RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
LRRC55-201ENST00000497933 FSD1Q9BTV5 496 aa13.43□□□□□ -0.26
LRRC55-201ENST00000497933 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
LRRC55-201ENST00000497933 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
LRRC55-201ENST00000497933 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
LRRC55-201ENST00000497933 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
LRRC55-201ENST00000497933 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
LRRC55-201ENST00000497933 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
LRRC55-201ENST00000497933 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
LRRC55-201ENST00000497933 XBP1P17861 261 aa13.42□□□□□ -0.26
LRRC55-201ENST00000497933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
LRRC55-201ENST00000497933 SART3Q15020 963 aaKnown RBP13.41□□□□□ -0.26
LRRC55-201ENST00000497933 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
LRRC55-201ENST00000497933 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
LRRC55-201ENST00000497933 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
LRRC55-201ENST00000497933 CCDC141Q6ZP82 1450 aa13.41□□□□□ -0.26
LRRC55-201ENST00000497933 ZNF530Q6P9A1 599 aaPredicted RBP13.41□□□□□ -0.26
LRRC55-201ENST00000497933 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
LRRC55-201ENST00000497933 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 OFD1O75665 1012 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
LRRC55-201ENST00000497933 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 FCHSD2O94868 740 aa13.4□□□□□ -0.26
LRRC55-201ENST00000497933 SMC2O95347 1197 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 NEK4P51957 841 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
LRRC55-201ENST00000497933 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
LRRC55-201ENST00000497933 WDR97A6NE52 1622 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 CCDC192P0DO97 292 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 CABP4P57796 275 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
LRRC55-201ENST00000497933 CBX1P83916 185 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
LRRC55-201ENST00000497933 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
LRRC55-201ENST00000497933 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
LRRC55-201ENST00000497933 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
LRRC55-201ENST00000497933 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
LRRC55-201ENST00000497933 NOB1Q9ULX3 412 aaKnown RBP13.38□□□□□ -0.27
LRRC55-201ENST00000497933 NAIPQ13075 1403 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
LRRC55-201ENST00000497933 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
LRRC55-201ENST00000497933 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 ERLIN1O75477 346 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 BCAR3O75815 825 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
LRRC55-201ENST00000497933 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 MPNDQ8N594 471 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
LRRC55-201ENST00000497933 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
LRRC55-201ENST00000497933 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
LRRC55-201ENST00000497933 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
LRRC55-201ENST00000497933 FOSBP53539 338 aa13.36□□□□□ -0.27
LRRC55-201ENST00000497933 AXDND1Q5T1B0 1012 aaPredicted RBP13.36□□□□□ -0.27
LRRC55-201ENST00000497933 KCNH5Q8NCM2 988 aa13.36□□□□□ -0.27
LRRC55-201ENST00000497933 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
LRRC55-201ENST00000497933 EPS15P42566 896 aa13.36□□□□□ -0.27
LRRC55-201ENST00000497933 ODF2Q5BJF6 829 aa13.36□□□□□ -0.27
LRRC55-201ENST00000497933 USP8P40818 1118 aa13.35□□□□□ -0.27
LRRC55-201ENST00000497933 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
LRRC55-201ENST00000497933 CDK13Q14004 1512 aaKnown RBP13.35□□□□□ -0.27
LRRC55-201ENST00000497933 CLCN1P35523 988 aa13.35□□□□□ -0.27
LRRC55-201ENST00000497933 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
LRRC55-201ENST00000497933 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRRC55-201ENST00000497933 NUDT16Q96DE0 195 aaKnown RBP13.35□□□□□ -0.27
LRRC55-201ENST00000497933 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
LRRC55-201ENST00000497933 KIAA0754O94854 1291 aa13.34□□□□□ -0.27
LRRC55-201ENST00000497933 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
LRRC55-201ENST00000497933 FIBPO43427 364 aa13.34□□□□□ -0.27
LRRC55-201ENST00000497933 LRRCC1Q9C099 1032 aa13.34□□□□□ -0.27
LRRC55-201ENST00000497933 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
LRRC55-201ENST00000497933 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
LRRC55-201ENST00000497933 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
LRRC55-201ENST00000497933 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
LRRC55-201ENST00000497933 FYB1O15117 783 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
LRRC55-201ENST00000497933 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
LRRC55-201ENST00000497933 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 ARHGEF11O15085 1522 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 CUL7Q14999 1698 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 ERLIN2O94905 339 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
LRRC55-201ENST00000497933 MVPQ14764 893 aaKnown RBP13.33□□□□□ -0.28
LRRC55-201ENST00000497933 STK38Q15208 465 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.28
LRRC55-201ENST00000497933 ZNHIT6Q9NWK9 470 aaKnown RBP13.33□□□□□ -0.28
LRRC55-201ENST00000497933 DDX54Q8TDD1 881 aaKnown RBP13.32□□□□□ -0.28
LRRC55-201ENST00000497933 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
LRRC55-201ENST00000497933 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
LRRC55-201ENST00000497933 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
LRRC55-201ENST00000497933 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
LRRC55-201ENST00000497933 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms