RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
HPS1-213ENST00000497527 SPATA31A3Q5VYP0 1347 aa16.01■□□□□ 0.15
HPS1-213ENST00000497527 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
HPS1-213ENST00000497527 ZNF521Q96K83 1311 aa16■□□□□ 0.15
HPS1-213ENST00000497527 HOXC9P31274 260 aa16■□□□□ 0.15
HPS1-213ENST00000497527 GOLGA2Q08379 1002 aa16■□□□□ 0.15
HPS1-213ENST00000497527 HSP90AB2PQ58FF8 381 aa16■□□□□ 0.15
HPS1-213ENST00000497527 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
HPS1-213ENST00000497527 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
HPS1-213ENST00000497527 GCP02774 474 aa15.99■□□□□ 0.15
HPS1-213ENST00000497527 IP6K1Q92551 441 aa15.99■□□□□ 0.15
HPS1-213ENST00000497527 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
HPS1-213ENST00000497527 NEFLP07196 543 aa15.98■□□□□ 0.15
HPS1-213ENST00000497527 PRKAR2BP31323 418 aa15.98■□□□□ 0.15
HPS1-213ENST00000497527 FAM208AQ9UK61 1670 aaKnown RBP15.98■□□□□ 0.15
HPS1-213ENST00000497527 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
HPS1-213ENST00000497527 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
HPS1-213ENST00000497527 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
HPS1-213ENST00000497527 E9PSI1 815 aa15.96■□□□□ 0.15
HPS1-213ENST00000497527 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
HPS1-213ENST00000497527 ARHGEF25Q86VW2 580 aa15.96■□□□□ 0.15
HPS1-213ENST00000497527 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
HPS1-213ENST00000497527 ABCA3Q99758 1704 aa15.96■□□□□ 0.15
HPS1-213ENST00000497527 SENP3-EIF4A1A0A087X0R7 540 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 HMOX1P09601 288 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 GTF3C3Q9Y5Q9 886 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 KDRP35968 1356 aa15.95■□□□□ 0.14
HPS1-213ENST00000497527 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
HPS1-213ENST00000497527 SULT6B1Q6IMI4 303 aa15.94■□□□□ 0.14
HPS1-213ENST00000497527 DDX17Q92841 729 aaKnown RBP15.94■□□□□ 0.14
HPS1-213ENST00000497527 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
HPS1-213ENST00000497527 TOM1O60784 492 aa15.93■□□□□ 0.14
HPS1-213ENST00000497527 CALD1Q05682 793 aaKnown RBP15.93■□□□□ 0.14
HPS1-213ENST00000497527 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
HPS1-213ENST00000497527 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
HPS1-213ENST00000497527 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
HPS1-213ENST00000497527 COL18A1P39060 1754 aa15.92■□□□□ 0.14
HPS1-213ENST00000497527 CPDO75976 1380 aa15.92■□□□□ 0.14
HPS1-213ENST00000497527 RIPK4P57078 832 aa15.92■□□□□ 0.14
HPS1-213ENST00000497527 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
HPS1-213ENST00000497527 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
HPS1-213ENST00000497527 IL16Q14005 1332 aa15.92■□□□□ 0.14
HPS1-213ENST00000497527 RGPD2P0DJD1 1756 aa15.91■□□□□ 0.14
HPS1-213ENST00000497527 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
HPS1-213ENST00000497527 CDCA7LQ96GN5 454 aa15.91■□□□□ 0.14
HPS1-213ENST00000497527 EYA1Q99502 592 aa15.91■□□□□ 0.14
HPS1-213ENST00000497527 TRMT2AQ8IZ69 625 aaKnown RBP15.9■□□□□ 0.14
HPS1-213ENST00000497527 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
HPS1-213ENST00000497527 MYH16Q9H6N6 1097 aa15.9■□□□□ 0.14
HPS1-213ENST00000497527 PHLPP1O60346 1717 aa15.9■□□□□ 0.14
HPS1-213ENST00000497527 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
HPS1-213ENST00000497527 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
HPS1-213ENST00000497527 DUSP27Q5VZP5 1158 aa15.89■□□□□ 0.13
HPS1-213ENST00000497527 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
HPS1-213ENST00000497527 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
HPS1-213ENST00000497527 GAS2L2Q8NHY3 880 aa15.88■□□□□ 0.13
HPS1-213ENST00000497527 LTV1Q96GA3 475 aaPredicted RBP15.88■□□□□ 0.13
HPS1-213ENST00000497527 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
HPS1-213ENST00000497527 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
HPS1-213ENST00000497527 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
HPS1-213ENST00000497527 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
HPS1-213ENST00000497527 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
HPS1-213ENST00000497527 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
HPS1-213ENST00000497527 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
HPS1-213ENST00000497527 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
HPS1-213ENST00000497527 ANKRD24Q8TF21 1146 aa15.86■□□□□ 0.13
HPS1-213ENST00000497527 ERICH6BQ5W0A0 696 aa15.85■□□□□ 0.13
HPS1-213ENST00000497527 COL16A1Q07092 1604 aaPredicted RBP15.85■□□□□ 0.13
HPS1-213ENST00000497527 ERBB3P21860 1342 aa15.85■□□□□ 0.13
HPS1-213ENST00000497527 KIAA0232Q92628 1395 aa15.85■□□□□ 0.13
HPS1-213ENST00000497527 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
HPS1-213ENST00000497527 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
HPS1-213ENST00000497527 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
HPS1-213ENST00000497527 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
HPS1-213ENST00000497527 GNAI1P63096 354 aa15.83■□□□□ 0.12
HPS1-213ENST00000497527 PRDM11Q9NQV5 511 aa15.83■□□□□ 0.12
HPS1-213ENST00000497527 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
HPS1-213ENST00000497527 NBPF6Q5VWK0 638 aa15.82■□□□□ 0.12
HPS1-213ENST00000497527 NBPF4Q96M43 638 aa15.82■□□□□ 0.12
HPS1-213ENST00000497527 AMOTQ4VCS5 1084 aa15.81■□□□□ 0.12
HPS1-213ENST00000497527 VIRMAQ69YN4 1812 aaKnown RBP15.81■□□□□ 0.12
HPS1-213ENST00000497527 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.81■□□□□ 0.12
HPS1-213ENST00000497527 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
HPS1-213ENST00000497527 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
HPS1-213ENST00000497527 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
HPS1-213ENST00000497527 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
HPS1-213ENST00000497527 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
HPS1-213ENST00000497527 FKBP8Q14318 412 aa15.8■□□□□ 0.12
HPS1-213ENST00000497527 PLEKHO1Q53GL0 409 aaPredicted RBP15.8■□□□□ 0.12
HPS1-213ENST00000497527 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
HPS1-213ENST00000497527 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
HPS1-213ENST00000497527 MTHFSDQ2M296 383 aaKnown RBP15.79■□□□□ 0.12
HPS1-213ENST00000497527 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
HPS1-213ENST00000497527 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
HPS1-213ENST00000497527 FANCIQ9NVI1 1328 aa15.78■□□□□ 0.12
HPS1-213ENST00000497527 RRP1P56182 461 aaKnown RBP15.78■□□□□ 0.12
HPS1-213ENST00000497527 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 CHRNA2Q15822 529 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms