RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-204ENST00000502639 GMPR2Q9P2T1 348 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-204ENST00000502639 GLMNQ92990 594 aa8.71□□□□□ -1.02
CDC42SE2-204ENST00000502639 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
CDC42SE2-204ENST00000502639 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDC42SE2-204ENST00000502639 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
CDC42SE2-204ENST00000502639 FAM174AQ8TBP5 190 aa8.7□□□□□ -1.02
CDC42SE2-204ENST00000502639 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
CDC42SE2-204ENST00000502639 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
CDC42SE2-204ENST00000502639 AVPP01185 164 aa8.69□□□□□ -1.02
CDC42SE2-204ENST00000502639 GRM5P41594 1212 aa8.69□□□□□ -1.02
CDC42SE2-204ENST00000502639 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
CDC42SE2-204ENST00000502639 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
CDC42SE2-204ENST00000502639 WFS1O76024 890 aa8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 PHTF2Q8N3S3 785 aa8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
CDC42SE2-204ENST00000502639 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 SOX11P35716 441 aa8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 MPNDQ8N594 471 aa8.67□□□□□ -1.02
CDC42SE2-204ENST00000502639 ESPNB1AK53 854 aa8.66□□□□□ -1.02
CDC42SE2-204ENST00000502639 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
CDC42SE2-204ENST00000502639 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
CDC42SE2-204ENST00000502639 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
CDC42SE2-204ENST00000502639 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE2-204ENST00000502639 J3QL48 77 aa8.65□□□□□ -1.02
CDC42SE2-204ENST00000502639 AXIN1O15169 862 aa8.65□□□□□ -1.02
CDC42SE2-204ENST00000502639 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
CDC42SE2-204ENST00000502639 KCTD15Q96SI1 283 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE2-204ENST00000502639 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE2-204ENST00000502639 VASH1Q7L8A9 365 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE2-204ENST00000502639 SNIP1Q8TAD8 396 aaKnown RBP8.64□□□□□ -1.03
CDC42SE2-204ENST00000502639 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 NR3C2P08235 984 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 SMPD1P17405 629 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
CDC42SE2-204ENST00000502639 ADH1CP00326 375 aa8.62□□□□□ -1.03
CDC42SE2-204ENST00000502639 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-204ENST00000502639 FSHRP23945 695 aa8.61□□□□□ -1.03
CDC42SE2-204ENST00000502639 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-204ENST00000502639 CDV3Q9UKY7 258 aaKnown RBP8.61□□□□□ -1.03
CDC42SE2-204ENST00000502639 WIPF1O43516 503 aa8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 RAB15P59190 212 aa8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 NBPF20Q3BBV1 942 aa8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
CDC42SE2-204ENST00000502639 TTC24A2A3L6 582 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-204ENST00000502639 NR5A1Q13285 461 aa8.58□□□□□ -1.04
CDC42SE2-204ENST00000502639 SLFNL1Q499Z3 407 aa8.58□□□□□ -1.04
CDC42SE2-204ENST00000502639 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
CDC42SE2-204ENST00000502639 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
CDC42SE2-204ENST00000502639 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
CDC42SE2-204ENST00000502639 NNTQ13423 1086 aa8.57□□□□□ -1.04
CDC42SE2-204ENST00000502639 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
CDC42SE2-204ENST00000502639 NFATC2IPQ8NCF5 419 aa8.57□□□□□ -1.04
CDC42SE2-204ENST00000502639 HPS1Q92902 700 aa8.57□□□□□ -1.04
CDC42SE2-204ENST00000502639 ATP9BO43861 1147 aa8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 SKIP12755 728 aa8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 PPP1R26Q5T8A7 1209 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 PLPP7Q8NBV4 271 aa8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 SERPINA10Q9UK55 444 aa8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 MAFBQ9Y5Q3 323 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-204ENST00000502639 SCTRP47872 440 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 SRPK2P78362 688 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 ARID3AQ99856 593 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
CDC42SE2-204ENST00000502639 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
CDC42SE2-204ENST00000502639 LILRA1O75019 489 aa8.54□□□□□ -1.04
CDC42SE2-204ENST00000502639 RNF20Q5VTR2 975 aa8.54□□□□□ -1.04
CDC42SE2-204ENST00000502639 CCDC97Q96F63 343 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-204ENST00000502639 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 ADD1P35611 737 aaKnown RBP8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 ZNF784Q8NCA9 323 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 ITPKCQ96DU7 683 aa8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 DOLKQ9UPQ8 538 aa8.53□□□□□ -1.04
CDC42SE2-204ENST00000502639 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
CDC42SE2-204ENST00000502639 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms