RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
TRAPPC3-207ENST00000497251 CARD10Q9BWT7 1032 aa23.99■■□□□ 1.43
TRAPPC3-207ENST00000497251 BCL11BQ9C0K0 894 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC3-207ENST00000497251 PIK3C2AO00443 1686 aa23.97■■□□□ 1.43
TRAPPC3-207ENST00000497251 KTN1Q86UP2 1357 aaKnown RBP23.97■■□□□ 1.43
TRAPPC3-207ENST00000497251 AXIN2Q9Y2T1 843 aa23.97■■□□□ 1.43
TRAPPC3-207ENST00000497251 COL18A1P39060 1754 aa23.96■■□□□ 1.43
TRAPPC3-207ENST00000497251 RREB1Q92766 1687 aa23.96■■□□□ 1.43
TRAPPC3-207ENST00000497251 ABCC6O95255 1503 aa23.96■■□□□ 1.43
TRAPPC3-207ENST00000497251 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
TRAPPC3-207ENST00000497251 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
TRAPPC3-207ENST00000497251 SLC24A1O60721 1099 aa23.94■■□□□ 1.42
TRAPPC3-207ENST00000497251 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
TRAPPC3-207ENST00000497251 CSB-PGBD3P0DP91 1061 aa23.93■■□□□ 1.42
TRAPPC3-207ENST00000497251 AKAP12Q02952 1782 aa23.93■■□□□ 1.42
TRAPPC3-207ENST00000497251 EXOC5O00471 708 aa23.92■■□□□ 1.42
TRAPPC3-207ENST00000497251 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
TRAPPC3-207ENST00000497251 SPON1Q9HCB6 807 aa23.92■■□□□ 1.42
TRAPPC3-207ENST00000497251 PEAK1Q9H792 1746 aa23.92■■□□□ 1.42
TRAPPC3-207ENST00000497251 RGPD3A6NKT7 1758 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC3-207ENST00000497251 RGPD4Q7Z3J3 1758 aa23.91■■□□□ 1.42
TRAPPC3-207ENST00000497251 NUP188Q5SRE5 1749 aa23.9■■□□□ 1.42
TRAPPC3-207ENST00000497251 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC3-207ENST00000497251 LRRC37A3O60309 1634 aa23.89■■□□□ 1.42
TRAPPC3-207ENST00000497251 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC3-207ENST00000497251 KCNQ2O43526 872 aa23.88■■□□□ 1.41
TRAPPC3-207ENST00000497251 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
TRAPPC3-207ENST00000497251 NFAT5O94916 1531 aa23.88■■□□□ 1.41
TRAPPC3-207ENST00000497251 SBF2Q86WG5 1849 aa23.86■■□□□ 1.41
TRAPPC3-207ENST00000497251 SOX12O15370 315 aa23.85■■□□□ 1.41
TRAPPC3-207ENST00000497251 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 DCAF8L1A6NGE4 600 aa23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 PPP1R1BQ9UD71 204 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 MON2Q7Z3U7 1717 aa23.83■■□□□ 1.41
TRAPPC3-207ENST00000497251 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.4
TRAPPC3-207ENST00000497251 ERBB3P21860 1342 aa23.83■■□□□ 1.4
TRAPPC3-207ENST00000497251 NINLQ9Y2I6 1382 aa23.82■■□□□ 1.4
TRAPPC3-207ENST00000497251 USP54Q70EL1 1684 aa23.82■■□□□ 1.4
TRAPPC3-207ENST00000497251 WNK3Q9BYP7 1800 aa23.82■■□□□ 1.4
TRAPPC3-207ENST00000497251 TNS2Q63HR2 1409 aa23.8■■□□□ 1.4
TRAPPC3-207ENST00000497251 CD163L1Q9NR16 1453 aa23.8■■□□□ 1.4
TRAPPC3-207ENST00000497251 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 IL2RBP14784 551 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 NME9Q86XW9 330 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 PROM2Q8N271 834 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 NLRP2Q9NX02 1062 aa23.79■■□□□ 1.4
TRAPPC3-207ENST00000497251 TXNRD1Q16881 649 aa23.78■■□□□ 1.4
TRAPPC3-207ENST00000497251 STK32BQ9NY57 414 aa23.77■■□□□ 1.4
TRAPPC3-207ENST00000497251 PTF1AQ7RTS3 328 aa23.75■■□□□ 1.39
TRAPPC3-207ENST00000497251 ANKRD24Q8TF21 1146 aa23.75■■□□□ 1.39
TRAPPC3-207ENST00000497251 ANO8Q9HCE9 1232 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC3-207ENST00000497251 SLC15A2Q16348 729 aa23.73■■□□□ 1.39
TRAPPC3-207ENST00000497251 IP6K1Q92551 441 aa23.73■■□□□ 1.39
TRAPPC3-207ENST00000497251 A0A1W2PP64 1363 aa23.73■■□□□ 1.39
TRAPPC3-207ENST00000497251 TESK2Q96S53 571 aa23.71■■□□□ 1.39
TRAPPC3-207ENST00000497251 COG3Q96JB2 828 aa23.69■■□□□ 1.38
TRAPPC3-207ENST00000497251 ST20-MTHFSA0A0A6YYL1 179 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 YY1P25490 414 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 MTFR1LQ9H019 292 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 LTN1O94822 1766 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 NHSQ6T4R5 1651 aa23.67■■□□□ 1.38
TRAPPC3-207ENST00000497251 KAT6BQ8WYB5 2073 aa23.65■■□□□ 1.38
TRAPPC3-207ENST00000497251 ZBTB7AO95365 584 aa23.64■■□□□ 1.37
TRAPPC3-207ENST00000497251 PTGER2P43116 358 aa23.64■■□□□ 1.37
TRAPPC3-207ENST00000497251 SLC27A3Q5K4L6 730 aa23.64■■□□□ 1.37
TRAPPC3-207ENST00000497251 ACSBG1Q96GR2 724 aa23.63■■□□□ 1.37
TRAPPC3-207ENST00000497251 ANKRD36BQ8N2N9 1353 aa23.63■■□□□ 1.37
TRAPPC3-207ENST00000497251 HMGB2P26583 209 aaKnown RBP23.62■■□□□ 1.37
TRAPPC3-207ENST00000497251 CDCA8Q53HL2 280 aa23.62■■□□□ 1.37
TRAPPC3-207ENST00000497251 FAM208AQ9UK61 1670 aaKnown RBP23.62■■□□□ 1.37
TRAPPC3-207ENST00000497251 AMPHP49418 695 aa23.61■■□□□ 1.37
TRAPPC3-207ENST00000497251 TMF1P82094 1093 aa23.61■■□□□ 1.37
TRAPPC3-207ENST00000497251 PDGFDQ9GZP0 370 aaPredicted RBP23.61■■□□□ 1.37
TRAPPC3-207ENST00000497251 CGNL1Q0VF96 1302 aa23.6■■□□□ 1.37
TRAPPC3-207ENST00000497251 HOXC9P31274 260 aa23.6■■□□□ 1.37
TRAPPC3-207ENST00000497251 RTL1A6NKG5 1358 aa23.6■■□□□ 1.37
TRAPPC3-207ENST00000497251 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
TRAPPC3-207ENST00000497251 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
TRAPPC3-207ENST00000497251 ATF5Q9Y2D1 282 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC3-207ENST00000497251 DDX54Q8TDD1 881 aaKnown RBP23.57■■□□□ 1.36
TRAPPC3-207ENST00000497251 SGIP1Q9BQI5 828 aa23.57■■□□□ 1.36
TRAPPC3-207ENST00000497251 ZCRB1Q8TBF4 217 aaKnown RBP23.56■■□□□ 1.36
TRAPPC3-207ENST00000497251 LTV1Q96GA3 475 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC3-207ENST00000497251 SYT17Q9BSW7 474 aa23.56■■□□□ 1.36
TRAPPC3-207ENST00000497251 BTAF1O14981 1849 aa23.55■■□□□ 1.36
TRAPPC3-207ENST00000497251 KIF24Q5T7B8 1368 aa23.54■■□□□ 1.36
TRAPPC3-207ENST00000497251 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
TRAPPC3-207ENST00000497251 FYB1O15117 783 aa23.54■■□□□ 1.36
TRAPPC3-207ENST00000497251 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC3-207ENST00000497251 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
TRAPPC3-207ENST00000497251 ARXQ96QS3 562 aa23.53■■□□□ 1.36
TRAPPC3-207ENST00000497251 FHDC1Q9C0D6 1143 aaPredicted RBP23.53■■□□□ 1.36
TRAPPC3-207ENST00000497251 LRRC4BQ9NT99 713 aa23.53■■□□□ 1.36
TRAPPC3-207ENST00000497251 PAPPAQ13219 1627 aa23.52■■□□□ 1.36
TRAPPC3-207ENST00000497251 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
TRAPPC3-207ENST00000497251 AKT1S1Q96B36 256 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms