RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 SIAH2O43255 324 aa11.1□□□□□ -0.63
TRA2A-210ENST00000497730 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
TRA2A-210ENST00000497730 MAP4K5Q9Y4K4 846 aa11.1□□□□□ -0.63
TRA2A-210ENST00000497730 TNFRSF10AO00220 468 aa11.09□□□□□ -0.63
TRA2A-210ENST00000497730 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
TRA2A-210ENST00000497730 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
TRA2A-210ENST00000497730 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
TRA2A-210ENST00000497730 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
TRA2A-210ENST00000497730 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
TRA2A-210ENST00000497730 FSHRP23945 695 aa11.08□□□□□ -0.64
TRA2A-210ENST00000497730 TFIP11Q9UBB9 837 aaKnown RBP11.08□□□□□ -0.64
TRA2A-210ENST00000497730 SKIP12755 728 aa11.07□□□□□ -0.64
TRA2A-210ENST00000497730 TTC24A2A3L6 582 aaPredicted RBP11.06□□□□□ -0.64
TRA2A-210ENST00000497730 ESPNB1AK53 854 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 ATP9BO43861 1147 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 GDF9O60383 454 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 RNF20Q5VTR2 975 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 MPNDQ8N594 471 aa11.06□□□□□ -0.64
TRA2A-210ENST00000497730 ADH1CP00326 375 aa11.05□□□□□ -0.64
TRA2A-210ENST00000497730 RFX1P22670 979 aa11.05□□□□□ -0.64
TRA2A-210ENST00000497730 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
TRA2A-210ENST00000497730 GRM5P41594 1212 aa11.05□□□□□ -0.64
TRA2A-210ENST00000497730 INTS6LQ5JSJ4 861 aaKnown RBP11.05□□□□□ -0.64
TRA2A-210ENST00000497730 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
TRA2A-210ENST00000497730 NFATC2IPQ8NCF5 419 aa11.05□□□□□ -0.64
TRA2A-210ENST00000497730 SNIP1Q8TAD8 396 aaKnown RBP11.05□□□□□ -0.64
TRA2A-210ENST00000497730 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
TRA2A-210ENST00000497730 SEPT12Q8IYM1 358 aa11.04□□□□□ -0.64
TRA2A-210ENST00000497730 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
TRA2A-210ENST00000497730 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-210ENST00000497730 MAFBQ9Y5Q3 323 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-210ENST00000497730 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
TRA2A-210ENST00000497730 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
TRA2A-210ENST00000497730 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
TRA2A-210ENST00000497730 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
TRA2A-210ENST00000497730 DEPDC4Q8N2C3 294 aa11.03□□□□□ -0.64
TRA2A-210ENST00000497730 DOLKQ9UPQ8 538 aa11.03□□□□□ -0.64
TRA2A-210ENST00000497730 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
TRA2A-210ENST00000497730 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 J3QL48 77 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 NR5A1Q13285 461 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 USP17L2Q6R6M4 530 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
TRA2A-210ENST00000497730 ERVH48-1M5A8F1 160 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 NR3C2P08235 984 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PRR20EP86478 221 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PRR20CP86479 221 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PRR20DP86480 221 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PRR20BP86481 221 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PRR20AP86496 221 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 MAP7D1Q3KQU3 841 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 CCDC116Q8IYX3 515 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
TRA2A-210ENST00000497730 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
TRA2A-210ENST00000497730 NNTQ13423 1086 aa10.99□□□□□ -0.65
TRA2A-210ENST00000497730 TOR4AQ9NXH8 423 aa10.99□□□□□ -0.65
TRA2A-210ENST00000497730 DHX9Q08211 1270 aaKnown RBP10.98□□□□□ -0.65
TRA2A-210ENST00000497730 NCOA4Q13772 614 aa10.98□□□□□ -0.65
TRA2A-210ENST00000497730 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
TRA2A-210ENST00000497730 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
TRA2A-210ENST00000497730 TMPRSS4Q9NRS4 437 aa10.98□□□□□ -0.65
TRA2A-210ENST00000497730 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
TRA2A-210ENST00000497730 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
TRA2A-210ENST00000497730 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
TRA2A-210ENST00000497730 SMPD1P17405 629 aa10.96□□□□□ -0.65
TRA2A-210ENST00000497730 EML3Q32P44 896 aa10.96□□□□□ -0.65
TRA2A-210ENST00000497730 PPP1R26Q5T8A7 1209 aaPredicted RBP10.96□□□□□ -0.65
TRA2A-210ENST00000497730 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
TRA2A-210ENST00000497730 LZTS3O60299 673 aaPredicted RBP10.94□□□□□ -0.66
TRA2A-210ENST00000497730 ZNF784Q8NCA9 323 aaPredicted RBP10.94□□□□□ -0.66
TRA2A-210ENST00000497730 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
TRA2A-210ENST00000497730 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
TRA2A-210ENST00000497730 VRTNQ9H8Y1 702 aa10.94□□□□□ -0.66
TRA2A-210ENST00000497730 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
TRA2A-210ENST00000497730 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
TRA2A-210ENST00000497730 EMILIN1Q9Y6C2 1016 aa10.94□□□□□ -0.66
TRA2A-210ENST00000497730 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
TRA2A-210ENST00000497730 SCTRP47872 440 aa10.93□□□□□ -0.66
TRA2A-210ENST00000497730 USP4Q13107 963 aa10.93□□□□□ -0.66
TRA2A-210ENST00000497730 NOD1Q9Y239 953 aa10.93□□□□□ -0.66
TRA2A-210ENST00000497730 MYT1Q01538 1121 aa10.92□□□□□ -0.66
TRA2A-210ENST00000497730 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
TRA2A-210ENST00000497730 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
TRA2A-210ENST00000497730 WDR4P57081 412 aaKnown RBP10.91□□□□□ -0.66
TRA2A-210ENST00000497730 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
TRA2A-210ENST00000497730 CC2D2BQ6DHV5 1058 aa10.91□□□□□ -0.66
TRA2A-210ENST00000497730 HPS1Q92902 700 aa10.91□□□□□ -0.66
TRA2A-210ENST00000497730 FAM187AA6NFU0 413 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
TRA2A-210ENST00000497730 Q6ZNB5 142 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 ITPKCQ96DU7 683 aa10.9□□□□□ -0.66
TRA2A-210ENST00000497730 GFRA3O60609 400 aa10.89□□□□□ -0.67
TRA2A-210ENST00000497730 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms