RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 LRP6O75581 1613 aa26.33■■□□□ 1.81
LINC01550-201ENST00000499006 AMPHP49418 695 aa26.32■■□□□ 1.8
LINC01550-201ENST00000499006 PLCH1Q4KWH8 1693 aa26.32■■□□□ 1.8
LINC01550-201ENST00000499006 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
LINC01550-201ENST00000499006 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
LINC01550-201ENST00000499006 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
LINC01550-201ENST00000499006 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
LINC01550-201ENST00000499006 HSP90AB2PQ58FF8 381 aa26.3■■□□□ 1.8
LINC01550-201ENST00000499006 PRDM11Q9NQV5 511 aa26.3■■□□□ 1.8
LINC01550-201ENST00000499006 ZBTB7CA1YPR0 619 aa26.29■■□□□ 1.8
LINC01550-201ENST00000499006 FAM83GA6ND36 823 aa26.29■■□□□ 1.8
LINC01550-201ENST00000499006 CHRNA2Q15822 529 aa26.29■■□□□ 1.8
LINC01550-201ENST00000499006 AXIN2Q9Y2T1 843 aa26.29■■□□□ 1.8
LINC01550-201ENST00000499006 CAMTA1Q9Y6Y1 1673 aa26.29■■□□□ 1.8
LINC01550-201ENST00000499006 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
LINC01550-201ENST00000499006 NWD2Q9ULI1 1742 aa26.28■■□□□ 1.8
LINC01550-201ENST00000499006 CFAP53Q96M91 514 aa26.28■■□□□ 1.8
LINC01550-201ENST00000499006 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
LINC01550-201ENST00000499006 RGPD1P0DJD0 1748 aa26.27■■□□□ 1.8
LINC01550-201ENST00000499006 ADAMTS2O95450 1211 aa26.26■■□□□ 1.79
LINC01550-201ENST00000499006 FAM208AQ9UK61 1670 aaKnown RBP26.26■■□□□ 1.79
LINC01550-201ENST00000499006 NRAPQ86VF7 1730 aa26.25■■□□□ 1.79
LINC01550-201ENST00000499006 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
LINC01550-201ENST00000499006 IL13P35225 146 aa26.23■■□□□ 1.79
LINC01550-201ENST00000499006 EIF4A2Q14240 407 aaKnown RBP26.23■■□□□ 1.79
LINC01550-201ENST00000499006 COL5A2P05997 1499 aaPredicted RBP26.22■■□□□ 1.79
LINC01550-201ENST00000499006 SLIT2O94813 1529 aa26.21■■□□□ 1.79
LINC01550-201ENST00000499006 ERBB3P21860 1342 aa26.2■■□□□ 1.78
LINC01550-201ENST00000499006 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
LINC01550-201ENST00000499006 ANKRD24Q8TF21 1146 aa26.18■■□□□ 1.78
LINC01550-201ENST00000499006 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.18■■□□□ 1.78
LINC01550-201ENST00000499006 BTG4Q9NY30 223 aa26.17■■□□□ 1.78
LINC01550-201ENST00000499006 LTV1Q96GA3 475 aaPredicted RBP26.16■■□□□ 1.78
LINC01550-201ENST00000499006 C8orf37Q96NL8 207 aa26.15■■□□□ 1.78
LINC01550-201ENST00000499006 NUDCQ9Y266 331 aa26.15■■□□□ 1.78
LINC01550-201ENST00000499006 FNBP4Q8N3X1 1017 aaPredicted RBP26.14■■□□□ 1.78
LINC01550-201ENST00000499006 WDR17Q8IZU2 1322 aa26.13■■□□□ 1.77
LINC01550-201ENST00000499006 NCAPD2Q15021 1401 aa26.13■■□□□ 1.77
LINC01550-201ENST00000499006 EYA1Q99502 592 aa26.13■■□□□ 1.77
LINC01550-201ENST00000499006 IGSF1Q8N6C5 1336 aa26.13■■□□□ 1.77
LINC01550-201ENST00000499006 MEX3CQ5U5Q3 659 aaKnown RBP26.12■■□□□ 1.77
LINC01550-201ENST00000499006 NGLY1Q96IV0 654 aa26.12■■□□□ 1.77
LINC01550-201ENST00000499006 BCL9LQ86UU0 1499 aa26.12■■□□□ 1.77
LINC01550-201ENST00000499006 U2SURPO15042 1029 aaKnown RBP26.11■■□□□ 1.77
LINC01550-201ENST00000499006 NBPF6Q5VWK0 638 aa26.11■■□□□ 1.77
LINC01550-201ENST00000499006 ILDR1Q86SU0 546 aaPredicted RBP26.11■■□□□ 1.77
LINC01550-201ENST00000499006 NBPF4Q96M43 638 aa26.11■■□□□ 1.77
LINC01550-201ENST00000499006 WDR43Q15061 677 aaKnown RBP eCLIP26.1■■□□□ 1.77
LINC01550-201ENST00000499006 ADAMTS8Q9UP79 889 aa26.1■■□□□ 1.77
LINC01550-201ENST00000499006 EVA1CP58658 441 aa26.09■■□□□ 1.77
LINC01550-201ENST00000499006 STRN4Q9NRL3 753 aa26.09■■□□□ 1.77
LINC01550-201ENST00000499006 KDRP35968 1356 aa26.08■■□□□ 1.77
LINC01550-201ENST00000499006 CRB1P82279 1406 aa26.08■■□□□ 1.77
LINC01550-201ENST00000499006 U2AF1L5P0DN76 240 aaPredicted RBP26.08■■□□□ 1.77
LINC01550-201ENST00000499006 CSB-PGBD3P0DP91 1061 aa26.08■■□□□ 1.77
LINC01550-201ENST00000499006 U2AF1Q01081 240 aaKnown RBP eCLIP26.08■■□□□ 1.77
LINC01550-201ENST00000499006 LARP1Q6PKG0 1096 aaKnown RBP26.08■■□□□ 1.77
LINC01550-201ENST00000499006 UNC5CLQ8IV45 518 aa26.07■■□□□ 1.76
LINC01550-201ENST00000499006 FAM9BQ8IZU0 186 aa26.07■■□□□ 1.76
LINC01550-201ENST00000499006 WNK3Q9BYP7 1800 aa26.07■■□□□ 1.76
LINC01550-201ENST00000499006 AFF2P51816 1311 aa26.06■■□□□ 1.76
LINC01550-201ENST00000499006 SULT6B1Q6IMI4 303 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 TOM1L2Q6ZVM7 507 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 NLRP2Q9NX02 1062 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 HMOX1P09601 288 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 AEBP1Q8IUX7 1158 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 USHBP1Q8N6Y0 703 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 CARD10Q9BWT7 1032 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 RSPH6AQ9H0K4 717 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 USP21Q9UK80 565 aa26.04■■□□□ 1.76
LINC01550-201ENST00000499006 FCHSD2O94868 740 aa26.03■■□□□ 1.76
LINC01550-201ENST00000499006 PARP4Q9UKK3 1724 aaKnown RBP26■■□□□ 1.75
LINC01550-201ENST00000499006 PLEKHF1Q96S99 279 aa26■■□□□ 1.75
LINC01550-201ENST00000499006 SPATA31A5Q5VU36 1347 aa25.99■■□□□ 1.75
LINC01550-201ENST00000499006 SPATA31A7Q8IWB4 1347 aa25.99■■□□□ 1.75
LINC01550-201ENST00000499006 VPS72Q15906 364 aa25.99■■□□□ 1.75
LINC01550-201ENST00000499006 SPATA31A1Q5TZJ5 1347 aa25.99■■□□□ 1.75
LINC01550-201ENST00000499006 ATRNO75882 1429 aa25.98■■□□□ 1.75
LINC01550-201ENST00000499006 DLG5Q8TDM6 1919 aa25.97■■□□□ 1.75
LINC01550-201ENST00000499006 PRKAR2BP31323 418 aa25.97■■□□□ 1.75
LINC01550-201ENST00000499006 PNNQ9H307 717 aaKnown RBP25.97■■□□□ 1.75
LINC01550-201ENST00000499006 PKD1L3Q7Z443 1732 aa25.97■■□□□ 1.75
LINC01550-201ENST00000499006 MEGF6O75095 1541 aa25.95■■□□□ 1.75
LINC01550-201ENST00000499006 CCDC146Q8IYE0 955 aa25.95■■□□□ 1.74
LINC01550-201ENST00000499006 GLI3P10071 1580 aa25.95■■□□□ 1.74
LINC01550-201ENST00000499006 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.74
LINC01550-201ENST00000499006 RUNDC1Q96C34 613 aa25.94■■□□□ 1.74
LINC01550-201ENST00000499006 USP35Q9P2H5 1018 aa25.94■■□□□ 1.74
LINC01550-201ENST00000499006 THRAP3Q9Y2W1 955 aaKnown RBP25.94■■□□□ 1.74
LINC01550-201ENST00000499006 SHANK3Q9BYB0 1731 aa25.93■■□□□ 1.74
LINC01550-201ENST00000499006 DISP2A7MBM2 1401 aa25.93■■□□□ 1.74
LINC01550-201ENST00000499006 TCP11L2Q8N4U5 519 aa25.93■■□□□ 1.74
LINC01550-201ENST00000499006 TRPC5Q9UL62 973 aaPredicted RBP25.93■■□□□ 1.74
LINC01550-201ENST00000499006 PHACTR3Q96KR7 559 aa25.91■■□□□ 1.74
LINC01550-201ENST00000499006 OVOS2A0A0G2JMS6 1433 aa25.91■■□□□ 1.74
LINC01550-201ENST00000499006 ZNF772Q68DY9 489 aaPredicted RBP25.91■■□□□ 1.74
LINC01550-201ENST00000499006 BARGINQ6ZT62 677 aa25.91■■□□□ 1.74
LINC01550-201ENST00000499006 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
LINC01550-201ENST00000499006 CCDC9Q9Y3X0 531 aaKnown RBP25.91■■□□□ 1.74
LINC01550-201ENST00000499006 VIRMAQ69YN4 1812 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms