RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 WDR17Q8IZU2 1322 aa27.84■■■□□ 2.05
SFXN1-203ENST00000502393 USP31Q70CQ4 1352 aa27.84■■■□□ 2.05
SFXN1-203ENST00000502393 PARP4Q9UKK3 1724 aaKnown RBP27.84■■■□□ 2.05
SFXN1-203ENST00000502393 NFAT5O94916 1531 aa27.83■■■□□ 2.05
SFXN1-203ENST00000502393 ST20-MTHFSA0A0A6YYL1 179 aa27.83■■■□□ 2.05
SFXN1-203ENST00000502393 TESK2Q96S53 571 aa27.83■■■□□ 2.05
SFXN1-203ENST00000502393 TERF2IPQ9NYB0 399 aa27.83■■■□□ 2.05
SFXN1-203ENST00000502393 C11orf95C9JLR9 678 aaPredicted RBP27.81■■■□□ 2.04
SFXN1-203ENST00000502393 EDC4Q6P2E9 1401 aaKnown RBP27.8■■■□□ 2.04
SFXN1-203ENST00000502393 USP54Q70EL1 1684 aa27.79■■■□□ 2.04
SFXN1-203ENST00000502393 ABCC6O95255 1503 aa27.79■■■□□ 2.04
SFXN1-203ENST00000502393 NINLQ9Y2I6 1382 aa27.79■■■□□ 2.04
SFXN1-203ENST00000502393 NME9Q86XW9 330 aa27.79■■■□□ 2.04
SFXN1-203ENST00000502393 A0A1W2PP64 1363 aa27.78■■■□□ 2.04
SFXN1-203ENST00000502393 APBA3O96018 575 aa27.78■■■□□ 2.04
SFXN1-203ENST00000502393 EZH2Q15910 746 aaKnown RBP27.78■■■□□ 2.04
SFXN1-203ENST00000502393 CAMKK2Q96RR4 588 aa27.78■■■□□ 2.04
SFXN1-203ENST00000502393 CSB-PGBD3P0DP91 1061 aa27.77■■■□□ 2.04
SFXN1-203ENST00000502393 CDCA7Q9BWT1 371 aaPredicted RBP27.77■■■□□ 2.04
SFXN1-203ENST00000502393 PARD3Q8TEW0 1356 aa27.76■■■□□ 2.03
SFXN1-203ENST00000502393 DDB1Q16531 1140 aa27.76■■■□□ 2.03
SFXN1-203ENST00000502393 CARD10Q9BWT7 1032 aa27.76■■■□□ 2.03
SFXN1-203ENST00000502393 RGPD5Q99666 1765 aa27.74■■■□□ 2.03
SFXN1-203ENST00000502393 PSDA5PKW4 1024 aaPredicted RBP27.73■■■□□ 2.03
SFXN1-203ENST00000502393 LRRC37A3O60309 1634 aa27.73■■■□□ 2.03
SFXN1-203ENST00000502393 OVOS2A0A0G2JMS6 1433 aa27.73■■■□□ 2.03
SFXN1-203ENST00000502393 OVOS2A0A0J9YW53 1432 aa27.73■■■□□ 2.03
SFXN1-203ENST00000502393 OVOS2Q6IE36 1432 aa27.73■■■□□ 2.03
SFXN1-203ENST00000502393 TIMELESSQ9UNS1 1208 aa27.71■■■□□ 2.03
SFXN1-203ENST00000502393 USP47Q96K76 1375 aa27.7■■■□□ 2.02
SFXN1-203ENST00000502393 CCDC7Q96M83 1385 aa27.7■■■□□ 2.02
SFXN1-203ENST00000502393 PEAK1Q9H792 1746 aa27.7■■■□□ 2.02
SFXN1-203ENST00000502393 WNK3Q9BYP7 1800 aa27.69■■■□□ 2.02
SFXN1-203ENST00000502393 CLSPNQ9HAW4 1339 aa27.68■■■□□ 2.02
SFXN1-203ENST00000502393 TMF1P82094 1093 aa27.68■■■□□ 2.02
SFXN1-203ENST00000502393 R3HDM1Q15032 1099 aaKnown RBP27.67■■■□□ 2.02
SFXN1-203ENST00000502393 ERBB3P21860 1342 aa27.67■■■□□ 2.02
SFXN1-203ENST00000502393 LTN1O94822 1766 aa27.65■■■□□ 2.02
SFXN1-203ENST00000502393 MARCH10Q8NA82 808 aaPredicted RBP27.65■■■□□ 2.02
SFXN1-203ENST00000502393 LRP5O75197 1615 aa27.65■■■□□ 2.02
SFXN1-203ENST00000502393 ANKRD36BQ8N2N9 1353 aa27.64■■■□□ 2.02
SFXN1-203ENST00000502393 EXOC5O00471 708 aa27.64■■■□□ 2.02
SFXN1-203ENST00000502393 BCL9O00512 1426 aa27.64■■■□□ 2.02
SFXN1-203ENST00000502393 RREB1Q92766 1687 aa27.62■■■□□ 2.01
SFXN1-203ENST00000502393 COG3Q96JB2 828 aa27.62■■■□□ 2.01
SFXN1-203ENST00000502393 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
SFXN1-203ENST00000502393 NLRP2Q9NX02 1062 aa27.62■■■□□ 2.01
SFXN1-203ENST00000502393 CDCA8Q53HL2 280 aa27.61■■■□□ 2.01
SFXN1-203ENST00000502393 ANKRD24Q8TF21 1146 aa27.61■■■□□ 2.01
SFXN1-203ENST00000502393 BCL11BQ9C0K0 894 aaPredicted RBP27.61■■■□□ 2.01
SFXN1-203ENST00000502393 PLSCR1O15162 318 aa27.6■■■□□ 2.01
SFXN1-203ENST00000502393 NBPF14Q5TI25 921 aa27.6■■■□□ 2.01
SFXN1-203ENST00000502393 SBF2Q86WG5 1849 aa27.6■■■□□ 2.01
SFXN1-203ENST00000502393 IP6K1Q92551 441 aa27.59■■■□□ 2.01
SFXN1-203ENST00000502393 NUP188Q5SRE5 1749 aa27.58■■■□□ 2.01
SFXN1-203ENST00000502393 TNS2Q63HR2 1409 aa27.58■■■□□ 2
SFXN1-203ENST00000502393 IL2RBP14784 551 aa27.56■■■□□ 2
SFXN1-203ENST00000502393 RGPD3A6NKT7 1758 aaPredicted RBP27.55■■■□□ 2
SFXN1-203ENST00000502393 RGPD4Q7Z3J3 1758 aa27.55■■■□□ 2
SFXN1-203ENST00000502393 MAP3K19Q56UN5 1328 aa27.53■■■□□ 2
SFXN1-203ENST00000502393 PTF1AQ7RTS3 328 aa27.53■■■□□ 2
SFXN1-203ENST00000502393 FYB1O15117 783 aa27.52■■■□□ 2
SFXN1-203ENST00000502393 HOXC9P31274 260 aa27.5■■□□□ 1.99
SFXN1-203ENST00000502393 AMPHP49418 695 aa27.5■■□□□ 1.99
SFXN1-203ENST00000502393 FBLN1P23142 703 aa27.48■■□□□ 1.99
SFXN1-203ENST00000502393 LTV1Q96GA3 475 aaPredicted RBP27.48■■□□□ 1.99
SFXN1-203ENST00000502393 GGNBP2Q9H3C7 697 aa27.48■■□□□ 1.99
SFXN1-203ENST00000502393 FAM208AQ9UK61 1670 aaKnown RBP27.48■■□□□ 1.99
SFXN1-203ENST00000502393 PROM2Q8N271 834 aa27.46■■□□□ 1.99
SFXN1-203ENST00000502393 RTL1A6NKG5 1358 aa27.46■■□□□ 1.99
SFXN1-203ENST00000502393 KCNQ2O43526 872 aa27.44■■□□□ 1.98
SFXN1-203ENST00000502393 RRS1Q15050 365 aaKnown RBP27.43■■□□□ 1.98
SFXN1-203ENST00000502393 NHSQ6T4R5 1651 aa27.42■■□□□ 1.98
SFXN1-203ENST00000502393 TXNRD1Q16881 649 aa27.41■■□□□ 1.98
SFXN1-203ENST00000502393 ACSBG1Q96GR2 724 aa27.41■■□□□ 1.98
SFXN1-203ENST00000502393 CARD14Q9BXL6 1004 aa27.41■■□□□ 1.98
SFXN1-203ENST00000502393 MYOM1P52179 1685 aa27.4■■□□□ 1.98
SFXN1-203ENST00000502393 KIF20BQ96Q89 1820 aa27.39■■□□□ 1.98
SFXN1-203ENST00000502393 CCER1Q8TC90 406 aaPredicted RBP27.39■■□□□ 1.98
SFXN1-203ENST00000502393 ANO8Q9HCE9 1232 aaPredicted RBP27.39■■□□□ 1.98
SFXN1-203ENST00000502393 NSD3Q9BZ95 1437 aa27.38■■□□□ 1.97
SFXN1-203ENST00000502393 DDX54Q8TDD1 881 aaKnown RBP27.37■■□□□ 1.97
SFXN1-203ENST00000502393 KIF24Q5T7B8 1368 aa27.36■■□□□ 1.97
SFXN1-203ENST00000502393 SPON1Q9HCB6 807 aa27.36■■□□□ 1.97
SFXN1-203ENST00000502393 SMG6Q86US8 1419 aaKnown RBP27.35■■□□□ 1.97
SFXN1-203ENST00000502393 EIF4G2P78344 907 aaKnown RBP eCLIP27.34■■□□□ 1.97
SFXN1-203ENST00000502393 NBPF6Q5VWK0 638 aa27.34■■□□□ 1.97
SFXN1-203ENST00000502393 NBPF4Q96M43 638 aa27.34■■□□□ 1.97
SFXN1-203ENST00000502393 INSRP06213 1382 aa27.34■■□□□ 1.97
SFXN1-203ENST00000502393 FLT4P35916 1363 aa27.34■■□□□ 1.97
SFXN1-203ENST00000502393 ZCRB1Q8TBF4 217 aaKnown RBP27.33■■□□□ 1.97
SFXN1-203ENST00000502393 STK32BQ9NY57 414 aa27.33■■□□□ 1.97
SFXN1-203ENST00000502393 RGPD2P0DJD1 1756 aa27.32■■□□□ 1.96
SFXN1-203ENST00000502393 HSP90AB2PQ58FF8 381 aa27.32■■□□□ 1.96
SFXN1-203ENST00000502393 CGNL1Q0VF96 1302 aa27.32■■□□□ 1.96
SFXN1-203ENST00000502393 MEGF6O75095 1541 aa27.31■■□□□ 1.96
SFXN1-203ENST00000502393 SLC15A2Q16348 729 aa27.3■■□□□ 1.96
SFXN1-203ENST00000502393 BTAF1O14981 1849 aa27.3■■□□□ 1.96
SFXN1-203ENST00000502393 CASZ1Q86V15 1759 aa27.28■■□□□ 1.96
SFXN1-203ENST00000502393 RAPGEF4Q8WZA2 1011 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms