RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 USP17L22D6RA61 530 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 USP17L17D6RBQ6 530 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 USP17L19D6RCP7 530 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 USP17L20D6RJB6 530 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 USP17L24Q0WX57 530 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
ZNF561-221ENST00000497409 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 KCTD12Q96CX2 325 aaKnown RBP9.98□□□□□ -0.81
ZNF561-221ENST00000497409 UNC93B1Q9H1C4 597 aa9.98□□□□□ -0.81
ZNF561-221ENST00000497409 LZTS3O60299 673 aaPredicted RBP9.97□□□□□ -0.81
ZNF561-221ENST00000497409 CRTC2Q53ET0 693 aaPredicted RBP9.97□□□□□ -0.81
ZNF561-221ENST00000497409 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
ZNF561-221ENST00000497409 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
ZNF561-221ENST00000497409 CCDC24Q8N4L8 307 aa9.97□□□□□ -0.81
ZNF561-221ENST00000497409 MTRQ99707 1265 aa9.97□□□□□ -0.81
ZNF561-221ENST00000497409 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
ZNF561-221ENST00000497409 ATP5J2-PTCD1G3V325 749 aa9.96□□□□□ -0.82
ZNF561-221ENST00000497409 RASA1P20936 1047 aa9.96□□□□□ -0.82
ZNF561-221ENST00000497409 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
ZNF561-221ENST00000497409 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
ZNF561-221ENST00000497409 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
ZNF561-221ENST00000497409 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
ZNF561-221ENST00000497409 PTK7Q13308 1070 aa9.95□□□□□ -0.82
ZNF561-221ENST00000497409 MAP7D1Q3KQU3 841 aa9.95□□□□□ -0.82
ZNF561-221ENST00000497409 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
ZNF561-221ENST00000497409 GNEQ9Y223 722 aaKnown RBP9.95□□□□□ -0.82
ZNF561-221ENST00000497409 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
ZNF561-221ENST00000497409 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
ZNF561-221ENST00000497409 SND1Q7KZF4 910 aaKnown RBP eCLIP9.94□□□□□ -0.82
ZNF561-221ENST00000497409 DZIP3Q86Y13 1208 aaKnown RBP9.94□□□□□ -0.82
ZNF561-221ENST00000497409 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
ZNF561-221ENST00000497409 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 EML3Q32P44 896 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 TJAP1Q5JTD0 557 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 CARD14Q9BXL6 1004 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
ZNF561-221ENST00000497409 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
ZNF561-221ENST00000497409 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
ZNF561-221ENST00000497409 MAGEB6P1A0A0J9YX57 407 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 POTEMA6NI47 508 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 PHLDB3Q6NSJ2 640 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 ANKMY2Q8IV38 441 aa9.91□□□□□ -0.82
ZNF561-221ENST00000497409 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
ZNF561-221ENST00000497409 FOXD4L5Q5VV16 416 aaPredicted RBP9.9□□□□□ -0.82
ZNF561-221ENST00000497409 TRIM50Q86XT4 487 aa9.9□□□□□ -0.82
ZNF561-221ENST00000497409 OGFOD1Q8N543 542 aa9.9□□□□□ -0.82
ZNF561-221ENST00000497409 FOXD4L4Q8WXT5 416 aaPredicted RBP9.9□□□□□ -0.82
ZNF561-221ENST00000497409 BAP1Q92560 729 aa9.9□□□□□ -0.82
ZNF561-221ENST00000497409 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
ZNF561-221ENST00000497409 CLDN10P78369 228 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
ZNF561-221ENST00000497409 CLP1Q92989 425 aaKnown RBP9.89□□□□□ -0.83
ZNF561-221ENST00000497409 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 NOD1Q9Y239 953 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
ZNF561-221ENST00000497409 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
ZNF561-221ENST00000497409 SSFA2P28290 1259 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 ATP1A2P50993 1020 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 PTPN5P54829 565 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 DPYDQ12882 1025 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 AGERQ15109 404 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 TXNDC2Q86VQ3 553 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
ZNF561-221ENST00000497409 FOXJ1Q92949 421 aa9.88□□□□□ -0.83
ZNF561-221ENST00000497409 ZNF594Q96JF6 807 aaPredicted RBP9.88□□□□□ -0.83
ZNF561-221ENST00000497409 DNAAF2Q9NVR5 837 aaKnown RBP9.88□□□□□ -0.83
ZNF561-221ENST00000497409 S1PR4O95977 384 aa9.87□□□□□ -0.83
ZNF561-221ENST00000497409 ZNF511Q8NB15 262 aa9.87□□□□□ -0.83
ZNF561-221ENST00000497409 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
ZNF561-221ENST00000497409 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
ZNF561-221ENST00000497409 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
ZNF561-221ENST00000497409 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
ZNF561-221ENST00000497409 SWI5Q1ZZU3 235 aa9.85□□□□□ -0.83
ZNF561-221ENST00000497409 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
ZNF561-221ENST00000497409 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
ZNF561-221ENST00000497409 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
ZNF561-221ENST00000497409 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
ZNF561-221ENST00000497409 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
ZNF561-221ENST00000497409 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
ZNF561-221ENST00000497409 C1QTNF2Q9BXJ5 285 aa9.84□□□□□ -0.83
ZNF561-221ENST00000497409 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
ZNF561-221ENST00000497409 DKK1O94907 266 aa9.83□□□□□ -0.84
ZNF561-221ENST00000497409 GTF2IP78347 998 aa9.83□□□□□ -0.84
ZNF561-221ENST00000497409 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
ZNF561-221ENST00000497409 SIX5Q8N196 739 aa9.83□□□□□ -0.84
ZNF561-221ENST00000497409 ESPNB1AK53 854 aa9.82□□□□□ -0.84
ZNF561-221ENST00000497409 EIF4G1Q04637 1599 aaKnown RBP9.81□□□□□ -0.84
ZNF561-221ENST00000497409 RBM25P49756 843 aaKnown RBP9.81□□□□□ -0.84
ZNF561-221ENST00000497409 TRMT44Q8IYL2 757 aaKnown RBP9.81□□□□□ -0.84
ZNF561-221ENST00000497409 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
ZNF561-221ENST00000497409 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
ZNF561-221ENST00000497409 SEC13P55735 322 aa9.8□□□□□ -0.84
ZNF561-221ENST00000497409 SH3BP2P78314 561 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms