RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 MPNDQ8N594 471 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 LRRC37A3O60309 1634 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 ATP7BP35670 1465 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 ERBINQ96RT1 1412 aa8.56□□□□□ -1.04
FXN-205ENST00000498653 CTCFP49711 727 aaPredicted RBP8.56□□□□□ -1.04
FXN-205ENST00000498653 TXNRD1Q16881 649 aa8.56□□□□□ -1.04
FXN-205ENST00000498653 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
FXN-205ENST00000498653 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
FXN-205ENST00000498653 LBX1P52954 281 aa8.55□□□□□ -1.04
FXN-205ENST00000498653 PLCD3Q8N3E9 789 aa8.55□□□□□ -1.04
FXN-205ENST00000498653 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
FXN-205ENST00000498653 ALS2Q96Q42 1657 aa8.54□□□□□ -1.04
FXN-205ENST00000498653 POLD1P28340 1107 aa8.54□□□□□ -1.04
FXN-205ENST00000498653 BARGINQ6ZT62 677 aa8.54□□□□□ -1.04
FXN-205ENST00000498653 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
FXN-205ENST00000498653 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
FXN-205ENST00000498653 FMN2Q9NZ56 1722 aa8.54□□□□□ -1.04
FXN-205ENST00000498653 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
FXN-205ENST00000498653 ZNF827Q17R98 1081 aa8.53□□□□□ -1.04
FXN-205ENST00000498653 MIER1Q8N108 512 aa8.53□□□□□ -1.04
FXN-205ENST00000498653 TRPM3Q9HCF6 1732 aaPredicted RBP8.53□□□□□ -1.04
FXN-205ENST00000498653 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
FXN-205ENST00000498653 HFM1A2PYH4 1435 aa8.52□□□□□ -1.05
FXN-205ENST00000498653 SBNO1A3KN83 1393 aa8.51□□□□□ -1.05
FXN-205ENST00000498653 KANK1Q14678 1352 aa8.51□□□□□ -1.05
FXN-205ENST00000498653 TSPY4P0CV99 314 aa8.51□□□□□ -1.05
FXN-205ENST00000498653 TSPY10P0CW01 314 aa8.51□□□□□ -1.05
FXN-205ENST00000498653 HSPA8P11142 646 aaKnown RBP8.51□□□□□ -1.05
FXN-205ENST00000498653 KRT28Q7Z3Y7 464 aa8.51□□□□□ -1.05
FXN-205ENST00000498653 C16orf71Q8IYS4 520 aaPredicted RBP8.51□□□□□ -1.05
FXN-205ENST00000498653 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
FXN-205ENST00000498653 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
FXN-205ENST00000498653 COL6A3P12111 3177 aa8.5□□□□□ -1.05
FXN-205ENST00000498653 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
FXN-205ENST00000498653 AKAP12Q02952 1782 aa8.5□□□□□ -1.05
FXN-205ENST00000498653 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 CEP162Q5TB80 1403 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 SSH2Q76I76 1423 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
FXN-205ENST00000498653 CHRDL2Q6WN34 429 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 SMC1BQ8NDV3 1235 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 PMFBP1Q8TBY8 1022 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
FXN-205ENST00000498653 BCL9O00512 1426 aa8.48□□□□□ -1.05
FXN-205ENST00000498653 NAIPQ13075 1403 aa8.48□□□□□ -1.05
FXN-205ENST00000498653 HABP4Q5JVS0 413 aaKnown RBP8.48□□□□□ -1.05
FXN-205ENST00000498653 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
FXN-205ENST00000498653 QRICH2Q9H0J4 1663 aa8.47□□□□□ -1.05
FXN-205ENST00000498653 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
FXN-205ENST00000498653 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
FXN-205ENST00000498653 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
FXN-205ENST00000498653 PNPLA7Q6ZV29 1317 aa8.47□□□□□ -1.05
FXN-205ENST00000498653 NHSQ6T4R5 1651 aa8.46□□□□□ -1.05
FXN-205ENST00000498653 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
FXN-205ENST00000498653 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
FXN-205ENST00000498653 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
FXN-205ENST00000498653 LMO7Q8WWI1 1683 aa8.46□□□□□ -1.06
FXN-205ENST00000498653 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
FXN-205ENST00000498653 KNDC1Q76NI1 1749 aa8.45□□□□□ -1.06
FXN-205ENST00000498653 CNTNAP1P78357 1384 aa8.45□□□□□ -1.06
FXN-205ENST00000498653 MEGF6O75095 1541 aa8.44□□□□□ -1.06
FXN-205ENST00000498653 PIK3C2AO00443 1686 aa8.44□□□□□ -1.06
FXN-205ENST00000498653 FXR1P51114 621 aaKnown RBP eCLIP8.44□□□□□ -1.06
FXN-205ENST00000498653 GCC1Q96CN9 775 aa8.44□□□□□ -1.06
FXN-205ENST00000498653 CD2APQ9Y5K6 639 aa8.44□□□□□ -1.06
FXN-205ENST00000498653 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 TCP11L2Q8N4U5 519 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 E9PCH4 1651 aa8.43□□□□□ -1.06
FXN-205ENST00000498653 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
FXN-205ENST00000498653 KIAA0232Q92628 1395 aa8.42□□□□□ -1.06
FXN-205ENST00000498653 PLEKHG2Q9H7P9 1386 aa8.42□□□□□ -1.06
FXN-205ENST00000498653 CLTCL1P53675 1640 aa8.42□□□□□ -1.06
FXN-205ENST00000498653 BTAF1O14981 1849 aa8.42□□□□□ -1.06
FXN-205ENST00000498653 CACNA1AO00555 2505 aa8.42□□□□□ -1.06
FXN-205ENST00000498653 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
FXN-205ENST00000498653 THSD7BQ9C0I4 1608 aa8.41□□□□□ -1.06
FXN-205ENST00000498653 BRD4O60885 1362 aaPredicted RBP8.41□□□□□ -1.06
FXN-205ENST00000498653 PSME1Q06323 249 aa8.41□□□□□ -1.06
FXN-205ENST00000498653 LTBP1Q14766 1721 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 FXR2P51116 673 aaKnown RBP eCLIP8.4□□□□□ -1.06
FXN-205ENST00000498653 CHRNA2Q15822 529 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
FXN-205ENST00000498653 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 SPOCK2Q92563 424 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 MCOLN1Q9GZU1 580 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 RRAGCQ9HB90 399 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 CREBZFQ9NS37 354 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 LRRC4BQ9NT99 713 aa8.4□□□□□ -1.06
FXN-205ENST00000498653 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
FXN-205ENST00000498653 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
FXN-205ENST00000498653 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
FXN-205ENST00000498653 MKI67P46013 3256 aaKnown RBP8.38□□□□□ -1.07
FXN-205ENST00000498653 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
FXN-205ENST00000498653 EEA1Q15075 1411 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms