8N6C5 1336 aa7.37□□□□□ -1.23
HTT-202ENST00000502820 ARHGAP27Q6ZUM4 889 aa7.37□□□□□ -1.23
HTT-202ENST00000502820 COL23A1Q86Y22 540 aaPredicted RBP7.37□□□□□ -1.23
HTT-202ENST00000502820 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
HTT-202ENST00000502820 PPLO60437 1756 aa7.37□□□□□ -1.23
HTT-202ENST00000502820 TULP4Q9NRJ4 1543 aa7.37□□□□□ -1.23
HTT-202ENST00000502820 RAB3GAP2Q9H2M9 1393 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 PHF14O94880 888 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 SLC27A3Q5K4L6 730 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
HTT-202ENST00000502820 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
HTT-202ENST00000502820 AATKQ6ZMQ8 1374 aa7.35□□□□□ -1.23
HTT-202ENST00000502820 USP19O94966 1318 aa7.35□□□□□ -1.23
HTT-202ENST00000502820 PRIM1P49642 420 aaKnown RBP7.35□□□□□ -1.23
HTT-202ENST00000502820 PHRF1Q9P1Y6 1649 aaKnown RBP7.34□□□□□ -1.23
HTT-202ENST00000502820 IL2RBP14784 551 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 FAM161AQ3B820 660 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 SMIM5Q71RC9 77 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 LTV1Q96GA3 475 aaPredicted RBP7.34□□□□□ -1.23
HTT-202ENST00000502820 RRAGCQ9HB90 399 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 CABP1Q9NZU7 370 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 KNDC1Q76NI1 1749 aa7.34□□□□□ -1.23
HTT-202ENST00000502820 LRRC37A3O60309 1634 aa7.34□□□□□ -1.24
HTT-202ENST00000502820 ADCY9O60503 1353 aa7.33□□□□□ -1.24
HTT-202ENST00000502820 PARP4Q9UKK3 1724 aaKnown RBP7.33□□□□□ -1.24
HTT-202ENST00000502820 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
HTT-202ENST00000502820 CFAP44Q96MT7 982 aa7.33□□□□□ -1.24
HTT-202ENST00000502820 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
HTT-202ENST00000502820 PEAK1Q9H792 1746 aa7.32□□□□□ -1.24
HTT-202ENST00000502820 PLEKHG3A1L390 1219 aa7.32□□□□□ -1.24
HTT-202ENST00000502820 KCNH5Q8NCM2 988 aa7.32□□□□□ -1.24
HTT-202ENST00000502820 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
HTT-202ENST00000502820 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
HTT-202ENST00000502820 TOPAZ1Q8N9V7 1692 aa7.32□□□□□ -1.24
HTT-202ENST00000502820 BCL9O00512 1426 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 FCHSD2O94868 740 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 FSTL1Q12841 308 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 C9orf131Q5VYM1 1079 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 PPIP5K1Q6PFW1 1433 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 ARHGEF25Q86VW2 580 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 AK7Q96M32 723 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 PCDH10Q9P2E7 1040 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 CCDC7Q96M83 1385 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 RGPD3A6NKT7 1758 aaPredicted RBP7.31□□□□□ -1.24
HTT-202ENST00000502820 RGPD4Q7Z3J3 1758 aa7.31□□□□□ -1.24
HTT-202ENST00000502820 CRYBG1Q9Y4K1 1723 aa7.3□□□□□ -1.24
HTT-202ENST00000502820 TNS2Q63HR2 1409 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms