RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.28■■□□□ 1.48
SMC4-226ENST00000497311 PARD3Q8TEW0 1356 aa24.28■■□□□ 1.48
SMC4-226ENST00000497311 MON2Q7Z3U7 1717 aa24.27■■□□□ 1.48
SMC4-226ENST00000497311 R3HDM1Q15032 1099 aaKnown RBP24.27■■□□□ 1.48
SMC4-226ENST00000497311 DDB1Q16531 1140 aa24.26■■□□□ 1.47
SMC4-226ENST00000497311 HDGFL2Q7Z4V5 671 aaPredicted RBP24.26■■□□□ 1.47
SMC4-226ENST00000497311 CSB-PGBD3P0DP91 1061 aa24.25■■□□□ 1.47
SMC4-226ENST00000497311 SLC12A5Q9H2X9 1139 aa24.25■■□□□ 1.47
SMC4-226ENST00000497311 LRP5O75197 1615 aa24.24■■□□□ 1.47
SMC4-226ENST00000497311 PUS7Q96PZ0 661 aaKnown RBP24.24■■□□□ 1.47
SMC4-226ENST00000497311 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
SMC4-226ENST00000497311 USP31Q70CQ4 1352 aa24.24■■□□□ 1.47
SMC4-226ENST00000497311 CD163L1Q9NR16 1453 aa24.24■■□□□ 1.47
SMC4-226ENST00000497311 NFAT5O94916 1531 aa24.24■■□□□ 1.47
SMC4-226ENST00000497311 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
SMC4-226ENST00000497311 CARD10Q9BWT7 1032 aa24.23■■□□□ 1.47
SMC4-226ENST00000497311 OVOS2A0A0G2JMS6 1433 aa24.23■■□□□ 1.47
SMC4-226ENST00000497311 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
SMC4-226ENST00000497311 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
SMC4-226ENST00000497311 NME9Q86XW9 330 aa24.22■■□□□ 1.47
SMC4-226ENST00000497311 TERF2IPQ9NYB0 399 aa24.22■■□□□ 1.47
SMC4-226ENST00000497311 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
SMC4-226ENST00000497311 ST20-MTHFSA0A0A6YYL1 179 aa24.19■■□□□ 1.46
SMC4-226ENST00000497311 ABCC6O95255 1503 aa24.19■■□□□ 1.46
SMC4-226ENST00000497311 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
SMC4-226ENST00000497311 PEAK1Q9H792 1746 aa24.18■■□□□ 1.46
SMC4-226ENST00000497311 SLC24A1O60721 1099 aa24.18■■□□□ 1.46
SMC4-226ENST00000497311 WNK3Q9BYP7 1800 aa24.18■■□□□ 1.46
SMC4-226ENST00000497311 USP54Q70EL1 1684 aa24.18■■□□□ 1.46
SMC4-226ENST00000497311 RREB1Q92766 1687 aa24.18■■□□□ 1.46
SMC4-226ENST00000497311 A0A1W2PP64 1363 aa24.17■■□□□ 1.46
SMC4-226ENST00000497311 NBPF14Q5TI25 921 aa24.17■■□□□ 1.46
SMC4-226ENST00000497311 TESK2Q96S53 571 aa24.17■■□□□ 1.46
SMC4-226ENST00000497311 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
SMC4-226ENST00000497311 MARCH10Q8NA82 808 aaPredicted RBP24.16■■□□□ 1.46
SMC4-226ENST00000497311 EXOC5O00471 708 aa24.15■■□□□ 1.46
SMC4-226ENST00000497311 NUP188Q5SRE5 1749 aa24.14■■□□□ 1.45
SMC4-226ENST00000497311 BCL11BQ9C0K0 894 aaPredicted RBP24.14■■□□□ 1.45
SMC4-226ENST00000497311 SBF2Q86WG5 1849 aa24.14■■□□□ 1.45
SMC4-226ENST00000497311 NINLQ9Y2I6 1382 aa24.14■■□□□ 1.45
SMC4-226ENST00000497311 PLSCR1O15162 318 aa24.13■■□□□ 1.45
SMC4-226ENST00000497311 ERBB3P21860 1342 aa24.12■■□□□ 1.45
SMC4-226ENST00000497311 LTN1O94822 1766 aa24.11■■□□□ 1.45
SMC4-226ENST00000497311 BCL9O00512 1426 aa24.11■■□□□ 1.45
SMC4-226ENST00000497311 NLRP2Q9NX02 1062 aa24.11■■□□□ 1.45
SMC4-226ENST00000497311 PTF1AQ7RTS3 328 aa24.09■■□□□ 1.45
SMC4-226ENST00000497311 ANKRD24Q8TF21 1146 aa24.09■■□□□ 1.45
SMC4-226ENST00000497311 RGPD3A6NKT7 1758 aaPredicted RBP24.07■■□□□ 1.44
SMC4-226ENST00000497311 RGPD4Q7Z3J3 1758 aa24.07■■□□□ 1.44
SMC4-226ENST00000497311 TNS2Q63HR2 1409 aa24.07■■□□□ 1.44
SMC4-226ENST00000497311 IL2RBP14784 551 aa24.06■■□□□ 1.44
SMC4-226ENST00000497311 COG3Q96JB2 828 aa24.06■■□□□ 1.44
SMC4-226ENST00000497311 TMF1P82094 1093 aa24.05■■□□□ 1.44
SMC4-226ENST00000497311 USP47Q96K76 1375 aa24.04■■□□□ 1.44
SMC4-226ENST00000497311 IP6K1Q92551 441 aa24.04■■□□□ 1.44
SMC4-226ENST00000497311 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
SMC4-226ENST00000497311 PROM2Q8N271 834 aa24.01■■□□□ 1.43
SMC4-226ENST00000497311 KCNQ2O43526 872 aa23.99■■□□□ 1.43
SMC4-226ENST00000497311 LTV1Q96GA3 475 aaPredicted RBP23.99■■□□□ 1.43
SMC4-226ENST00000497311 AMPHP49418 695 aa23.98■■□□□ 1.43
SMC4-226ENST00000497311 CDCA8Q53HL2 280 aa23.98■■□□□ 1.43
SMC4-226ENST00000497311 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
SMC4-226ENST00000497311 SPON1Q9HCB6 807 aa23.98■■□□□ 1.43
SMC4-226ENST00000497311 ANO8Q9HCE9 1232 aaPredicted RBP23.98■■□□□ 1.43
SMC4-226ENST00000497311 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
SMC4-226ENST00000497311 TXNRD1Q16881 649 aa23.97■■□□□ 1.43
SMC4-226ENST00000497311 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
SMC4-226ENST00000497311 FBLN1P23142 703 aa23.96■■□□□ 1.43
SMC4-226ENST00000497311 HOXC9P31274 260 aa23.96■■□□□ 1.43
SMC4-226ENST00000497311 FYB1O15117 783 aa23.94■■□□□ 1.42
SMC4-226ENST00000497311 GGNBP2Q9H3C7 697 aa23.94■■□□□ 1.42
SMC4-226ENST00000497311 NHSQ6T4R5 1651 aa23.94■■□□□ 1.42
SMC4-226ENST00000497311 FAM208AQ9UK61 1670 aaKnown RBP23.94■■□□□ 1.42
SMC4-226ENST00000497311 KAT6BQ8WYB5 2073 aa23.94■■□□□ 1.42
SMC4-226ENST00000497311 STK32BQ9NY57 414 aa23.93■■□□□ 1.42
SMC4-226ENST00000497311 PPP1R1BQ9UD71 204 aaPredicted RBP23.93■■□□□ 1.42
SMC4-226ENST00000497311 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
SMC4-226ENST00000497311 RRS1Q15050 365 aaKnown RBP23.91■■□□□ 1.42
SMC4-226ENST00000497311 DDX54Q8TDD1 881 aaKnown RBP23.91■■□□□ 1.42
SMC4-226ENST00000497311 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
SMC4-226ENST00000497311 RTL1A6NKG5 1358 aa23.9■■□□□ 1.42
SMC4-226ENST00000497311 SLC15A2Q16348 729 aa23.89■■□□□ 1.41
SMC4-226ENST00000497311 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
SMC4-226ENST00000497311 CASZ1Q86V15 1759 aa23.87■■□□□ 1.41
SMC4-226ENST00000497311 BTAF1O14981 1849 aa23.87■■□□□ 1.41
SMC4-226ENST00000497311 ZBTB7AO95365 584 aa23.85■■□□□ 1.41
SMC4-226ENST00000497311 RGPD2P0DJD1 1756 aa23.85■■□□□ 1.41
SMC4-226ENST00000497311 ZCRB1Q8TBF4 217 aaKnown RBP23.84■■□□□ 1.41
SMC4-226ENST00000497311 KIF20BQ96Q89 1820 aa23.84■■□□□ 1.41
SMC4-226ENST00000497311 SMG6Q86US8 1419 aaKnown RBP23.84■■□□□ 1.41
SMC4-226ENST00000497311 NBPF6Q5VWK0 638 aa23.83■■□□□ 1.41
SMC4-226ENST00000497311 NBPF4Q96M43 638 aa23.83■■□□□ 1.41
SMC4-226ENST00000497311 CARD14Q9BXL6 1004 aa23.83■■□□□ 1.41
SMC4-226ENST00000497311 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
SMC4-226ENST00000497311 ATF5Q9Y2D1 282 aaPredicted RBP23.81■■□□□ 1.4
SMC4-226ENST00000497311 NSD3Q9BZ95 1437 aa23.81■■□□□ 1.4
SMC4-226ENST00000497311 INSRP06213 1382 aa23.8■■□□□ 1.4
SMC4-226ENST00000497311 MEGF6O75095 1541 aa23.8■■□□□ 1.4
SMC4-226ENST00000497311 MYOM1P52179 1685 aa23.8■■□□□ 1.4
SMC4-226ENST00000497311 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms