RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 COG3Q96JB2 828 aa35.6■■■■□ 3.29
PROM1-202ENST00000502501 THRAP3Q9Y2W1 955 aaKnown RBP35.6■■■■□ 3.29
PROM1-202ENST00000502501 LARP1Q6PKG0 1096 aaKnown RBP35.59■■■■□ 3.29
PROM1-202ENST00000502501 NSD3Q9BZ95 1437 aa35.58■■■■□ 3.29
PROM1-202ENST00000502501 FYB1O15117 783 aa35.58■■■■□ 3.29
PROM1-202ENST00000502501 FAM98CQ17RN3 349 aaKnown RBP35.58■■■■□ 3.29
PROM1-202ENST00000502501 WDR17Q8IZU2 1322 aa35.57■■■■□ 3.29
PROM1-202ENST00000502501 CARD14Q9BXL6 1004 aa35.57■■■■□ 3.28
PROM1-202ENST00000502501 AXIN2Q9Y2T1 843 aa35.57■■■■□ 3.28
PROM1-202ENST00000502501 RGPD5Q99666 1765 aa35.56■■■■□ 3.28
PROM1-202ENST00000502501 SOX12O15370 315 aa35.55■■■■□ 3.28
PROM1-202ENST00000502501 BLMP54132 1417 aaPredicted RBP35.55■■■■□ 3.28
PROM1-202ENST00000502501 TCP11L2Q8N4U5 519 aa35.54■■■■□ 3.28
PROM1-202ENST00000502501 PARP4Q9UKK3 1724 aaKnown RBP35.52■■■■□ 3.28
PROM1-202ENST00000502501 ZBTB7CA1YPR0 619 aa35.51■■■■□ 3.28
PROM1-202ENST00000502501 KRT27Q7Z3Y8 459 aa35.51■■■■□ 3.28
PROM1-202ENST00000502501 WNK3Q9BYP7 1800 aa35.5■■■■□ 3.27
PROM1-202ENST00000502501 C11orf95C9JLR9 678 aaPredicted RBP35.49■■■■□ 3.27
PROM1-202ENST00000502501 RTL1A6NKG5 1358 aa35.49■■■■□ 3.27
PROM1-202ENST00000502501 FAM208AQ9UK61 1670 aaKnown RBP35.48■■■■□ 3.27
PROM1-202ENST00000502501 ERBB3P21860 1342 aa35.48■■■■□ 3.27
PROM1-202ENST00000502501 CGNL1Q0VF96 1302 aa35.48■■■■□ 3.27
PROM1-202ENST00000502501 CCDC125Q86Z20 511 aa35.47■■■■□ 3.27
PROM1-202ENST00000502501 ANKRD26Q9UPS8 1709 aa35.46■■■■□ 3.27
PROM1-202ENST00000502501 GGNBP2Q9H3C7 697 aa35.46■■■■□ 3.27
PROM1-202ENST00000502501 KIF24Q5T7B8 1368 aa35.46■■■■□ 3.27
PROM1-202ENST00000502501 CARD10Q9BWT7 1032 aa35.45■■■■□ 3.27
PROM1-202ENST00000502501 CCDC7Q96M83 1385 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 KIF7Q2M1P5 1343 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 A0A0G2JS52 829 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 MYT1Q01538 1121 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 TOM1L2Q6ZVM7 507 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 IP6K1Q92551 441 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 USP35Q9P2H5 1018 aa35.44■■■■□ 3.26
PROM1-202ENST00000502501 MAP3K19Q56UN5 1328 aa35.43■■■■□ 3.26
PROM1-202ENST00000502501 POLR3GLQ9BT43 218 aa35.43■■■■□ 3.26
PROM1-202ENST00000502501 CDCA7Q9BWT1 371 aaPredicted RBP35.42■■■■□ 3.26
PROM1-202ENST00000502501 NSD2O96028 1365 aa35.41■■■■□ 3.26
PROM1-202ENST00000502501 LRRC37A3O60309 1634 aa35.4■■■■□ 3.26
PROM1-202ENST00000502501 DISP2A7MBM2 1401 aa35.4■■■■□ 3.26
PROM1-202ENST00000502501 PANK3Q9H999 370 aa35.38■■■■□ 3.25
PROM1-202ENST00000502501 CSB-PGBD3P0DP91 1061 aa35.37■■■■□ 3.25
PROM1-202ENST00000502501 HOXC9P31274 260 aa35.35■■■■□ 3.25
PROM1-202ENST00000502501 ANKRD24Q8TF21 1146 aa35.34■■■■□ 3.25
PROM1-202ENST00000502501 FLT4P35916 1363 aa35.32■■■■□ 3.24
PROM1-202ENST00000502501 RGPD1P0DJD0 1748 aa35.32■■■■□ 3.24
PROM1-202ENST00000502501 PEAK1Q9H792 1746 aa35.32■■■■□ 3.24
PROM1-202ENST00000502501 AMPHP49418 695 aa35.31■■■■□ 3.24
PROM1-202ENST00000502501 PDE3BQ13370 1112 aa35.29■■■■□ 3.24
PROM1-202ENST00000502501 INSRP06213 1382 aa35.28■■■■□ 3.24
PROM1-202ENST00000502501 RRS1Q15050 365 aaKnown RBP35.28■■■■□ 3.24
PROM1-202ENST00000502501 FAM196AQ6ZSG2 479 aa35.28■■■■□ 3.24
PROM1-202ENST00000502501 FBLN1P23142 703 aa35.27■■■■□ 3.24
PROM1-202ENST00000502501 BCL9O00512 1426 aa35.26■■■■□ 3.24
PROM1-202ENST00000502501 WASHC2AQ641Q2 1341 aa35.26■■■■□ 3.23
PROM1-202ENST00000502501 TNS2Q63HR2 1409 aa35.25■■■■□ 3.23
PROM1-202ENST00000502501 SMG6Q86US8 1419 aaKnown RBP35.25■■■■□ 3.23
PROM1-202ENST00000502501 DDB1Q16531 1140 aa35.25■■■■□ 3.23
PROM1-202ENST00000502501 NLRP2Q9NX02 1062 aa35.25■■■■□ 3.23
PROM1-202ENST00000502501 OVOS2A0A0G2JMS6 1433 aa35.24■■■■□ 3.23
PROM1-202ENST00000502501 TNS1Q9HBL0 1735 aaKnown RBP35.23■■■■□ 3.23
PROM1-202ENST00000502501 KNSTRNQ9Y448 316 aa35.23■■■■□ 3.23
PROM1-202ENST00000502501 MAP2P11137 1827 aaKnown RBP35.22■■■■□ 3.23
PROM1-202ENST00000502501 IL2RBP14784 551 aa35.18■■■■□ 3.22
PROM1-202ENST00000502501 SF3B2Q13435 895 aaKnown RBP35.18■■■■□ 3.22
PROM1-202ENST00000502501 AMER1Q5JTC6 1135 aaPredicted RBP35.18■■■■□ 3.22
PROM1-202ENST00000502501 PER1O15534 1290 aaPredicted RBP35.17■■■■□ 3.22
PROM1-202ENST00000502501 NPC1L1Q9UHC9 1359 aa35.16■■■■□ 3.22
PROM1-202ENST00000502501 HSP90AB2PQ58FF8 381 aa35.16■■■■□ 3.22
PROM1-202ENST00000502501 FAM182BQ5T319 152 aa35.16■■■■□ 3.22
PROM1-202ENST00000502501 EMILIN1Q9Y6C2 1016 aa35.16■■■■□ 3.22
PROM1-202ENST00000502501 RGPD2P0DJD1 1756 aa35.15■■■■□ 3.22
PROM1-202ENST00000502501 POLKQ9UBT6 870 aa35.15■■■■□ 3.22
PROM1-202ENST00000502501 NCAPD2Q15021 1401 aa35.15■■■■□ 3.22
PROM1-202ENST00000502501 EXOC5O00471 708 aa35.13■■■■□ 3.21
PROM1-202ENST00000502501 LTV1Q96GA3 475 aaPredicted RBP35.13■■■■□ 3.21
PROM1-202ENST00000502501 SBF2Q86WG5 1849 aa35.11■■■■□ 3.21
PROM1-202ENST00000502501 MARCH10Q8NA82 808 aaPredicted RBP35.1■■■■□ 3.21
PROM1-202ENST00000502501 BAG6P46379 1132 aa35.09■■■■□ 3.21
PROM1-202ENST00000502501 NBPF6Q5VWK0 638 aa35.08■■■■□ 3.21
PROM1-202ENST00000502501 MORC1Q86VD1 984 aa35.08■■■■□ 3.21
PROM1-202ENST00000502501 NBPF4Q96M43 638 aa35.08■■■■□ 3.21
PROM1-202ENST00000502501 PARD3Q8TEW0 1356 aa35.08■■■■□ 3.21
PROM1-202ENST00000502501 RGPD3A6NKT7 1758 aaPredicted RBP35.07■■■■□ 3.2
PROM1-202ENST00000502501 RGPD4Q7Z3J3 1758 aa35.07■■■■□ 3.2
PROM1-202ENST00000502501 MEGF6O75095 1541 aa35.06■■■■□ 3.2
PROM1-202ENST00000502501 PLEKHG2Q9H7P9 1386 aa35.04■■■■□ 3.2
PROM1-202ENST00000502501 TRIM37O94972 964 aa35.04■■■■□ 3.2
PROM1-202ENST00000502501 DEFB132Q7Z7B7 95 aa35.03■■■■□ 3.2
PROM1-202ENST00000502501 SHANK3Q9BYB0 1731 aa35.03■■■■□ 3.2
PROM1-202ENST00000502501 PPM1GO15355 546 aaPredicted RBP35.02■■■■□ 3.2
PROM1-202ENST00000502501 TNNT2P45379 298 aaPredicted RBP35.01■■■■□ 3.2
PROM1-202ENST00000502501 NHSQ6T4R5 1651 aa35■■■■□ 3.19
PROM1-202ENST00000502501 BCL11BQ9C0K0 894 aaPredicted RBP34.97■■■■□ 3.19
PROM1-202ENST00000502501 RREB1Q92766 1687 aa34.96■■■■□ 3.19
PROM1-202ENST00000502501 PKD1L3Q7Z443 1732 aa34.96■■■■□ 3.19
PROM1-202ENST00000502501 RAPGEF4Q8WZA2 1011 aa34.96■■■■□ 3.19
PROM1-202ENST00000502501 ZEB1P37275 1124 aaPredicted RBP34.94■■■■□ 3.18
PROM1-202ENST00000502501 EIF4A2Q14240 407 aaKnown RBP34.94■■■■□ 3.18
PROM1-202ENST00000502501 CAMKK2Q96RR4 588 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms