RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FAM83GA6ND36 823 aa6.46□□□□□ -1.37
MATR3-202ENST00000502422 PHF8Q9UPP1 1060 aa6.46□□□□□ -1.37
MATR3-202ENST00000502422 PLCH1Q4KWH8 1693 aa6.46□□□□□ -1.38
MATR3-202ENST00000502422 TNS3Q68CZ2 1445 aa6.46□□□□□ -1.38
MATR3-202ENST00000502422 YTHDC1Q96MU7 727 aaKnown RBP6.46□□□□□ -1.38
MATR3-202ENST00000502422 KIF1AQ12756 1690 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 C11orf95C9JLR9 678 aaPredicted RBP6.45□□□□□ -1.38
MATR3-202ENST00000502422 NBPF8Q3BBV2 869 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 RGL3Q3MIN7 710 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 NBPF14Q5TI25 921 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 ARHGEF10O15013 1369 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 TRIM37O94972 964 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 APBA3O96018 575 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 TMEM132EQ6IEE7 984 aa6.45□□□□□ -1.38
MATR3-202ENST00000502422 ZNF579Q8NAF0 562 aaKnown RBP6.45□□□□□ -1.38
MATR3-202ENST00000502422 BCL11BQ9C0K0 894 aaPredicted RBP6.45□□□□□ -1.38
MATR3-202ENST00000502422 STK24Q9Y6E0 443 aa6.44□□□□□ -1.38
MATR3-202ENST00000502422 PPLO60437 1756 aa6.44□□□□□ -1.38
MATR3-202ENST00000502422 GTPBP6O43824 516 aaPredicted RBP6.43□□□□□ -1.38
MATR3-202ENST00000502422 FAM196AQ6ZSG2 479 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 PMFBP1Q8TBY8 1022 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
MATR3-202ENST00000502422 PCDHB8Q9UN66 801 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 PCDHB13Q9Y5F0 798 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 ADGRF5Q8IZF2 1346 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 SBNO1A3KN83 1393 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 RGPD8O14715 1765 aaPredicted RBP6.43□□□□□ -1.38
MATR3-202ENST00000502422 FMN2Q9NZ56 1722 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 ABCC11Q96J66 1382 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 PLEKHH1Q9ULM0 1364 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 CAMKK2Q96RR4 588 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 SPON1Q9HCB6 807 aa6.43□□□□□ -1.38
MATR3-202ENST00000502422 SUPT16HQ9Y5B9 1047 aaKnown RBP6.43□□□□□ -1.38
MATR3-202ENST00000502422 SAFB2Q14151 953 aaKnown RBP eCLIP6.42□□□□□ -1.38
MATR3-202ENST00000502422 FAM163AQ96GL9 167 aaPredicted RBP6.42□□□□□ -1.38
MATR3-202ENST00000502422 TECPR2O15040 1411 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 SPATA31A5Q5VU36 1347 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 SPATA31A7Q8IWB4 1347 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 ZNF316A6NFI3 1004 aaPredicted RBP6.42□□□□□ -1.38
MATR3-202ENST00000502422 PAK3O75914 559 aaPredicted RBP6.42□□□□□ -1.38
MATR3-202ENST00000502422 PDE3BQ13370 1112 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 PRDM11Q9NQV5 511 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 USP35Q9P2H5 1018 aa6.42□□□□□ -1.38
MATR3-202ENST00000502422 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
MATR3-202ENST00000502422 GPRASP1Q5JY77 1395 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 POTEB2H3BUK9 544 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 KCNQ2O43526 872 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 ZNF467Q7Z7K2 595 aaPredicted RBP6.41□□□□□ -1.38
MATR3-202ENST00000502422 CDAN1Q8IWY9 1227 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 STRN4Q9NRL3 753 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 POGKQ9P215 609 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 NRXN1Q9ULB1 1477 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 EVA1CP58658 441 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 SIRT1Q96EB6 747 aa6.41□□□□□ -1.38
MATR3-202ENST00000502422 RGPD3A6NKT7 1758 aaPredicted RBP6.4□□□□□ -1.38
MATR3-202ENST00000502422 COL14A1Q05707 1796 aaKnown RBP6.4□□□□□ -1.38
MATR3-202ENST00000502422 RGPD4Q7Z3J3 1758 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 ABCA3Q99758 1704 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 YTHDC2Q9H6S0 1430 aaKnown RBP6.4□□□□□ -1.38
MATR3-202ENST00000502422 MAP3K5Q99683 1374 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 ANKRD30BQ9BXX2 1392 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 KNDC1Q76NI1 1749 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 NRAPQ86VF7 1730 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 TNS1Q9HBL0 1735 aaKnown RBP6.4□□□□□ -1.38
MATR3-202ENST00000502422 IFT172Q9UG01 1749 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 CHD4Q14839 1912 aa6.4□□□□□ -1.38
MATR3-202ENST00000502422 DHX57Q6P158 1386 aaKnown RBP6.4□□□□□ -1.39
MATR3-202ENST00000502422 ZNF784Q8NCA9 323 aaPredicted RBP6.39□□□□□ -1.39
MATR3-202ENST00000502422 NGDNQ8NEJ9 315 aaKnown RBP6.39□□□□□ -1.39
MATR3-202ENST00000502422 PRAM1Q96QH2 718 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 SPATA31A1Q5TZJ5 1347 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 UTRNP46939 3433 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 MAP3K13O43283 966 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 IFNL1Q8IU54 200 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 KIF12Q96FN5 646 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 RREB1Q92766 1687 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 CLSPNQ9HAW4 1339 aa6.39□□□□□ -1.39
MATR3-202ENST00000502422 PRELPP51888 382 aa6.38□□□□□ -1.39
MATR3-202ENST00000502422 PDAP1Q13442 181 aaKnown RBP6.38□□□□□ -1.39
MATR3-202ENST00000502422 CHRNA2Q15822 529 aa6.38□□□□□ -1.39
MATR3-202ENST00000502422 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
MATR3-202ENST00000502422 SCUBE2Q9NQ36 999 aa6.38□□□□□ -1.39
MATR3-202ENST00000502422 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 GIGYF1O75420 1035 aaPredicted RBP6.37□□□□□ -1.39
MATR3-202ENST00000502422 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
MATR3-202ENST00000502422 CFAP70Q5T0N1 1121 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 C14orf93Q9H972 538 aaKnown RBP6.37□□□□□ -1.39
MATR3-202ENST00000502422 PIK3C2GO75747 1445 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 ANKARQ7Z5J8 1434 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 PSEN1P49768 467 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
MATR3-202ENST00000502422 KIAA0232Q92628 1395 aa6.37□□□□□ -1.39
MATR3-202ENST00000502422 DLC1Q96QB1 1528 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 PODXL2Q9NZ53 605 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 EIF3AQ14152 1382 aaKnown RBP6.36□□□□□ -1.39
MATR3-202ENST00000502422 TCP11L2Q8N4U5 519 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 PHF12Q96QT6 1004 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 TRAK1Q9UPV9 953 aa6.36□□□□□ -1.39
MATR3-202ENST00000502422 NUP188Q5SRE5 1749 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms