RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 SPAG9O60271 1321 aaKnown RBP15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 KCNJ4P48050 445 aa15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 NUP160Q12769 1436 aa15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 ABCC10Q5T3U5 1492 aa15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 CROCC2H7BZ55 1655 aa15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 OTUD7AQ8TE49 926 aaPredicted RBP15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 SYNMO15061 1565 aa15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 ERICH4A6NGS2 130 aa15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
GAPVD1-220ENST00000497580 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
GAPVD1-220ENST00000497580 PDIA4P13667 645 aaKnown RBP15.87■□□□□ 0.13
GAPVD1-220ENST00000497580 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
GAPVD1-220ENST00000497580 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
GAPVD1-220ENST00000497580 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
GAPVD1-220ENST00000497580 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
GAPVD1-220ENST00000497580 EFCAB2Q5VUJ9 269 aa15.86■□□□□ 0.13
GAPVD1-220ENST00000497580 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
GAPVD1-220ENST00000497580 DIAPH3Q9NSV4 1193 aa15.86■□□□□ 0.13
GAPVD1-220ENST00000497580 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
GAPVD1-220ENST00000497580 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
GAPVD1-220ENST00000497580 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
GAPVD1-220ENST00000497580 SHANK2Q9UPX8 1470 aa15.85■□□□□ 0.13
GAPVD1-220ENST00000497580 PHF14O94880 888 aa15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 PYCARDQ9ULZ3 195 aa15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 PPIP5K1Q6PFW1 1433 aa15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
GAPVD1-220ENST00000497580 DTNBO60941 627 aa15.83■□□□□ 0.13
GAPVD1-220ENST00000497580 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.13
GAPVD1-220ENST00000497580 TMX3Q96JJ7 454 aa15.83■□□□□ 0.13
GAPVD1-220ENST00000497580 NAA30Q147X3 362 aaPredicted RBP15.83■□□□□ 0.12
GAPVD1-220ENST00000497580 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
GAPVD1-220ENST00000497580 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
GAPVD1-220ENST00000497580 ZBTB7BO15156 539 aaPredicted RBP15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 C16orf45Q96MC5 204 aaPredicted RBP15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 FBLN1P23142 703 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 SRPK2P78362 688 aaKnown RBP15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 CHMP3Q9Y3E7 222 aa15.82■□□□□ 0.12
GAPVD1-220ENST00000497580 TTC22Q5TAA0 569 aa15.81■□□□□ 0.12
GAPVD1-220ENST00000497580 SDSP20132 328 aa15.81■□□□□ 0.12
GAPVD1-220ENST00000497580 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.125e-6■■■■□ 24.4
GAPVD1-220ENST00000497580 DRC7Q8IY82 874 aa15.81■□□□□ 0.12
GAPVD1-220ENST00000497580 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
GAPVD1-220ENST00000497580 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
GAPVD1-220ENST00000497580 IFT57Q9NWB7 429 aa15.8■□□□□ 0.12
GAPVD1-220ENST00000497580 FIBPO43427 364 aa15.8■□□□□ 0.12
GAPVD1-220ENST00000497580 GIMAP6Q6P9H5 292 aa15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 REC8O95072 547 aa15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 TSHZ3Q63HK5 1081 aa15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 MYO5CQ9NQX4 1742 aa15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 LAMC1P11047 1609 aa15.79■□□□□ 0.12
GAPVD1-220ENST00000497580 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 TSPYL6Q8N831 410 aa15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 NPHP1O15259 732 aa15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 TAF3Q5VWG9 929 aa15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 IPO4Q8TEX9 1081 aaKnown RBP15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
GAPVD1-220ENST00000497580 OGFRQ9NZT2 677 aa15.77■□□□□ 0.12
GAPVD1-220ENST00000497580 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
GAPVD1-220ENST00000497580 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.11
GAPVD1-220ENST00000497580 BRD1O95696 1058 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 KANK1Q14678 1352 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 PTGS1P23219 599 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 KDM4AO75164 1064 aa15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
GAPVD1-220ENST00000497580 ERC2O15083 957 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 AEBP1Q8IUX7 1158 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 KCNF1Q9H3M0 494 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 CCDC183Q5T5S1 534 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 CERS3Q8IU89 383 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 SPTLC3Q9NUV7 552 aa15.75■□□□□ 0.11
GAPVD1-220ENST00000497580 CFAP74Q9C0B2 1584 aa15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 UVSSAQ2YD98 709 aa15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 ANKRD7Q92527 254 aa15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 FEZ1Q99689 392 aa15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 KDM5AP29375 1690 aaKnown RBP15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 NOS1P29475 1434 aa15.74■□□□□ 0.11
GAPVD1-220ENST00000497580 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
GAPVD1-220ENST00000497580 GOLGA6L6A8MZA4 724 aa15.73■□□□□ 0.11
GAPVD1-220ENST00000497580 HMOX1P09601 288 aa15.73■□□□□ 0.11
GAPVD1-220ENST00000497580 LRMPQ12912 555 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms