RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SLIT2O94813 1529 aa26.51■■□□□ 1.83
SCAMP3-209ENST00000497470 COL3A1P02461 1466 aaPredicted RBP26.51■■□□□ 1.83
SCAMP3-209ENST00000497470 LRP6O75581 1613 aa26.5■■□□□ 1.83
SCAMP3-209ENST00000497470 NWD2Q9ULI1 1742 aa26.5■■□□□ 1.83
SCAMP3-209ENST00000497470 MIER1Q8N108 512 aa26.49■■□□□ 1.83
SCAMP3-209ENST00000497470 ERBB3P21860 1342 aa26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 NUTM2BA6NNL0 878 aaPredicted RBP26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 NUTM2EB1AL46 878 aaPredicted RBP26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 DIAPH1O60610 1272 aaKnown RBP26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 HSP90AB2PQ58FF8 381 aa26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 NUTM2AQ8IVF1 878 aaPredicted RBP26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 NUDCQ9Y266 331 aa26.48■■□□□ 1.83
SCAMP3-209ENST00000497470 CAMTA1Q9Y6Y1 1673 aa26.47■■□□□ 1.83
SCAMP3-209ENST00000497470 AXIN2Q9Y2T1 843 aa26.47■■□□□ 1.83
SCAMP3-209ENST00000497470 PLEKHG2Q9H7P9 1386 aa26.46■■□□□ 1.83
SCAMP3-209ENST00000497470 PPM1GO15355 546 aaPredicted RBP26.46■■□□□ 1.83
SCAMP3-209ENST00000497470 ADAMTS2O95450 1211 aa26.46■■□□□ 1.83
SCAMP3-209ENST00000497470 IL13P35225 146 aa26.46■■□□□ 1.83
SCAMP3-209ENST00000497470 FAM208AQ9UK61 1670 aaKnown RBP26.46■■□□□ 1.83
SCAMP3-209ENST00000497470 COL5A2P05997 1499 aaPredicted RBP26.45■■□□□ 1.82
SCAMP3-209ENST00000497470 EIF4A2Q14240 407 aaKnown RBP26.44■■□□□ 1.82
SCAMP3-209ENST00000497470 CHRNA2Q15822 529 aa26.44■■□□□ 1.82
SCAMP3-209ENST00000497470 WDR17Q8IZU2 1322 aa26.43■■□□□ 1.82
SCAMP3-209ENST00000497470 NCAPD2Q15021 1401 aa26.43■■□□□ 1.82
SCAMP3-209ENST00000497470 MRS2Q9HD23 443 aa26.43■■□□□ 1.82
SCAMP3-209ENST00000497470 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
SCAMP3-209ENST00000497470 ANKRD24Q8TF21 1146 aa26.42■■□□□ 1.82
SCAMP3-209ENST00000497470 NGLY1Q96IV0 654 aa26.42■■□□□ 1.82
SCAMP3-209ENST00000497470 BTG4Q9NY30 223 aa26.42■■□□□ 1.82
SCAMP3-209ENST00000497470 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.41■■□□□ 1.82
SCAMP3-209ENST00000497470 PLCH1Q4KWH8 1693 aa26.41■■□□□ 1.82
SCAMP3-209ENST00000497470 MEX3CQ5U5Q3 659 aaKnown RBP26.4■■□□□ 1.82
SCAMP3-209ENST00000497470 UNC5CLQ8IV45 518 aa26.4■■□□□ 1.82
SCAMP3-209ENST00000497470 PNISRQ8TF01 805 aaKnown RBP26.4■■□□□ 1.82
SCAMP3-209ENST00000497470 IGSF1Q8N6C5 1336 aa26.39■■□□□ 1.82
SCAMP3-209ENST00000497470 ILDR1Q86SU0 546 aaPredicted RBP26.39■■□□□ 1.82
SCAMP3-209ENST00000497470 BCL9LQ86UU0 1499 aa26.38■■□□□ 1.81
SCAMP3-209ENST00000497470 KDRP35968 1356 aa26.38■■□□□ 1.81
SCAMP3-209ENST00000497470 CARD10Q9BWT7 1032 aa26.38■■□□□ 1.81
SCAMP3-209ENST00000497470 RGPD1P0DJD0 1748 aa26.38■■□□□ 1.81
SCAMP3-209ENST00000497470 NRAPQ86VF7 1730 aa26.38■■□□□ 1.81
SCAMP3-209ENST00000497470 ZBTB7CA1YPR0 619 aa26.37■■□□□ 1.81
SCAMP3-209ENST00000497470 EVA1CP58658 441 aa26.37■■□□□ 1.81
SCAMP3-209ENST00000497470 C8orf37Q96NL8 207 aa26.37■■□□□ 1.81
SCAMP3-209ENST00000497470 PNNQ9H307 717 aaKnown RBP26.37■■□□□ 1.81
SCAMP3-209ENST00000497470 CRB1P82279 1406 aa26.37■■□□□ 1.81
SCAMP3-209ENST00000497470 RGPD5Q99666 1765 aa26.36■■□□□ 1.81
SCAMP3-209ENST00000497470 FCHSD2O94868 740 aa26.35■■□□□ 1.81
SCAMP3-209ENST00000497470 VPS72Q15906 364 aa26.35■■□□□ 1.81
SCAMP3-209ENST00000497470 CCDC184Q52MB2 194 aa26.35■■□□□ 1.81
SCAMP3-209ENST00000497470 EYA1Q99502 592 aa26.35■■□□□ 1.81
SCAMP3-209ENST00000497470 THRAP3Q9Y2W1 955 aaKnown RBP26.35■■□□□ 1.81
SCAMP3-209ENST00000497470 WDR43Q15061 677 aaKnown RBP eCLIP26.33■■□□□ 1.81
SCAMP3-209ENST00000497470 USP21Q9UK80 565 aa26.33■■□□□ 1.81
SCAMP3-209ENST00000497470 CSB-PGBD3P0DP91 1061 aa26.32■■□□□ 1.8
SCAMP3-209ENST00000497470 NBPF6Q5VWK0 638 aa26.32■■□□□ 1.8
SCAMP3-209ENST00000497470 ZNF772Q68DY9 489 aaPredicted RBP26.32■■□□□ 1.8
SCAMP3-209ENST00000497470 NBPF4Q96M43 638 aa26.32■■□□□ 1.8
SCAMP3-209ENST00000497470 AFF2P51816 1311 aa26.32■■□□□ 1.8
SCAMP3-209ENST00000497470 TOM1L2Q6ZVM7 507 aa26.3■■□□□ 1.8
SCAMP3-209ENST00000497470 CDCA7Q9BWT1 371 aaPredicted RBP26.3■■□□□ 1.8
SCAMP3-209ENST00000497470 U2AF1L5P0DN76 240 aaPredicted RBP26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 U2AF1Q01081 240 aaKnown RBP eCLIP26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 LARP1Q6PKG0 1096 aaKnown RBP26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 LTV1Q96GA3 475 aaPredicted RBP26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 TRPC5Q9UL62 973 aaPredicted RBP26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 SPATA31A5Q5VU36 1347 aa26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 SPATA31A7Q8IWB4 1347 aa26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 ATRNO75882 1429 aa26.29■■□□□ 1.8
SCAMP3-209ENST00000497470 BARGINQ6ZT62 677 aa26.28■■□□□ 1.8
SCAMP3-209ENST00000497470 NLRP2Q9NX02 1062 aa26.28■■□□□ 1.8
SCAMP3-209ENST00000497470 SPATA31A1Q5TZJ5 1347 aa26.28■■□□□ 1.8
SCAMP3-209ENST00000497470 U2SURPO15042 1029 aaKnown RBP26.27■■□□□ 1.8
SCAMP3-209ENST00000497470 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
SCAMP3-209ENST00000497470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.27■■□□□ 1.8
SCAMP3-209ENST00000497470 NCBP3Q53F19 620 aaKnown RBP26.26■■□□□ 1.79
SCAMP3-209ENST00000497470 SULT6B1Q6IMI4 303 aa26.25■■□□□ 1.79
SCAMP3-209ENST00000497470 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
SCAMP3-209ENST00000497470 RSPH6AQ9H0K4 717 aa26.25■■□□□ 1.79
SCAMP3-209ENST00000497470 ADAMTS8Q9UP79 889 aa26.25■■□□□ 1.79
SCAMP3-209ENST00000497470 ONECUT3O60422 494 aaPredicted RBP26.22■■□□□ 1.79
SCAMP3-209ENST00000497470 NGEFQ8N5V2 710 aa26.22■■□□□ 1.79
SCAMP3-209ENST00000497470 AMOTQ4VCS5 1084 aa26.21■■□□□ 1.79
SCAMP3-209ENST00000497470 GJD4Q96KN9 370 aaPredicted RBP26.21■■□□□ 1.79
SCAMP3-209ENST00000497470 PLEKHF1Q96S99 279 aa26.21■■□□□ 1.79
SCAMP3-209ENST00000497470 DISP2A7MBM2 1401 aa26.21■■□□□ 1.79
SCAMP3-209ENST00000497470 NEFMP07197 916 aa26.2■■□□□ 1.78
SCAMP3-209ENST00000497470 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
SCAMP3-209ENST00000497470 RUNDC1Q96C34 613 aa26.2■■□□□ 1.78
SCAMP3-209ENST00000497470 RGPD2P0DJD1 1756 aa26.2■■□□□ 1.78
SCAMP3-209ENST00000497470 IL2RBP14784 551 aa26.19■■□□□ 1.78
SCAMP3-209ENST00000497470 QTRT2Q9H974 415 aaKnown RBP26.19■■□□□ 1.78
SCAMP3-209ENST00000497470 OVOS2A0A0G2JMS6 1433 aa26.17■■□□□ 1.78
SCAMP3-209ENST00000497470 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
SCAMP3-209ENST00000497470 HMOX1P09601 288 aa26.16■■□□□ 1.78
SCAMP3-209ENST00000497470 PRKAR2BP31323 418 aa26.16■■□□□ 1.78
SCAMP3-209ENST00000497470 AEBP1Q8IUX7 1158 aa26.16■■□□□ 1.78
SCAMP3-209ENST00000497470 PARP4Q9UKK3 1724 aaKnown RBP26.15■■□□□ 1.78
SCAMP3-209ENST00000497470 FAM9BQ8IZU0 186 aa26.15■■□□□ 1.78
SCAMP3-209ENST00000497470 RBM6P78332 1123 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms