RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
SGIP1-214ENST00000497055 AK7Q96M32 723 aa7.67□□□□□ -1.18
SGIP1-214ENST00000497055 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
SGIP1-214ENST00000497055 PZPP20742 1482 aa7.67□□□□□ -1.18
SGIP1-214ENST00000497055 AHDC1Q5TGY3 1603 aaPredicted RBP7.67□□□□□ -1.18
SGIP1-214ENST00000497055 LTKP29376 864 aa7.66□□□□□ -1.18
SGIP1-214ENST00000497055 RANGAP1P46060 587 aaPredicted RBP7.66□□□□□ -1.18
SGIP1-214ENST00000497055 TXNDC2Q86VQ3 553 aa7.66□□□□□ -1.18
SGIP1-214ENST00000497055 ZFRQ96KR1 1074 aaKnown RBP7.66□□□□□ -1.18
SGIP1-214ENST00000497055 PPP1R1BQ9UD71 204 aaPredicted RBP7.66□□□□□ -1.18
SGIP1-214ENST00000497055 SPAG9O60271 1321 aaKnown RBP7.66□□□□□ -1.18
SGIP1-214ENST00000497055 A2MP01023 1474 aa7.66□□□□□ -1.18
SGIP1-214ENST00000497055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.65□□□□□ -1.18
SGIP1-214ENST00000497055 RCCD1A6NED2 376 aa7.65□□□□□ -1.18
SGIP1-214ENST00000497055 PRKCSHP14314 528 aaPredicted RBP7.65□□□□□ -1.18
SGIP1-214ENST00000497055 HDGFP51858 240 aaKnown RBP7.65□□□□□ -1.18
SGIP1-214ENST00000497055 PRDM15P57071 1507 aaPredicted RBP7.65□□□□□ -1.18
SGIP1-214ENST00000497055 DIP2AQ14689 1571 aa7.65□□□□□ -1.18
SGIP1-214ENST00000497055 SAMD9Q5K651 1589 aa7.65□□□□□ -1.18
SGIP1-214ENST00000497055 ADGBQ8N7X0 1667 aa7.65□□□□□ -1.18
SGIP1-214ENST00000497055 PHOX2BQ99453 314 aa7.65□□□□□ -1.18
SGIP1-214ENST00000497055 PLXNC1O60486 1568 aa7.64□□□□□ -1.19
SGIP1-214ENST00000497055 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
SGIP1-214ENST00000497055 DNAJB2P25686 324 aa7.64□□□□□ -1.19
SGIP1-214ENST00000497055 SAMD9LQ8IVG5 1584 aa7.63□□□□□ -1.19
SGIP1-214ENST00000497055 ATRNO75882 1429 aa7.63□□□□□ -1.19
SGIP1-214ENST00000497055 TRIM66O15016 1216 aa7.63□□□□□ -1.19
SGIP1-214ENST00000497055 BAG6P46379 1132 aa7.63□□□□□ -1.19
SGIP1-214ENST00000497055 WNT2BQ93097 391 aa7.63□□□□□ -1.19
SGIP1-214ENST00000497055 ABCC3O15438 1527 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 PRELPP51888 382 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 C14orf37Q86TY3 774 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 ANKK1Q8NFD2 765 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 TMEM134Q9H6X4 195 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 EID1Q9Y6B2 187 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 CAMTA1Q9Y6Y1 1673 aa7.62□□□□□ -1.19
SGIP1-214ENST00000497055 KDM5AP29375 1690 aaKnown RBP7.61□□□□□ -1.19
SGIP1-214ENST00000497055 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
SGIP1-214ENST00000497055 SAMD7Q7Z3H4 446 aa7.61□□□□□ -1.19
SGIP1-214ENST00000497055 SLC26A8Q96RN1 970 aa7.61□□□□□ -1.19
SGIP1-214ENST00000497055 DAXXQ9UER7 740 aaPredicted RBP7.61□□□□□ -1.19
SGIP1-214ENST00000497055 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
SGIP1-214ENST00000497055 NCOA2Q15596 1464 aa7.61□□□□□ -1.19
SGIP1-214ENST00000497055 NINLQ9Y2I6 1382 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 WASHC2CQ9Y4E1 1318 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 SOWAHBA6NEL2 793 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 AMHR2Q16671 573 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 SWT1Q5T5J6 900 aaKnown RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 BRINP3Q76B58 766 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 LRRC59Q96AG4 307 aaKnown RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 KCTD12Q96CX2 325 aaKnown RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 CDC42BPBQ9Y5S2 1711 aa7.6□□□□□ -1.19
SGIP1-214ENST00000497055 NKTRP30414 1462 aaKnown RBP7.6□□□□□ -1.19
SGIP1-214ENST00000497055 PNPLA6Q8IY17 1366 aa7.59□□□□□ -1.19
SGIP1-214ENST00000497055 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
SGIP1-214ENST00000497055 MDM2Q00987 491 aaPredicted RBP7.59□□□□□ -1.19
SGIP1-214ENST00000497055 MMRN1Q13201 1228 aa7.59□□□□□ -1.19
SGIP1-214ENST00000497055 NLRP7Q8WX94 980 aa7.59□□□□□ -1.19
SGIP1-214ENST00000497055 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
SGIP1-214ENST00000497055 SETD5Q9C0A6 1442 aa7.59□□□□□ -1.19
SGIP1-214ENST00000497055 UNC13BO14795 1591 aa7.59□□□□□ -1.2
SGIP1-214ENST00000497055 ATF3P18847 181 aa7.58□□□□□ -1.2
SGIP1-214ENST00000497055 CLCN1P35523 988 aa7.58□□□□□ -1.2
SGIP1-214ENST00000497055 HNRNPMP52272 730 aaKnown RBP eCLIP7.58□□□□□ -1.2
SGIP1-214ENST00000497055 THSD4Q6ZMP0 1018 aa7.58□□□□□ -1.2
SGIP1-214ENST00000497055 SLF2Q8IX21 1173 aa7.58□□□□□ -1.2
SGIP1-214ENST00000497055 FNBP4Q8N3X1 1017 aaPredicted RBP7.58□□□□□ -1.2
SGIP1-214ENST00000497055 RNF166Q96A37 237 aaPredicted RBP7.58□□□□□ -1.2
SGIP1-214ENST00000497055 GJD4Q96KN9 370 aaPredicted RBP7.58□□□□□ -1.2
SGIP1-214ENST00000497055 MAST1Q9Y2H9 1570 aa7.58□□□□□ -1.2
SGIP1-214ENST00000497055 KIF3BO15066 747 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 BCAMP50895 628 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 PDE4DQ08499 809 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 COL13A1Q5TAT6 717 aaPredicted RBP7.57□□□□□ -1.2
SGIP1-214ENST00000497055 TNS4Q8IZW8 715 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
SGIP1-214ENST00000497055 ARHGAP23Q9P227 1491 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 CLIP1P30622 1438 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 TROQ12816 1431 aaPredicted RBP7.56□□□□□ -1.2
SGIP1-214ENST00000497055 TTLL12Q14166 644 aaPredicted RBP7.56□□□□□ -1.2
SGIP1-214ENST00000497055 RSPH4AQ5TD94 716 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 TSR3Q9UJK0 312 aaKnown RBP7.56□□□□□ -1.2
SGIP1-214ENST00000497055 SLIT1O75093 1534 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 SYCP2Q9BX26 1530 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
SGIP1-214ENST00000497055 PPP4CP60510 307 aa7.55□□□□□ -1.2
SGIP1-214ENST00000497055 SULF1Q8IWU6 871 aa7.55□□□□□ -1.2
SGIP1-214ENST00000497055 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
SGIP1-214ENST00000497055 SPON1Q9HCB6 807 aa7.55□□□□□ -1.2
SGIP1-214ENST00000497055 CAMSAP2Q08AD1 1489 aa7.55□□□□□ -1.2
SGIP1-214ENST00000497055 INO80Q9ULG1 1556 aaPredicted RBP7.54□□□□□ -1.2
SGIP1-214ENST00000497055 RNF40O75150 1001 aa7.54□□□□□ -1.2
SGIP1-214ENST00000497055 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
SGIP1-214ENST00000497055 REPIN1Q9BWE0 567 aaKnown RBP7.54□□□□□ -1.2
SGIP1-214ENST00000497055 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms